Genetic structure and domestication history of the grape
Myles, Sean, Boyko, Adam R, Owens, Christopher L, Brown, Patrick J, Grassi, Fabrizio, Aradhya, Mallikarjuna K, Prins, Bernard, Reynolds, Andy, Chia, Jer-Ming, Ware, Doreen, Bustamante, Carlos D, Buckler, Edward S
Published in Proceedings of the National Academy of Sciences - PNAS (01.03.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (01.03.2011)
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Journal Article
First-Generation Haplotype Map of Maize
Gore, Michael A, Chia, Jer-Ming, Elshire, Robert J, Sun, Qi, Ersoz, Elhan S, Hurwitz, Bonnie L, Peiffer, Jason A, McMullen, Michael D, Grills, George S, Ross-Ibarra, Jeffrey, Ware, Doreen H, Buckler, Edward S
Published in Science (American Association for the Advancement of Science) (20.11.2009)
Published in Science (American Association for the Advancement of Science) (20.11.2009)
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Journal Article
Rapid Genomic Characterization of the Genus Vitis
Myles, Sean, Chia, Jer-Ming, Hurwitz, Bonnie, Simon, Charles, Zhong, Gan Yuan, Buckler, Edward, Ware, Doreen
Published in PloS one (13.01.2010)
Published in PloS one (13.01.2010)
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Journal Article
Maize HapMap2 identifies extant variation from a genome in flux
Chia, Jer-Ming, Song, Chi, Bradbury, Peter J, Costich, Denise, de Leon, Natalia, Doebley, John, Elshire, Robert J, Gaut, Brandon, Geller, Laura, Glaubitz, Jeffrey C, Gore, Michael, Guill, Kate E, Holland, Jim, Hufford, Matthew B, Lai, Jinsheng, Li, Meng, Liu, Xin, Lu, Yanli, McCombie, Richard, Nelson, Rebecca, Poland, Jesse, Prasanna, Boddupalli M, Pyhäjärvi, Tanja, Rong, Tingzhao, Sekhon, Rajandeep S, Sun, Qi, Tenaillon, Maud I, Tian, Feng, Wang, Jun, Xu, Xun, Zhang, Zhiwu, Kaeppler, Shawn M, Ross-Ibarra, Jeffrey, McMullen, Michael D, Buckler, Edward S, Zhang, Gengyun, Xu, Yunbi, Ware, Doreen
Published in Nature genetics (01.07.2012)
Published in Nature genetics (01.07.2012)
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Journal Article
A genome-wide characterization of microRNA genes in maize
Zhang, Lifang, Chia, Jer-Ming, Kumari, Sunita, Stein, Joshua C, Liu, Zhijie, Narechania, Apurva, Maher, Christopher A, Guill, Katherine, McMullen, Michael D, Ware, Doreen
Published in PLoS genetics (01.11.2009)
Published in PLoS genetics (01.11.2009)
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Journal Article
Fugu Genome Analysis Provides Evidence for a Whole-Genome Duplication Early During the Evolution of Ray-Finned Fishes
Christoffels, Alan, Koh, Esther G. L., Chia, Jer-ming, Brenner, Sydney, Aparicio, Samuel, Venkatesh, Byrappa
Published in Molecular biology and evolution (01.06.2004)
Published in Molecular biology and evolution (01.06.2004)
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Journal Article
Comparative population genomics of maize domestication and improvement
