Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
Wu, G Albert, Prochnik, Simon, Jenkins, Jerry, Salse, Jerome, Hellsten, Uffe, Murat, Florent, Perrier, Xavier, Ruiz, Manuel, Scalabrin, Simone, Terol, Javier, Takita, Marco Aurélio, Labadie, Karine, Poulain, Julie, Couloux, Arnaud, Jabbari, Kamel, Cattonaro, Federica, Del Fabbro, Cristian, Pinosio, Sara, Zuccolo, Andrea, Chapman, Jarrod, Grimwood, Jane, Tadeo, Francisco R, Estornell, Leandro H, Muñoz-Sanz, Juan V, Ibanez, Victoria, Herrero-Ortega, Amparo, Aleza, Pablo, Pérez-Pérez, Julián, Ramón, Daniel, Brunel, Dominique, Luro, François, Chen, Chunxian, Farmerie, William G, Desany, Brian, Kodira, Chinnappa, Mohiuddin, Mohammed, Harkins, Tim, Fredrikson, Karin, Burns, Paul, Lomsadze, Alexandre, Borodovsky, Mark, Reforgiato, Giuseppe, Freitas-Astúa, Juliana, Quetier, Francis, Navarro, Luis, Roose, Mikeal, Wincker, Patrick, Schmutz, Jeremy, Morgante, Michele, Machado, Marcos Antonio, Talon, Manuel, Jaillon, Olivier, Ollitrault, Patrick, Gmitter, Frederick, Rokhsar, Daniel
Published in Nature biotechnology (01.07.2014)
Published in Nature biotechnology (01.07.2014)
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Journal Article
A common genomic code for chromatin architecture and recombination landscape
Jabbari, Kamel, Wirtz, Johannes, Rauscher, Martina, Wiehe, Thomas
Published in PloS one (13.03.2019)
Published in PloS one (13.03.2019)
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Journal Article
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
Cock, J. Mark, Sterck, Lieven, Rouzé, Pierre, Scornet, Delphine, Allen, Andrew E, Amoutzias, Grigoris, Anthouard, Veronique, Artiguenave, François, Aury, Jean-Marc, Badger, Jonathan H, Beszteri, Bank, Billiau, Kenny, Bonnet, Eric, Bothwell, John H, Bowler, Chris, Boyen, Catherine, Brownlee, Colin, Carrano, Carl J, Charrier, Bénédicte, Cho, Ga Youn, Coelho, Susana M, Collén, Jonas, Corre, Erwan, Da Silva, Corinne, Delage, Ludovic, Delaroque, Nicolas, Dittami, Simon M, Doulbeau, Sylvie, Elias, Marek, Farnham, Garry, Gachon, Claire M. M, Gschloessl, Bernhard, Heesch, Svenja, Jabbari, Kamel, Jubin, Claire, Kawai, Hiroshi, Kimura, Kei, Kloareg, Bernard, Küpper, Frithjof C, Lang, Daniel, Le Bail, Aude, Leblanc, Catherine, Lerouge, Patrice, Lohr, Martin, Lopez, Pascal J, Martens, Cindy, Maumus, Florian, Michel, Gurvan, Miranda-Saavedra, Diego, Morales, Julia, Moreau, Hervé, Motomura, Taizo, Nagasato, Chikako, Napoli, Carolyn A, Nelson, David R, Nyvall-Collén, Pi, Peters, Akira F, Pommier, Cyril, Potin, Philippe, Poulain, Julie, Quesneville, Hadi, Read, Betsy, Rensing, Stefan A, Ritter, Andrés, Rousvoal, Sylvie, Samanta, Manoj, Samson, Gaelle, Schroeder, Declan C, Ségurens, Béatrice, Strittmatter, Martina, Tonon, Thierry, Tregear, James W, Valentin, Klaus, von Dassow, Peter, Yamagishi, Takahiro, Van de Peer, Yves, Wincker, Patrick
Published in Nature (London) (03.06.2010)
Published in Nature (London) (03.06.2010)
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Journal Article
Transcription factor families inferred from genome sequences of photosynthetic stramenopiles
Rayko, Edda, Maumus, Florian, Maheswari, Uma, Jabbari, Kamel, Bowler, Chris
Published in The New phytologist (01.10.2010)
Published in The New phytologist (01.10.2010)
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Journal Article
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida
