MARS-seq2.0: an experimental and analytical pipeline for indexed sorting combined with single-cell RNA sequencing
Keren-Shaul, Hadas, Kenigsberg, Ephraim, Jaitin, Diego Adhemar, David, Eyal, Paul, Franziska, Tanay, Amos, Amit, Ido
Published in Nature protocols (01.06.2019)
Published in Nature protocols (01.06.2019)
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Journal Article
Single-cell transcriptome conservation in cryopreserved cells and tissues
Guillaumet-Adkins, Amy, Rodríguez-Esteban, Gustavo, Mereu, Elisabetta, Mendez-Lago, Maria, Jaitin, Diego A, Villanueva, Alberto, Vidal, August, Martinez-Marti, Alex, Felip, Enriqueta, Vivancos, Ana, Keren-Shaul, Hadas, Heath, Simon, Gut, Marta, Amit, Ido, Gut, Ivo, Heyn, Holger
Published in Genome Biology (01.03.2017)
Published in Genome Biology (01.03.2017)
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Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations
Thaiss, Christoph A., Levy, Maayan, Korem, Tal, Dohnalová, Lenka, Shapiro, Hagit, Jaitin, Diego A., David, Eyal, Winter, Deborah R., Gury-BenAri, Meital, Tatirovsky, Evgeny, Tuganbaev, Timur, Federici, Sara, Zmora, Niv, Zeevi, David, Dori-Bachash, Mally, Pevsner-Fischer, Meirav, Kartvelishvily, Elena, Brandis, Alexander, Harmelin, Alon, Shibolet, Oren, Halpern, Zamir, Honda, Kenya, Amit, Ido, Segal, Eran, Elinav, Eran
Published in Cell (01.12.2016)
Published in Cell (01.12.2016)
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Journal Article
Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors
Paul, Franziska, Arkin, Ya’ara, Giladi, Amir, Jaitin, Diego Adhemar, Kenigsberg, Ephraim, Keren-Shaul, Hadas, Winter, Deborah, Lara-Astiaso, David, Gury, Meital, Weiner, Assaf, David, Eyal, Cohen, Nadav, Lauridsen, Felicia Kathrine Bratt, Haas, Simon, Schlitzer, Andreas, Mildner, Alexander, Ginhoux, Florent, Jung, Steffen, Trumpp, Andreas, Porse, Bo Torben, Tanay, Amos, Amit, Ido
Published in Cell (17.12.2015)
Published in Cell (17.12.2015)
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Deterministic direct reprogramming of somatic cells to pluripotency
Rais, Yoach, Zviran, Asaf, Geula, Shay, Gafni, Ohad, Chomsky, Elad, Viukov, Sergey, Mansour, Abed AlFatah, Caspi, Inbal, Krupalnik, Vladislav, Zerbib, Mirie, Maza, Itay, Mor, Nofar, Baran, Dror, Weinberger, Leehee, Jaitin, Diego A, Lara-Astiaso, David, Blecher-Gonen, Ronnie, Shipony, Zohar, Mukamel, Zohar, Hagai, Tzachi, Gilad, Shlomit, Amann-Zalcenstein, Daniela, Tanay, Amos, Amit, Ido, Novershtern, Noa, Hanna, Jacob H
Published in Nature (London) (01.10.2013)
Published in Nature (London) (01.10.2013)
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Journal Article
Host microbiota constantly control maturation and function of microglia in the CNS
Erny, Daniel, Hrabě de Angelis, Anna Lena, Jaitin, Diego, Wieghofer, Peter, Staszewski, Ori, David, Eyal, Keren-Shaul, Hadas, Mahlakoiv, Tanel, Jakobshagen, Kristin, Buch, Thorsten, Schwierzeck, Vera, Utermöhlen, Olaf, Chun, Eunyoung, Garrett, Wendy S, McCoy, Kathy D, Diefenbach, Andreas, Staeheli, Peter, Stecher, Bärbel, Amit, Ido, Prinz, Marco
Published in Nature neuroscience (01.07.2015)
Published in Nature neuroscience (01.07.2015)