Hufford, Matthew B, Xu, Xun, van Heerwaarden, Joost, Pyhäjärvi, Tanja, Chia, Jer-Ming, Cartwright, Reed A, Elshire, Robert J, Glaubitz, Jeffrey C, Guill, Kate E, Kaeppler, Shawn M, Lai, Jinsheng, Morrell, Peter L, Shannon, Laura M, Song, Chi, Springer, Nathan M, Swanson-Wagner, Ruth A, Tiffin, Peter, Wang, Jun, Zhang, Gengyun, Doebley, John, McMullen, Michael D, Ware, Doreen, Buckler, Edward S, Yang, Shuang, Ross-Ibarra, Jeffrey
Published in Nature genetics (01.07.2012)
Published in Nature genetics (01.07.2012)
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Journal Article
Biopipe: a flexible framework for protocol-based bioinformatics analysis
Hoon, Shawn, Ratnapu, Kiran Kumar, Chia, Jer-Ming, Kumarasamy, Balamurugan, Juguang, Xiao, Clamp, Michele, Stabenau, Arne, Potter, Simon, Clarke, Laura, Stupka, Elia
Published in Genome research (01.08.2003)
Published in Genome research (01.08.2003)
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Journal Article
A human in vitro model system for investigating genome-wide host responses to SARS coronavirus infection
Ng, Lisa F P, Hibberd, Martin L, Ooi, Eng-Eong, Tang, Kin-Fai, Neo, Soek-Ying, Tan, Jenny, Murthy, Karuturi R Krishna, Vega, Vinsensius B, Chia, Jer-Ming, Liu, Edison T, Ren, Ee-Chee
Published in BMC infectious diseases (09.09.2004)
Published in BMC infectious diseases (09.09.2004)
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Journal Article
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica
Schatz, Michael C, Maron, Lyza G, Stein, Joshua C, Hernandez Wences, Alejandro, Gurtowski, James, Biggers, Eric, Lee, Hayan, Kramer, Melissa, Antoniou, Eric, Ghiban, Elena, Wright, Mark H, Chia, Jer-ming, Ware, Doreen, McCouch, Susan R, McCombie, W Richard
Published in Genome biology (01.01.2014)
Published in Genome biology (01.01.2014)
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Journal Article
Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes
Aparicio, Samuel, Chapman, Jarrod, Stupka, Elia, Putnam, Nik, Chia, Jer-ming, Dehal, Paramvir, Christoffels, Alan, Rash, Sam, Hoon, Shawn, Smit, Arian, Maarten D. Sollewijn Gelpke, Roach, Jared, Oh, Tania, Ho, Isaac Y., Wong, Marie, Detter, Chris, Verhoef, Frans, Predki, Paul, Tay, Alice, Lucas, Susan, Richardson, Paul, Smith, Sarah F., Clark, Melody S., Yvonne J. K. Edwards, Doggett, Norman, Zharkikh, Andrey, Tavtigian, Sean V., Pruss, Dmitry, Barnstead, Mary, Evans, Cheryl, Baden, Holly, Powell, Justin, Glusman, Gustavo, Rowen, Lee, Hood, Leroy, Tan, Y. H., Elgar, Greg, Hawkins, Trevor, Venkatesh, Byrappa, Rokhsar, Daniel, Brenner, Sydney
Published in Science (American Association for the Advancement of Science) (23.08.2002)
Published in Science (American Association for the Advancement of Science) (23.08.2002)
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Journal Article
Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection
Ruan, Yijun, Wei, Chia Lin, Ling, Ai Ee, Vega, Vinsensius B, Thoreau, Herve, Se Thoe, Su Yun, Chia, Jer-Ming, Ng, Patrick, Chiu, Kuo Ping, Lim, Landri, Zhang, Tao, Chan, Kwai Peng, Lin Ean, Lynette Oon, Ng, Mah Lee, Leo, Sin Yee, Ng, Lisa FP, Ren, Ee Chee, Stanton, Lawrence W, Long, Philip M, Liu, Edison T
Published in The Lancet (British edition) (24.05.2003)
Published in The Lancet (British edition) (24.05.2003)
