Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
Du, Pan, Zhang, Xiao, Huang, Chiang-Ching, Jafari, Nadereh, Kibbe, Warren A, Hou, Lifang, Lin, Simon M
Published in BMC bioinformatics (30.11.2010)
Published in BMC bioinformatics (30.11.2010)
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Recurrent DGCR8, DROSHA, and SIX Homeodomain Mutations in Favorable Histology Wilms Tumors
Walz, Amy L., Ooms, Ariadne, Gadd, Samantha, Gerhard, Daniela S., Smith, Malcolm A., Guidry Auvil, Jaime M., Meerzaman, Daoud, Chen, Qing-Rong, Hsu, Chih Hao, Yan, Chunhua, Nguyen, Cu, Hu, Ying, Bowlby, Reanne, Brooks, Denise, Ma, Yussanne, Mungall, Andrew J., Moore, Richard A., Schein, Jacqueline, Marra, Marco A., Huff, Vicki, Dome, Jeffrey S., Chi, Yueh-Yun, Mullighan, Charles G., Ma, Jing, Wheeler, David A., Hampton, Oliver A., Jafari, Nadereh, Ross, Nicole, Gastier-Foster, Julie M., Perlman, Elizabeth J.
Published in Cancer cell (09.02.2015)
Published in Cancer cell (09.02.2015)
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Genome-wide DNA methylation analysis predicts an epigenetic switch for GATA factor expression in endometriosis
Dyson, Matthew T, Roqueiro, Damian, Monsivais, Diana, Ercan, C Mutlu, Pavone, Mary Ellen, Brooks, David C, Kakinuma, Toshiyuki, Ono, Masanori, Jafari, Nadereh, Dai, Yang, Bulun, Serdar E
Published in PLoS genetics (01.03.2014)
Published in PLoS genetics (01.03.2014)
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Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence
Koo, Jovanka T, Alleyne, Trevis M, Schiano, Chelsea A, Jafari, Nadereh, Lathem, Wyndham W
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2011)
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Blood Epigenetic Age may Predict Cancer Incidence and Mortality
Zheng, Yinan, Joyce, Brian T., Colicino, Elena, Liu, Lei, Zhang, Wei, Dai, Qi, Shrubsole, Martha J., Kibbe, Warren A., Gao, Tao, Zhang, Zhou, Jafari, Nadereh, Vokonas, Pantel, Schwartz, Joel, Baccarelli, Andrea A., Hou, Lifang
Published in EBioMedicine (01.03.2016)
Published in EBioMedicine (01.03.2016)
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Functional specialization of the small interfering RNA pathway in response to virus infection
Marques, Joao Trindade, Wang, Ji-Ping, Wang, Xiaohong, de Oliveira, Karla Pollyanna Vieira, Gao, Catherine, Aguiar, Eric Roberto Guimaraes Rocha, Jafari, Nadereh, Carthew, Richard W
Published in PLoS pathogens (01.08.2013)
Published in PLoS pathogens (01.08.2013)
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DNA methylation alterations in response to pesticide exposure in vitro
Zhang, Xiao, Wallace, Andrew D., Du, Pan, Kibbe, Warren A., Jafari, Nadereh, Xie, Hehuang, Lin, Simon, Baccarelli, Andrea, Soares, Marcelo Bento, Hou, Lifang
Published in Environmental and molecular mutagenesis (01.08.2012)
Published in Environmental and molecular mutagenesis (01.08.2012)
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Central role of ULK1 in type I interferon signaling
Saleiro, Diana, Mehrotra, Swarna, Kroczynska, Barbara, Beauchamp, Elspeth M, Lisowski, Pawel, Majchrzak-Kita, Beata, Bhagat, Tushar D, Stein, Brady L, McMahon, Brandon, Altman, Jessica K, Kosciuczuk, Ewa M, Baker, Darren P, Jie, Chunfa, Jafari, Nadereh, Thompson, Craig B, Levine, Ross L, Fish, Eleanor N, Verma, Amit K, Platanias, Leonidas C
Published in Cell reports (Cambridge) (28.04.2015)
Published in Cell reports (Cambridge) (28.04.2015)
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A longitudinal study of DNA methylation as a potential mediator of age-related diabetes risk
Grant, Crystal D., Jafari, Nadereh, Hou, Lifang, Li, Yun, Stewart, James D., Zhang, Guosheng, Lamichhane, Archana, Manson, JoAnn E., Baccarelli, Andrea A., Whitsel, Eric A., Conneely, Karen N.