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High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states
Blecher-Gonen, Ronnie, Barnett-Itzhaki, Zohar, Jaitin, Diego, Amann-Zalcenstein, Daniela, Lara-Astiaso, David, Amit, Ido
Published in Nature protocols (01.03.2013)
Published in Nature protocols (01.03.2013)
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XCR1 + type 1 conventional dendritic cells drive liver pathology in non-alcoholic steatohepatitis
Deczkowska, Aleksandra, David, Eyal, Ramadori, Pierluigi, Pfister, Dominik, Safran, Michal, Li, Baoguo, Giladi, Amir, Jaitin, Diego Adhemar, Barboy, Oren, Cohen, Merav, Yofe, Ido, Gur, Chamutal, Shlomi-Loubaton, Shir, Henri, Sandrine, Suhail, Yousuf, Qiu, Mengjie, Kam, Shing, Hermon, Hila, Lahat, Eylon, Ben Yakov, Gil, Cohen-Ezra, Oranit, Davidov, Yana, Likhter, Mariya, Goitein, David, Roth, Susanne, Weber, Achim, Malissen, Bernard, Weiner, Assaf, Ben-Ari, Ziv, Heikenwälder, Mathias, Elinav, Eran, Amit, Ido
Published in Nature Medicine (01.06.2021)
Published in Nature Medicine (01.06.2021)
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Extracellular Matrix Proteolysis by MT1-MMP Contributes to Influenza-Related Tissue Damage and Mortality
Talmi-Frank, Dalit, Altboum, Zeev, Solomonov, Inna, Udi, Yael, Jaitin, Diego Adhemar, Klepfish, Mordehay, David, Eyal, Zhuravlev, Alina, Keren-Shaul, Hadas, Winter, Deborah R., Gat-Viks, Irit, Mandelboim, Michal, Ziv, Tamar, Amit, Ido, Sagi, Irit
Published in Cell host & microbe (12.10.2016)
Published in Cell host & microbe (12.10.2016)
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The Stability of the Ternary Interferon-Receptor Complex Rather than the Affinity to the Individual Subunits Dictates Differential Biological Activities
Kalie, Eyal, Jaitin, Diego A., Podoplelova, Yulia, Piehler, Jacob, Schreiber, Gideon
Published in The Journal of biological chemistry (21.11.2008)
Published in The Journal of biological chemistry (21.11.2008)
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Journal Article
Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors
Paul, Franziska, Arkin, Ya’ara, Giladi, Amir, Jaitin, Diego Adhemar, Kenigsberg, Ephraim, Keren-Shaul, Hadas, Winter, Deborah, Lara-Astiaso, David, Gury, Meital, Weiner, Assaf, David, Eyal, Cohen, Nadav, Lauridsen, Felicia Kathrine Bratt, Haas, Simon, Schlitzer, Andreas, Mildner, Alexander, Ginhoux, Florent, Jung, Steffen, Trumpp, Andreas, Porse, Bo Torben, Tanay, Amos, Amit, Ido
Published in Cell (14.01.2016)
Published in Cell (14.01.2016)
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Dissection of floral transition by single-meristem transcriptomes at high temporal resolution
Meir, Zohar, Aviezer, Iris, Chongloi, Grace Lhaineikim, Ben-Kiki, Oren, Bronstein, Revital, Mukamel, Zohar, Keren-Shaul, Hadas, Jaitin, Diego, Tal, Lior, Shalev-Schlosser, Gili, Harel, Tom Hai, Tanay, Amos, Eshed, Yuval
Published in Nature plants (01.06.2021)
Published in Nature plants (01.06.2021)
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Lipid-Associated Macrophages Control Metabolic Homeostasis in a Trem2-Dependent Manner