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Journal Article
KBase: The United States Department of Energy Systems Biology Knowledgebase
Arkin, Adam P, Cottingham, Robert W, Henry, Christopher S, Harris, Nomi L, Stevens, Rick L, Maslov, Sergei, Dehal, Paramvir, Ware, Doreen, Perez, Fernando, Canon, Shane, Sneddon, Michael W, Henderson, Matthew L, Riehl, William J, Murphy-Olson, Dan, Chan, Stephen Y, Kamimura, Roy T, Kumari, Sunita, Drake, Meghan M, Brettin, Thomas S, Glass, Elizabeth M, Chivian, Dylan, Gunter, Dan, Weston, David J, Allen, Benjamin H, Baumohl, Jason, Best, Aaron A, Bowen, Ben, Brenner, Steven E, Bun, Christopher C, Chandonia, John-Marc, Chia, Jer-Ming, Colasanti, Ric, Conrad, Neal, Davis, James J, Davison, Brian H, DeJongh, Matthew, Devoid, Scott, Dietrich, Emily, Dubchak, Inna, Edirisinghe, Janaka N, Fang, Gang, Faria, José P, Frybarger, Paul M, Gerlach, Wolfgang, Gerstein, Mark, Greiner, Annette, Gurtowski, James, Haun, Holly L, He, Fei, Jain, Rashmi, Joachimiak, Marcin P, Keegan, Kevin P, Kondo, Shinnosuke, Kumar, Vivek, Land, Miriam L, Meyer, Folker, Mills, Marissa, Novichkov, Pavel S, Oh, Taeyun, Olsen, Gary J, Olson, Robert, Parrello, Bruce, Pasternak, Shiran, Pearson, Erik, Poon, Sarah S, Price, Gavin A, Ramakrishnan, Srividya, Ranjan, Priya, Ronald, Pamela C, Schatz, Michael C, Seaver, Samuel M D, Shukla, Maulik, Sutormin, Roman A, Syed, Mustafa H, Thomason, James, Tintle, Nathan L, Wang, Daifeng, Xia, Fangfang, Yoo, Hyunseung, Yoo, Shinjae, Yu, Dantong
Published in Nature biotechnology (01.07.2018)
Published in Nature biotechnology (01.07.2018)
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Journal Article
The tomato genome sequence provides insights into fleshy fruit evolution
Tomato Genome Consortium, Sato, S, Guigó Serra, Roderic, Cámara, Francisco, Gianese, S
Published in Nature (London) (31.05.2012)
Published in Nature (London) (31.05.2012)
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Journal Article
population-based LD map of the human chromosome 6p
Yu, Hong Xiang, Chia, Jer-Ming, Bourque, Guillaume, Wong, Marie Vivien, Chan, Soh Ha, Ren, Ee Chee
Published in Immunogenetics (New York) (01.09.2005)
Published in Immunogenetics (New York) (01.09.2005)
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Journal Article
B73 Maize Genome: Complexity, Diversity, and Dynamics
Ware, Doreen, Fulton, Robert S, Wei, Fusheng, Pasternak, Shiran, Liang, Chengzhi, Zhang, Jianwei, Fulton, Lucinda, Graves, Tina A, Minx, Patrick, Courtney, Laura, Kruchowski, Scott S, Strong, Cindy, Delehaunty, Kim, Rock, Susan M, Belter, Eddie, Du, Feiyu, Abbott, Rachel M, Marchetto, Pamela, Ochoa, Kerri, Jackson, Stephanie M, Chen, Weizu, Yan, Le, Cardenas, Marco, Waligorski, Jason, Applebaum, Elizabeth, Falcone, Jason, Kanchi, Krishna, Scimone, Adam, Henke, Jessica, Rotter, Kelsi, Hodges, Jennifer, Ingenthron, Elizabeth, Mead, Kelly, Chinwalla, Asif, Leonard, Shawn, Crouse, Kevin, Collura, Kristi, Kudrna, Dave, He, Ruifeng, Angelova, Angelina, Rajasekar, Shanmugam, Mueller, Teri, Lomeli, Rene, Ko, Ara, Delaney, Krista, Lopez, Georgina, Campos, David, Ashley, Elizabeth, Lee, Seunghee, Dujmic, Zeljko, Kim, Woojin, Zuccolo, Andrea, Sebastian, Aswathy, Spiegel, Lori, Nascimento, Lidia, Ambroise, Claude, Spooner, Will, Narechania, Apurva, Ren, Liya, Wei, Sharon, Kumari, Sunita, Faga, Ben, Van