Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing
Leung, Szi Kay, Jeffries, Aaron R., Castanho, Isabel, Jordan, Ben T., Moore, Karen, Davies, Jonathan P., Dempster, Emma L., Bray, Nicholas J., O’Neill, Paul, Tseng, Elizabeth, Ahmed, Zeshan, Collier, David A., Jeffery, Erin D., Prabhakar, Shyam, Schalkwyk, Leonard, Jops, Connor, Gandal, Michael J., Sheynkman, Gloria M., Hannon, Eilis, Mill, Jonathan
Published in Cell reports (Cambridge) (16.11.2021)
Published in Cell reports (Cambridge) (16.11.2021)
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Journal Article
Optimised protocol for monitoring SARS-CoV-2 in wastewater using reverse complement PCR-based whole-genome sequencing
Child, Harry T, O'Neill, Paul A, Moore, Karen, Rowe, William, Denise, Hubert, Bass, David, Wade, Matthew J, Loose, Matt, Paterson, Steve, van Aerle, Ronny, Jeffries, Aaron R
Published in PloS one (14.04.2023)
Published in PloS one (14.04.2023)
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Journal Article
Allelic Skewing of DNA Methylation Is Widespread across the Genome
Schalkwyk, Leonard C., Meaburn, Emma L., Smith, Rebecca, Dempster, Emma L., Jeffries, Aaron R., Davies, Matthew N., Plomin, Robert, Mill, Jonathan
Published in American journal of human genetics (12.02.2010)
Published in American journal of human genetics (12.02.2010)
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Journal Article
Long-read transcript sequencing identifies differential isoform expression in the entorhinal cortex in a transgenic model of tau pathology
Leung, Szi Kay, Bamford, Rosemary A., Jeffries, Aaron R., Castanho, Isabel, Chioza, Barry, Flaxman, Christine S., Moore, Karen, Dempster, Emma L., Harvey, Joshua, Brown, Jonathan T., Ahmed, Zeshan, O’Neill, Paul, Richardson, Sarah J., Hannon, Eilis, Mill, Jonathan
Published in Nature communications (02.08.2024)
Published in Nature communications (02.08.2024)
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Journal Article
Comparison of metagenomic and targeted methods for sequencing human pathogenic viruses from wastewater
Child, Harry T, Airey, George, Maloney, Daniel M, Parker, Abby, Wild, Jonathan, McGinley, Suzie, Evens, Nicholas, Porter, Jonathan, Templeton, Kate, Paterson, Steve, van Aerle, Ronny, Wade, Matthew J, Jeffries, Aaron R, Bassano, Irene
Published in mBio (25.10.2023)
Published in mBio (25.10.2023)
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Journal Article
Developmentally dynamic changes in DNA methylation in the human pancreas
MacCalman, Ailsa, De Franco, Elisa, Franklin, Alice, Flaxman, Christine S, Richardson, Sarah J, Murrall, Kathryn, Burrage, Joe, Walker, Emma M, Morgan, Noel G, Hattersley, Andrew T, Dempster, Emma L, Hannon, Eilis, Jeffries, Aaron R, Owens, Nick D. L, Mill, Jonathan
Published in BMC genomics (03.06.2024)
Published in BMC genomics (03.06.2024)
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Journal Article
Deciphering novel TCF4-driven mechanisms underlying a common triplet repeat expansion-mediated disease
Bhattacharyya, Nihar, Chai, Niuzheng, Hafford-Tear, Nathaniel J, Sadan, Amanda N, Szabo, Anita, Zarouchlioti, Christina, Jedlickova, Jana, Leung, Szi Kay, Liao, Tianyi, Dudakova, Lubica, Skalicka, Pavlina, Parekh, Mohit, Moghul, Ismail, Jeffries, Aaron R, Cheetham, Michael E, Muthusamy, Kirithika, Hardcastle, Alison J, Pontikos, Nikolas, Liskova, Petra, Tuft, Stephen J, Davidson, Alice E
Published in PLoS genetics (07.05.2024)
Published in PLoS genetics (07.05.2024)
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In field use of water samples for genomic surveillance of infectious spleen and kidney necrosis virus (ISKNV) infecting tilapia fish in Lake Volta, Ghana
Alathari, Shayma, Joseph, Andrew, Bolaños, Luis M., Studholme, David J., Jeffries, Aaron R., Appenteng, Patrick, Duodu, Kwaku A., Sawyerr, Eric B., Paley, Richard, Tyler, Charles R., Temperton, Ben
Published in PeerJ (San Francisco, CA) (12.07.2024)
Published in PeerJ (San Francisco, CA) (12.07.2024)
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Journal Article
Stochastic Choice of Allelic Expression in Human Neural Stem Cells
Jeffries, Aaron R., Perfect, Leo W., Ledderose, Julia, Schalkwyk, Leonard C., Bray, Nicholas J., Mill, Jonathan, Price, Jack
Published in Stem cells (Dayton, Ohio) (01.09.2012)