Published in GeroScience (01.12.2017)
Published in GeroScience (01.12.2017)
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Genomics of Human Intracranial Aneurysm Wall
SHI, Changbin, AWAD, Issam A, BENDOK, Bernard R, JAFARI, Nadereh, LIN, Simon, PAN DU, HAGE, Ziad A, SHENKAR, Robert, GETCH, Christopher C, BREDEL, Markus, HUNT BATJER, H
Published in Stroke (1970) (01.04.2009)
Published in Stroke (1970) (01.04.2009)
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Transcription coactivator mediator subunit MED1 Is required for the development of fatty liver in the mouse
Bai, Liang, Jia, Yuzhi, Viswakarma, Navin, Huang, Jiansheng, Vluggens, Aurore, Wolins, Nathan E., Jafari, Nadereh, Rao, M. Sambasiva, Borensztajn, Jayme, Yang, Gongshe, Reddy, Janardan K.
Published in Hepatology (Baltimore, Md.) (01.04.2011)
Published in Hepatology (Baltimore, Md.) (01.04.2011)
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Technical reproducibility of genotyping SNP arrays used in genome-wide association studies
Hong, Huixiao, Xu, Lei, Liu, Jie, Jones, Wendell D, Su, Zhenqiang, Ning, Baitang, Perkins, Roger, Ge, Weigong, Miclaus, Kelci, Zhang, Li, Park, Kyunghee, Green, Bridgett, Han, Tao, Fang, Hong, Lambert, Christophe G, Vega, Silvia C, Lin, Simon M, Jafari, Nadereh, Czika, Wendy, Wolfinger, Russell D, Goodsaid, Federico, Tong, Weida, Shi, Leming
Published in PloS one (07.09.2012)
Published in PloS one (07.09.2012)
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Metastable DNA methylation sites associated with longitudinal lung function decline and aging in humans: an epigenome-wide study in the NAS and KORA cohorts
Carmona, Juan Jose, Barfield, Richard T., Panni, Tommaso, Nwanaji-Enwerem, Jamaji C., Just, Allan C., Hutchinson, John N., Colicino, Elena, Karrasch, Stefan, Wahl, Simone, Kunze, Sonja, Jafari, Nadereh, Zheng, Yinan, Hou, Lifang, DeMeo, Dawn L., Litonjua, Augusto A., Vokonas, Pantel S., Peters, Annette, Lin, Xihong, Schwartz, Joel, Schulz, Holger, Baccarelli, Andrea A.
Published in Epigenetics (02.11.2018)
Published in Epigenetics (02.11.2018)
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The effect of vorinostat on the development of resistance to doxorubicin in neuroblastoma
Lautz, Timothy B, Jie, Chunfa, Clark, Sandra, Naiditch, Jessica A, Jafari, Nadereh, Qiu, Yi-Yong, Zheng, Xin, Chu, Fei, Madonna, Mary Beth
Published in PloS one (19.07.2012)
Published in PloS one (19.07.2012)
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Overexpression of RhoA Induces Preneoplastic Transformation of Primary Mammary Epithelial Cells
XIANGSHAN ZHAO, LIN LU, POKHRIYAL, Nidhi, HUI MA, LEI DUAN, SIMON LIN, JAFARI, Nadereh, BAND, Hamid, BAND, Vimla
Published in Cancer research (Chicago, Ill.) (15.01.2009)
Published in Cancer research (Chicago, Ill.) (15.01.2009)
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The role of inflammatory pathway genetic variation on maternal metabolic phenotypes during pregnancy
Urbanek, Margrit, Hayes, M Geoffrey, Lee, Hoon, Freathy, Rachel M, Lowe, Lynn P, Ackerman, Christine, Jafari, Nadereh, Dyer, Alan R, Cox, Nancy J, Dunger, David B, Hattersley, Andrew T, Metzger, Boyd E, Lowe, Jr, William L
Published in PloS one (30.03.2012)
Published in PloS one (30.03.2012)
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Correction: Functional Specialization of the Small Interfering RNA Pathway in Response to Virus Infection
Marques, Joao Trindade, Wang, Ji-Ping, Wang, Xiaohong, de Oliveira, Karla Pollyanna Vieira, Gao, Catherine, Aguiar, Eric Roberto Guimaraes Rocha, Jafari, Nadereh, Carthew, Richard W.
Published in PLoS pathogens (22.10.2013)
Published in PLoS pathogens (22.10.2013)
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Activated TLR signaling in atherosclerosis among women with lower Framingham risk score: the multi-ethnic study of atherosclerosis
Huang, Chiang-Ching, Liu, Kiang, Pope, Richard M, Du, Pan, Lin, Simon, Rajamannan, Nalini M, Huang, Qi-Quan, Jafari, Nadereh, Burke, Gregory L, Post, Wendy, Watson, Karol E, Johnson, Craig, Daviglus, Martha L, Lloyd-Jones, Donald M
Published in PloS one (16.06.2011)
Published in PloS one (16.06.2011)
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