Buren, Peter, Yeh, Cheng-Ting, Emrich, Scott J, Jia, Yi, Barbazuk, W. Brad, Baucom, Regina S, Brutnell, Thomas P, Carpita, Nicholas C, Chaparro, Cristian, Chia, Jer-Ming, Estill, James C, Fu, Yan, Jeddeloh, Jeffrey A, Han, Yujun, Lisch, Damon R, McCann, Maureen C, Myers, Alan M, Nguyen, John, Ponnala, Lalit, Schneider, Kevin L, Sharma, Anupma, Sun, Qi, Wang, Hao, Westerman, Richard, Wolfgruber, Thomas K, Yang, Lixing, Yu, Yeisoo, Zhang, Lifang, Zhou, Shiguo, Zhu, Qihui, Bennetzen, Jeffrey L, Dawe, R. Kelly, Jiang, Jiming, Jiang, Ning, Presting, Gernot G, Clifton, Sandra W, McCombie, W. Richard, Wing, Rod A
Published in Science (American Association for the Advancement of Science) (20.11.2009)
Published in Science (American Association for the Advancement of Science) (20.11.2009)
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Journal Article
Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes
Christoffels, Alan, Koh, Esther G L, Chia, Jer-Ming, Brenner, Sydney, Aparicio, Samuel, Venkatesh, Byrappa
Published in Molecular biology and evolution (01.06.2004)
Published in Molecular biology and evolution (01.06.2004)
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Journal Article
KBase: The United States Department of Energy Systems Biology Knowledgebase
Arkin, Adam P., Cottingham, Robert W., Henry, Christopher S., Harris, Nomi L., Stevens, Rick L., Maslov, Sergei, Dehal, Paramvir, Ware, Doreen, Perez, Fernando, Canon, Shane, Sneddon, Michael W., Henderson, Matthew L., Riehl, William J., Murphy-Olson, Dan, Chan, Stephen Y., Kamimura, Roy T., Kumari, Sunita, Drake, Meghan M., Brettin, Thomas S., Glass, Elizabeth M., Chivian, Dylan, Gunter, Dan, Weston, David J., Allen, Benjamin H., Baumohl, Jason, Best, Aaron A., Bowen, Ben, Brenner, Steven E., Bun, Christopher C., Chandonia, John-Marc, Chia, Jer-Ming, Colasanti, Ric, Conrad, Neal, Davis, James J., Davison, Brian H., DeJongh, Matthew, Devoid, Scott, Dietrich, Emily, Dubchak, Inna, Edirisinghe, Janaka N., Fang, Gang, Faria, José P., Frybarger, Paul M., Gerlach, Wolfgang, Gerstein, Mark, Greiner, Annette, Gurtowski, James, Haun, Holly L., He, Fei, Jain, Rashmi, Joachimiak, Marcin P., Keegan, Kevin P., Kondo, Shinnosuke, Kumar, Vivek, Land, Miriam L., Meyer, Folker, Mills, Marissa, Novichkov, Pavel S., Oh, Taeyun, Olsen, Gary J., Olson, Robert, Parrello, Bruce, Pasternak, Shiran, Pearson, Erik, Poon, Sarah S., Price, Gavin A., Ramakrishnan, Srividya, Ranjan, Priya, Ronald, Pamela C., Schatz, Michael C., Seaver, Samuel M. D., Shukla, Maulik, Sutormin, Roman A., Syed, Mustafa H., Thomason, James, Tintle, Nathan L., Wang, Daifeng, Xia, Fangfang, Yoo, Hyunseung, Yoo, Shinjae, Yu, Dantong
Published in Nature biotechnology (06.07.2018)
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Published in Nature biotechnology (06.07.2018)
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