Collén, Jonas, Porcel, Betina, Carré, Wilfrid, Ball, Steven G., Chaparro, Cristian, Tonon, Thierry, Barbeyron, Tristan, Michel, Gurvan, Noel, Benjamin, Valentin, Klaus, Elias, Marek, Artiguenave, François, Arun, Alok, Aury, Jean-Marc, Barbosa-Neto, José F., Bothwell, John H., Bouget, François-Yves, Brillet, Loraine, Cabello-Hurtado, Francisco, Capella-Gutiérrez, Salvador, Charrier, Bénédicte, Cladière, Lionel, Cock, J. Mark, Coelho, Susana M., Colleoni, Christophe, Czjzek, Mirjam, Da Silva, Corinne, Delage, Ludovic, Denoeud, France, Deschamps, Philippe, Dittami, Simon M., Gabaldón, Toni, Gachon, Claire M. M., Groisillier, Agnès, Hervé, Cécile, Jabbari, Kamel, Katinka, Michael, Kloareg, Bernard, Kowalczyk, Nathalie, Labadie, Karine, Leblanc, Catherine, Lopez, Pascal J., McLachlan, Deirdre H., Meslet-Cladiere, Laurence, Moustafa, Ahmed, Nehr, Zofia, Collén, Pi Nyvall, Panaud, Olivier, Partensky, Frédéric, Poulain, Julie, Rensing, Stefan A., Rousvoal, Sylvie, Samson, Gaelle, Symeonidi, Aikaterini, Weissenbach, Jean, Zambounis, Antonios, Wincker, Patrick, Boyen, Catherine
Published in Proceedings of the National Academy of Sciences - PNAS (26.03.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (26.03.2013)
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Journal Article
LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology
Driguez, Patrick, Bougouffa, Salim, Carty, Karen, Putra, Alexander, Jabbari, Kamel, Reddy, Muppala, Soppe, Richard, Cheung, Ming Sin, Fukasawa, Yoshinori, Ermini, Luca
Published in Genome Biology (03.09.2021)
Published in Genome Biology (03.09.2021)
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Journal Article
DEPDC5 mutations in genetic focal epilepsies of childhood
Lal, Dennis, Reinthaler, Eva M., Schubert, Julian, Muhle, Hiltrud, Riesch, Erik, Kluger, Gerhard, Jabbari, Kamel, Kawalia, Amit, Bäumel, Christine, Holthausen, Hans, Hahn, Andreas, Feucht, Martha, Neophytou, Birgit, Haberlandt, Edda, Becker, Felicitas, Altmüller, Janine, Thiele, Holger, Lemke, Johannes R., Lerche, Holger, Nürnberg, Peter, Sander, Thomas, Weber, Yvonne, Zimprich, Fritz, Neubauer, Bernd A.
Published in Annals of neurology (01.05.2014)
Published in Annals of neurology (01.05.2014)
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Journal Article
Potential impact of stress activated retrotransposons on genome evolution in a marine diatom
Maumus, Florian, Allen, Andrew E, Mhiri, Corinne, Hu, Hanhua, Jabbari, Kamel, Vardi, Assaf, Grandbastien, Marie-Angèle, Bowler, Chris
Published in BMC genomics (22.12.2009)
Published in BMC genomics (22.12.2009)
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Journal Article
The Tiny Eukaryote Ostreococcus Provides Genomic Insights into the Paradox of Plankton Speciation
Palenik, Brian, Grimwood, Jane, Aerts, Andrea, Rouzé, Pierre, Salamov, Asaf, Putnam, Nicholas, Dupont, Chris, Jorgensen, Richard, Derelle, Evelyne, Rombauts, Stephane, Zhou, Kemin, Otillar, Robert, Merchant, Sabeeha S., Podell, Sheila, Gaasterland, Terry, Napoli, Carolyn, Gendler, Karla, Manuell, Andrea, Tai, Vera, Vallon, Olivier, Piganeau, Gwenael, Jancek, Séverine, Heijde, Marc, Jabbari, Kamel, Bowler, Chris, Lohr, Martin, Robbens, Steven, Werner, Gregory, Dubchak, Inna, Pazour, Gregory J., Ren, Qinghu, Paulsen, Ian, Delwiche, Chuck, Schmutz, Jeremy, Rokhsar, Daniel, Van de Peer, Yves, Moreau, Hervé, Grigoriev, Igor V.
