Deep learning-based transformation of H&E stained tissues into special stains
de Haan, Kevin, Zhang, Yijie, Zuckerman, Jonathan E., Liu, Tairan, Sisk, Anthony E., Diaz, Miguel F. P., Jen, Kuang-Yu, Nobori, Alexander, Liou, Sofia, Zhang, Sarah, Riahi, Rana, Rivenson, Yair, Wallace, W. Dean, Ozcan, Aydogan
Published in Nature communications (12.08.2021)
Published in Nature communications (12.08.2021)
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Journal Article
Computational Segmentation and Classification of Diabetic Glomerulosclerosis
Ginley, Brandon, Lutnick, Brendon, Jen, Kuang-Yu, Fogo, Agnes B, Jain, Sanjay, Rosenberg, Avi, Walavalkar, Vighnesh, Wilding, Gregory, Tomaszewski, John E, Yacoub, Rabi, Rossi, Giovanni Maria, Sarder, Pinaki
Published in Journal of the American Society of Nephrology (01.10.2019)
Published in Journal of the American Society of Nephrology (01.10.2019)
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Journal Article
Mutational signatures in tumours induced by high and low energy radiation in Trp53 deficient mice
Rose Li, Yun, Halliwill, Kyle D, Adams, Cassandra J, Iyer, Vivek, Riva, Laura, Mamunur, Rashid, Jen, Kuang-Yu, Del Rosario, Reyno, Fredlund, Erik, Hirst, Gillian, Alexandrov, Ludmil B, Adams, David, Balmain, Allan
Published in Nature communications (20.01.2020)
Published in Nature communications (20.01.2020)
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Journal Article
Computational pathology model to assess acute and chronic transformations of the tubulointerstitial compartment in renal allograft biopsies
Augulis, Renaldas, Rasmusson, Allan, Laurinaviciene, Aida, Jen, Kuang-Yu, Laurinavicius, Arvydas
Published in Scientific reports (04.03.2024)
Published in Scientific reports (04.03.2024)
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Journal Article
MET Exon 14 Mutation Encodes an Actionable Therapeutic Target in Lung Adenocarcinoma
Lu, Xinyuan, Peled, Nir, Greer, John, Wu, Wei, Choi, Peter, Berger, Alice H, Wong, Sergio, Jen, Kuang-Yu, Seo, Youngho, Hann, Byron, Brooks, Angela, Meyerson, Matthew, Collisson, Eric A
Published in Cancer research (Chicago, Ill.) (15.08.2017)
Published in Cancer research (Chicago, Ill.) (15.08.2017)
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Journal Article
The mutational landscapes of genetic and chemical models of Kras-driven lung cancer
Westcott, Peter M K, Halliwill, Kyle D, To, Minh D, Rashid, Mamunur, Rust, Alistair G, Keane, Thomas M, Delrosario, Reyno, Jen, Kuang-Yu, Gurley, Kay E, Kemp, Christopher J, Fredlund, Erik, Quigley, David A, Adams, David J, Balmain, Allan
Published in Nature (London) (22.01.2015)
Published in Nature (London) (22.01.2015)
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Journal Article
Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma
Shamir, Eliah R, Devine, W Patrick, Pekmezci, Melike, Umetsu, Sarah E, Krings, Gregor, Federman, Scot, Cho, Soo-Jin, Saunders, Tara A, Jen, Kuang-Yu, Bergsland, Emily, Jones, Kirk, Kim, Grace E, Kakar, Sanjay, Chiu, Charles Y, Joseph, Nancy M
Published in Modern pathology (01.02.2019)
Published in Modern pathology (01.02.2019)
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Journal Article
Automated Computational Detection of Interstitial Fibrosis, Tubular Atrophy, and Glomerulosclerosis
Ginley, Brandon, Jen, Kuang-Yu, Han, Seung Seok, Rodrigues, Luís, Jain, Sanjay, Fogo, Agnes B, Zuckerman, Jonathan, Walavalkar, Vighnesh, Miecznikowski, Jeffrey C, Wen, Yumeng, Yen, Felicia, Yun, Donghwan, Moon, Kyung Chul, Rosenberg, Avi, Parikh, Chirag, Sarder, Pinaki
Published in Journal of the American Society of Nephrology (01.04.2021)
Published in Journal of the American Society of Nephrology (01.04.2021)
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Journal Article
