Widespread natural variation of DNA methylation within angiosperms
Niederhuth, Chad E, Bewick, Adam J, Ji, Lexiang, Alabady, Magdy S, Kim, Kyung Do, Li, Qing, Rohr, Nicholas A, Rambani, Aditi, Burke, John M, Udall, Joshua A, Egesi, Chiedozie, Schmutz, Jeremy, Grimwood, Jane, Jackson, Scott A, Springer, Nathan M, Schmitz, Robert J
Published in Genome Biology (27.09.2016)
Published in Genome Biology (27.09.2016)
Get full text
Journal Article
Improving End-User Trust in the Quality of Commercial Probiotic Products
Jackson, Scott A, Schoeni, Jean L, Vegge, Christina, Pane, Marco, Stahl, Buffy, Bradley, Michael, Goldman, Virginia S, Burguière, Pierre, Atwater, John B, Sanders, Mary Ellen
Published in Frontiers in microbiology (17.04.2019)
Published in Frontiers in microbiology (17.04.2019)
Get full text
Journal Article
Gene Networks in Plant Biology: Approaches in Reconstruction and Analysis
Li, Yupeng, Pearl, Stephanie A., Jackson, Scott A.
Published in Trends in plant science (01.10.2015)
Published in Trends in plant science (01.10.2015)
Get full text
Journal Article
fate of duplicated genes in a polyploid plant genome
Roulin, Anne, Auer, Paul L, Libault, Marc, Schlueter, Jessica, Farmer, Andrew, May, Greg, Stacey, Gary, Doerge, Rebecca W, Jackson, Scott A
Published in The Plant journal : for cell and molecular biology (01.01.2013)
Published in The Plant journal : for cell and molecular biology (01.01.2013)
Get full text
Journal Article
Widespread and frequent horizontal transfers of transposable elements in plants
El Baidouri, Moaine, Carpentier, Marie-Christine, Cooke, Richard, Gao, Dongying, Lasserre, Eric, Llauro, Christel, Mirouze, Marie, Picault, Nathalie, Jackson, Scott A, Panaud, Olivier
Published in Genome research (01.05.2014)
Published in Genome research (01.05.2014)
Get full text
Journal Article
Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
Song, Qijian, Jenkins, Jerry, Jia, Gaofeng, Hyten, David L, Pantalone, Vince, Jackson, Scott A, Schmutz, Jeremy, Cregan, Perry B
Published in BMC genomics (06.01.2016)
Published in BMC genomics (06.01.2016)
Get full text
Journal Article
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
Zhai, Jixian, Jeong, Dong-Hoon, De Paoli, Emanuele, Park, Sunhee, Rosen, Benjamin D, Li, Yupeng, González, Alvaro J, Yan, Zhe, Kitto, Sherry L, Grusak, Michael A, Jackson, Scott A, Stacey, Gary, Cook, Douglas R, Green, Pamela J, Sherrier, D Janine, Meyers, Blake C
Published in Genes & development (01.12.2011)
Published in Genes & development (01.12.2011)
Get full text
Journal Article
Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes
Gao, Dongying, Li, Yupeng, Kim, Kyung Do, Abernathy, Brian, Jackson, Scott A
Published in Genome Biology (18.01.2016)
Published in Genome Biology (18.01.2016)
Get full text
Journal Article
Genome-Wide Reinforcement of DNA Methylation Occurs during Somatic Embryogenesis in Soybean
Ji, Lexiang, Mathioni, Sandra M, Johnson, Sarah, Tucker, Donna, Bewick, Adam J, Do Kim, Kyung, Daron, Josquin, Slotkin, R Keith, Jackson, Scott A, Parrott, Wayne A, Meyers, Blake C, Schmitz, Robert J
Published in The Plant cell (01.10.2019)
Published in The Plant cell (01.10.2019)
Get full text
Journal Article
Comprehensive definition of genome features in Spirodela polyrhiza by high‐depth physical mapping and short‐read DNA sequencing strategies