Published in Stem cells (Dayton, Ohio) (01.09.2012)
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Journal Article
Attenuated Induction of the Unfolded Protein Response in Adult Human Primary Astrocytes in Response to Recurrent Low Glucose
Weightman Potter, Paul G, Washer, Sam J, Jeffries, Aaron R, Holley, Janet E, Gutowski, Nick J, Dempster, Emma L, Beall, Craig
Published in Frontiers in endocrinology (Lausanne) (26.05.2021)
Published in Frontiers in endocrinology (Lausanne) (26.05.2021)
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Novel epigenetic clock for fetal brain development predicts prenatal age for cellular stem cell models and derived neurons
Steg, Leonard C, Shireby, Gemma L, Imm, Jennifer, Davies, Jonathan P, Franklin, Alice, Flynn, Robert, Namboori, Seema C, Bhinge, Akshay, Jeffries, Aaron R, Burrage, Joe, Neilson, Grant W A, Walker, Emma M, Perfect, Leo W, Price, Jack, McAlonan, Grainne, Srivastava, Deepak P, Bray, Nicholas J, Cope, Emma L, Jones, Kimberley M, Allen, Nicholas D, Pishva, Ehsan, Dempster, Emma L, Lunnon, Katie, Mill, Jonathan, Hannon, Eilis
Published in Molecular brain (26.06.2021)
Published in Molecular brain (26.06.2021)
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Journal Article
A comparison of mitochondrial DNA isolation methods in frozen post-mortem human brain tissue-applications for studies of mitochondrial genetics in brain disorders
Devall, Matthew, Burrage, Joe, Caswell, Richard, Johnson, Matthew, Troakes, Claire, Al-Sarraj, Safa, Jeffries, Aaron R, Mill, Jonathan, Lunnon, Katie
Published in BioTechniques (01.10.2015)
Published in BioTechniques (01.10.2015)
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Journal Article
Whole transcriptome in silico screening implicates cardiovascular and infectious disease in the mechanism of action underlying atypical antipsychotic side effects
Malekizadeh, Yasaman, Williams, Gareth, Kelson, Mark, Whitfield, David, Mill, Jonathan, Collier, David A., Ballard, Clive, Jeffries, Aaron R., Creese, Byron
Published in Alzheimer's & dementia : translational research & clinical interventions (2020)
Published in Alzheimer's & dementia : translational research & clinical interventions (2020)
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Journal Article
No Effect of Genome-Wide Significant Schizophrenia Risk Variation at the DRD2 Locus on the Allelic Expression of DRD2 in Postmortem Striatum
Toste, Carolina C., Duarte, Rodrigo R.R., Jeffries, Aaron R., Selvackadunco, Sashika, Troakes, Claire, O’Donovan, Michael C., Hill, Matthew J., Bray, Nicholas J.
Published in Complex psychiatry (01.10.2019)
Published in Complex psychiatry (01.10.2019)
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Journal Article
Molecular and phenotypic characterization of ring chromosome 22
Jeffries, Aaron R, Curran, Sarah, Elmslie, Frances, Sharma, Ajay, Wenger, Sharon, Hummel, Marybeth, Powell, John
Published in American journal of medical genetics. Part A (30.08.2005)
Published in American journal of medical genetics. Part A (30.08.2005)
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Journal Article
Evaluation of nanopore sequencing for epigenetic epidemiology: a comparison with DNA methylation microarrays
Flynn, Robert, Washer, Sam, Jeffries, Aaron R, Andrayas, Alexandria, Shireby, Gemma, Kumari, Meena, Schalkwyk, Leonard C, Mill, Jonathan, Hannon, Eilis
Published in Human molecular genetics (10.09.2022)
Published in Human molecular genetics (10.09.2022)
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Journal Article
Long-lasting transcription in hippocampal area CA1 after contextual fear conditioning
Mizuno, Keiko, Jeffries, Aaron R., Abel, Ted, Giese, K. Peter
Published in Neurobiology of learning and memory (01.07.2020)
Published in Neurobiology of learning and memory (01.07.2020)
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Journal Article
The role of omega-3 fatty acids in preventing glucocorticoid-induced reduction in human hippocampal neurogenesis and increase in apoptosis
Borsini, Alessandra, Stangl, Doris, Jeffries, Aaron R, Pariante, Carmine M, Thuret, Sandrine
Published in Translational psychiatry (07.07.2020)
Published in Translational psychiatry (07.07.2020)
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