An integrated iterative annotation technique for easing neural network training in medical image analysis
Lutnick, Brendon, Ginley, Brandon, Govind, Darshana, McGarry, Sean D, LaViolette, Peter S, Yacoub, Rabi, Jain, Sanjay, Tomaszewski, John E, Jen, Kuang-Yu, Sarder, Pinaki
Published in Nature machine intelligence (01.02.2019)
Published in Nature machine intelligence (01.02.2019)
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Journal Article
CUL4A Induces Epithelial-Mesenchymal Transition and Promotes Cancer Metastasis by Regulating ZEB1 Expression
YUNSHAN WAN, MINGXIN WEN, LABARGE, Mark A, LIANG YOU, KOGAN, Scott C, GRAY, Joe W, MAO, Jian-Hua, GUANGWEI WEI, YONGWON KWON, YANGYANG XU, YUEYONG LIU, PENGJU ZHANG, XIUQUAN HE, QIN WANG, YURONG HUANG, JEN, Kuang-Yu
Published in Cancer research (Chicago, Ill.) (15.01.2014)
Published in Cancer research (Chicago, Ill.) (15.01.2014)
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Journal Article
Improving the accuracy of gastrointestinal neuroendocrine tumor grading with deep learning
Govind, Darshana, Jen, Kuang-Yu, Matsukuma, Karen, Gao, Guofeng, Olson, Kristin A, Gui, Dorina, Wilding, Gregory E, Border, Samuel P, Sarder, Pinaki
Published in Scientific reports (06.07.2020)
Published in Scientific reports (06.07.2020)
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Journal Article
Tonsillar Kaposi sarcoma in a renal transplant patient
Howard, John H., Darrow, Morgan, Chen, Ling‐Xin, Alnimri, Muna, Jen, Kuang‐Yu
Published in Transplant infectious disease (01.10.2020)
Published in Transplant infectious disease (01.10.2020)
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Journal Article
PodoSighter: A Cloud-Based Tool for Label-Free Podocyte Detection in Kidney Whole-Slide Images
Govind, Darshana, Becker, Jan U, Miecznikowski, Jeffrey, Rosenberg, Avi Z, Dang, Julien, Tharaux, Pierre Louis, Yacoub, Rabi, Thaiss, Friedrich, Hoyer, Peter F, Manthey, David, Lutnick, Brendon, Worral, Amber M, Mohammad, Imtiaz, Walavalkar, Vighnesh, Tomaszewski, John E, Jen, Kuang-Yu, Sarder, Pinaki
Published in Journal of the American Society of Nephrology (01.11.2021)
Published in Journal of the American Society of Nephrology (01.11.2021)
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Journal Article
Diverse tumour susceptibility in Collaborative Cross mice: identification of a new mouse model for human gastric tumourigenesis
Wang, Pin, Wang, Yunshan, Langley, Sasha A, Zhou, Yan-Xia, Jen, Kuang-Yu, Sun, Qi, Brislawn, Colin, Rojas, Carolina M, Wahl, Kimberly L, Wang, Ting, Fan, Xiangshan, Jansson, Janet K, Celniker, Susan E, Zou, Xiaoping, Threadgill, David W, Snijders, Antoine M, Mao, Jian-Hua
Published in Gut (01.11.2019)
Published in Gut (01.11.2019)
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Journal Article
Hepatic steatosis after pediatric liver transplant
Perito, Emily R., Vase, Tabitha, Ramachandran, Rageshree, Phelps, Andrew, Jen, Kuang‐Yu, Lustig, Robert H., Feldstein, Vickie A., Rosenthal, Philip
Published in Liver transplantation (01.07.2017)
Published in Liver transplantation (01.07.2017)
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Journal Article
Membranoproliferative Glomerulonephritis Associated with Nivolumab Therapy
Young, Brian, Jen, Kuang-Yu, Giehl, Nolan, Cruz-Whitley, Jessica
Published in Case Reports in Nephrology (2020)
Published in Case Reports in Nephrology (2020)
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Journal Article
No difference in 4‐nitroquinoline induced tumorigenesis between germ‐free and colonized mice
Zhou, Yan‐Xia, Fuentes‐Creollo, Gabriela, Ponce, Frank, Langley, Sasha A., Jen, Kuang‐Yu, Celniker, Susan E., Mao, Jian‐Hua, Snijders, Antoine M.
Published in Molecular carcinogenesis (01.05.2019)
Published in Molecular carcinogenesis (01.05.2019)
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