Michael, Todd P., Bryant, Douglas, Gutierrez, Ryan, Borisjuk, Nikolai, Chu, Philomena, Zhang, Hanzhong, Xia, Jing, Zhou, Junfei, Peng, Hai, El Baidouri, Moaine, Hallers, Boudewijn, Hastie, Alex R., Liang, Tiffany, Acosta, Kenneth, Gilbert, Sarah, McEntee, Connor, Jackson, Scott A., Mockler, Todd C., Zhang, Weixiong, Lam, Eric
Published in The Plant journal : for cell and molecular biology (01.02.2017)
Published in The Plant journal : for cell and molecular biology (01.02.2017)
Get full text
Journal Article
Divergent cytosine DNA methylation patterns in single-cell, soybean root hairs
Hossain, Md Shakhawat, Kawakatsu, Taiji, Kim, Kyung Do, Zhang, Ning, Nguyen, Cuong T., Khan, Saad M., Batek, Josef M., Joshi, Trupti, Schmutz, Jeremy, Grimwood, Jane, Schmitz, Robert J., Xu, Dong, Jackson, Scott A., Ecker, Joseph R., Stacey, Gary
Published in The New phytologist (01.04.2017)
Published in The New phytologist (01.04.2017)
Get full text
Journal Article
Pod and Seed Trait QTL Identification To Assist Breeding for Peanut Market Preferences
Chavarro, Carolina, Chu, Ye, Holbrook, Corley, Isleib, Thomas, Bertioli, David, Hovav, Ran, Butts, Christopher, Lamb, Marshall, Sorensen, Ronald, A Jackson, Scott, Ozias-Akins, Peggy
Published in G3 : genes - genomes - genetics (01.07.2020)
Published in G3 : genes - genomes - genetics (01.07.2020)
Get full text
Journal Article
Sequencing crop genomes: approaches and applications
Jackson, Scott A., Iwata, Aiko, Lee, Suk-Ha, Schmutz, Jeremy, Shoemaker, Randy
Published in The New phytologist (01.09.2011)
Published in The New phytologist (01.09.2011)
Get full text
Journal Article
Selection and adaptive introgression guided the complex evolutionary history of the European common bean
Bellucci, Elisa, Benazzo, Andrea, Xu, Chunming, Bitocchi, Elena, Rodriguez, Monica, Alseekh, Saleh, Di Vittori, Valerio, Gioia, Tania, Neumann, Kerstin, Cortinovis, Gaia, Frascarelli, Giulia, Murube, Ester, Trucchi, Emiliano, Nanni, Laura, Ariani, Andrea, Logozzo, Giuseppina, Shin, Jin Hee, Liu, Chaochih, Jiang, Liang, Ferreira, Juan José, Campa, Ana, Attene, Giovanna, Morrell, Peter L., Bertorelle, Giorgio, Graner, Andreas, Gepts, Paul, Fernie, Alisdair R., Jackson, Scott A., Papa, Roberto
Published in Nature communications (05.04.2023)
Published in Nature communications (05.04.2023)
Get full text
Journal Article
Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut
Clevenger, Josh, Chu, Ye, Chavarro, Carolina, Agarwal, Gaurav, Bertioli, David J, Leal-Bertioli, Soraya C M, Pandey, Manish K, Vaughn, Justin, Abernathy, Brian, Barkley, Noelle A, Hovav, Ran, Burow, Mark, Nayak, Spurthi N, Chitikineni, Annapurna, Isleib, Thomas G, Holbrook, C Corley, Jackson, Scott A, Varshney, Rajeev K, Ozias-Akins, Peggy
Published in Molecular plant (13.02.2017)
Published in Molecular plant (13.02.2017)
Get full text
Journal Article
Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean
Fang, Chao, Li, Congcong, Li, Weiyu, Wang, Zheng, Zhou, Zhengkui, Shen, Yanting, Wu, Mian, Wu, Yunshuai, Li, Guiquan, Kong, Ling‐An, Liu, Cuimin, Jackson, Scott A, Tian, Zhixi
Published in The Plant journal : for cell and molecular biology (01.03.2014)
Published in The Plant journal : for cell and molecular biology (01.03.2014)
Get full text
Journal Article