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2007)
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Journal Article
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features
Derelle, E, Ferraz, C, Rombauts, S, Rouze, P, Worden, A.Z, Robbens, S, Partensky, F, Degroeve, S, Echeynie, S, Cooke, R
Published in Proceedings of the National Academy of Sciences - PNAS (01.08.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (01.08.2006)
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Journal Article
Leveraging the power of high performance computing for next generation sequencing data analysis: tricks and twists from a high throughput exome workflow
Kawalia, Amit, Motameny, Susanne, Wonczak, Stephan, Thiele, Holger, Nieroda, Lech, Jabbari, Kamel, Borowski, Stefan, Sinha, Vishal, Gunia, Wilfried, Lang, Ulrich, Achter, Viktor, Nürnberg, Peter
Published in PloS one (05.05.2015)
Published in PloS one (05.05.2015)
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Journal Article
The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants
Porcel, Betina M, Denoeud, France, Opperdoes, Fred, Noel, Benjamin, Madoui, Mohammed-Amine, Hammarton, Tansy C, Field, Mark C, Da Silva, Corinne, Couloux, Arnaud, Poulain, Julie, Katinka, Michael, Jabbari, Kamel, Aury, Jean-Marc, Campbell, David A, Cintron, Roxana, Dickens, Nicholas J, Docampo, Roberto, Sturm, Nancy R, Koumandou, V Lila, Fabre, Sandrine, Flegontov, Pavel, Lukeš, Julius, Michaeli, Shulamit, Mottram, Jeremy C, Szöőr, Balázs, Zilberstein, Dan, Bringaud, Frédéric, Wincker, Patrick, Dollet, Michel
Published in PLoS genetics (01.02.2014)
Published in PLoS genetics (01.02.2014)
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Journal Article
The Diverging Routes of BORIS and CTCF: An Interactomic and Phylogenomic Analysis
Jabbari, Kamel, Heger, Peter, Sharma, Ranu, Wiehe, Thomas
Published in Life (Basel, Switzerland) (30.01.2018)
Published in Life (Basel, Switzerland) (30.01.2018)
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Journal Article
Rare gene deletions in genetic generalized and Rolandic epilepsies
Jabbari, Kamel, Bobbili, Dheeraj R, Lal, Dennis, Reinthaler, Eva M, Schubert, Julian, Wolking, Stefan, Sinha, Vishal, Motameny, Susanne, Thiele, Holger, Kawalia, Amit, Altmüller, Janine, Toliat, Mohammad Reza, Kraaij, Robert, van Rooij, Jeroen, Uitterlinden, André G, Ikram, M Arfan, Zara, Federico, Lehesjoki, Anna-Elina, Krause, Roland, Zimprich, Fritz, Sander, Thomas, Neubauer, Bernd A, May, Patrick, Lerche, Holger, Nürnberg, Peter
Published in PloS one (27.08.2018)
Published in PloS one (27.08.2018)
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Journal Article
Comparative genomics of the pennate diatom Phaeodactylum tricornutum
Montsant, A, Jabbari, K, Maheswari, U, Bowler, C
Published in Plant physiology (Bethesda) (01.02.2005)
Published in Plant physiology (Bethesda) (01.02.2005)
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Journal Article
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
Bowler, Chris, Allen, Andrew E, Badger, Jonathan H, Grimwood, Jane, Jabbari, Kamel, Kuo, Alan, Maheswari, Uma, Martens, Cindy, Maumus, Florian, Otillar, Robert P, Rayko, Edda, Salamov, Asaf, Vandepoele, Klaas, Beszteri, Bank, Gruber, Ansgar, Heijde, Marc, Katinka, Michael, Mock, Thomas, Valentin, Klaus, Verret, Fréderic, Berges, John A, Brownlee, Colin, Cadoret, Jean-Paul, Chiovitti, Anthony, Choi, Chang Jae, Coesel, Sacha, De Martino, Alessandra, Detter, J. Chris, Durkin, Colleen, Falciatore, Angela, Fournet, Jérome, Haruta, Miyoshi, Huysman, Marie J. J, Jenkins, Bethany D, Jiroutova, Katerina, Jorgensen, Richard E, Joubert, Yolaine, Kaplan, Aaron, Kröger, Nils, Kroth, Peter G, La Roche, Julie, Lindquist, Erica, Lommer, Markus, Martin-Jézéquel, Véronique, Lopez, Pascal J, Lucas, Susan, Mangogna, Manuela, McGinnis, Karen, Medlin, Linda K, Montsant, Anton, Secq, Marie-Pierre Oudot-Le, Napoli, Carolyn, Obornik, Miroslav, Parker, Micaela Schnitzler, Petit, Jean-Louis, Porcel, Betina M, Poulsen, Nicole, Robison, Matthew, Rychlewski, Leszek, Rynearson, Tatiana A, Schmutz, Jeremy, Shapiro, Harris, Siaut, Magali, Stanley, Michele, Sussman, Michael R, Taylor, Alison R, Vardi, Assaf, von Dassow, Peter, Vyverman, Wim, Willis, Anusuya, Wyrwicz, Lucjan S, Rokhsar, Daniel S, Weissenbach, Jean, Armbrust, E. Virginia, Green, Beverley R, Van de Peer, Yves, Grigoriev, Igor V
Published in Nature (13.11.2008)
Published in Nature (13.11.2008)
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Journal Article
Similar integration but different stability of Alus and LINEs in the human genome
Pavlícek, A, Jabbari, K, Paces, J, Paces, V, Hejnar, J V, Bernardi, G
Published in Gene (03.10.2001)
Published in Gene (03.10.2001)
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