Jaitin, Diego Adhemar, Adlung, Lorenz, Thaiss, Christoph A., Weiner, Assaf, Li, Baoguo, Descamps, Hélène, Lundgren, Patrick, Bleriot, Camille, Liu, Zhaoyuan, Deczkowska, Aleksandra, Keren-Shaul, Hadas, David, Eyal, Zmora, Niv, Eldar, Shai Meron, Lubezky, Nir, Shibolet, Oren, Hill, David A., Lazar, Mitchell A., Colonna, Marco, Ginhoux, Florent, Shapiro, Hagit, Elinav, Eran, Amit, Ido
Published in Cell (25.07.2019)
Published in Cell (25.07.2019)
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Chromatin state dynamics during blood formation
Lara-Astiaso, David, Weiner, Assaf, Lorenzo-Vivas, Erika, Zaretsky, Irina, Jaitin, Diego Adhemar, David, Eyal, Keren-Shaul, Hadas, Mildner, Alexander, Winter, Deborah, Jung, Steffen, Friedman, Nir, Amit, Ido
Published in Science (American Association for the Advancement of Science) (22.08.2014)
Published in Science (American Association for the Advancement of Science) (22.08.2014)
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Publisher Correction: XCR1 + type 1 conventional dendritic cells drive liver pathology in non-alcoholic steatohepatitis
Deczkowska, Aleksandra, David, Eyal, Ramadori, Pierluigi, Pfister, Dominik, Safran, Michal, Li, Baoguo, Giladi, Amir, Jaitin, Diego Adhemar, Barboy, Oren, Cohen, Merav, Yofe, Ido, Gur, Chamutal, Shlomi-Loubaton, Shir, Henri, Sandrine, Suhail, Yousuf, Qiu, Mengjie, Kam, Shing, Hermon, Hila, Lahat, Eylon, Ben Yakov, Gil, Cohen-Ezra, Oranit, Davidov, Yana, Likhter, Mariya, Goitein, David, Roth, Susanne, Weber, Achim, Malissen, Bernard, Weiner, Assaf, Ben-Ari, Ziv, Heikenwälder, Mathias, Elinav, Eran, Amit, Ido
Published in Nature Medicine (01.01.2022)
Published in Nature Medicine (01.01.2022)
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DC Respond to Cognate T Cell Interaction in the Antigen-Challenged Lymph Node
Curato, Caterina, Bernshtein, Biana, Zupancič, Eva, Dufner, Almut, Jaitin, Diego, Giladi, Amir, David, Eyal, Chappell-Maor, Louise, Leshkowitz, Dena, Knobeloch, Klaus-Peter, Amit, Ido, Florindo, Helena F, Jung, Steffen
Published in Frontiers in immunology (25.04.2019)
Published in Frontiers in immunology (25.04.2019)
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Physically interacting beta-delta pairs in the regenerating pancreas revealed by single-cell sequencing
Yanowski, Eran, Yacovzada, Nancy S., David, Eyal, Giladi, Amir, Jaitin, Diego, Farack, Lydia, Egozi, Adi, Ben-Zvi, Danny, Itzkovitz, Shalev, Amit, Ido, Hornstein, Eran
Published in Molecular metabolism (Germany) (01.06.2022)
Published in Molecular metabolism (Germany) (01.06.2022)
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Chronic exposure to TGFβ1 regulates myeloid cell inflammatory response in an IRF7-dependent manner
Cohen, Merav, Matcovitch, Orit, David, Eyal, Barnett-Itzhaki, Zohar, Keren-Shaul, Hadas, Blecher-Gonen, Ronnie, Jaitin, Diego Adhemar, Sica, Antonio, Amit, Ido, Schwartz, Michal
Published in The EMBO journal (17.12.2014)
Published in The EMBO journal (17.12.2014)
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Journal Article
Sequential Feedback Induction Stabilizes the Phosphate Starvation Response in Budding Yeast
Vardi, Noam, Levy, Sagi, Gurvich, Yonat, Polacheck, Tamar, Carmi, Miri, Jaitin, Diego, Amit, Ido, Barkai, Naama
Published in Cell reports (Cambridge) (06.11.2014)
Published in Cell reports (Cambridge) (06.11.2014)
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