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Published in Genome medicine (31.12.2019)
Published in Genome medicine (31.12.2019)
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Modeling glioblastoma heterogeneity as a dynamic network of cell states
Larsson, Ida, Dalmo, Erika, Elgendy, Ramy, Niklasson, Mia, Doroszko, Milena, Segerman, Anna, Jörnsten, Rebecka, Westermark, Bengt, Nelander, Sven
Published in Molecular systems biology (01.09.2021)
Published in Molecular systems biology (01.09.2021)
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Sources of variation in cell-type RNA-Seq profiles
Gustafsson, Johan, Held, Felix, Robinson, Jonathan L, Björnson, Elias, Jörnsten, Rebecka, Nielsen, Jens
Published in PloS one (21.09.2020)
Published in PloS one (21.09.2020)
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Integrative discovery of treatments for high-risk neuroblastoma
Almstedt, Elin, Elgendy, Ramy, Hekmati, Neda, Rosén, Emil, Wärn, Caroline, Olsen, Thale Kristin, Dyberg, Cecilia, Doroszko, Milena, Larsson, Ida, Sundström, Anders, Arsenian Henriksson, Marie, Påhlman, Sven, Bexell, Daniel, Vanlandewijck, Michael, Kogner, Per, Jörnsten, Rebecka, Krona, Cecilia, Nelander, Sven
Published in Nature communications (03.01.2020)
Published in Nature communications (03.01.2020)
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DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure
Nestor, Colm E, Barrenäs, Fredrik, Wang, Hui, Lentini, Antonio, Zhang, Huan, Bruhn, Sören, Jörnsten, Rebecka, Langston, Michael A, Rogers, Gary, Gustafsson, Mika, Benson, Mikael
Published in PLoS genetics (01.01.2014)
Published in PLoS genetics (01.01.2014)
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DSAVE: Detection of misclassified cells in single-cell RNA-Seq data
Gustafsson, Johan, Robinson, Jonathan, Inda-Díaz, Juan S, Björnson, Elias, Jörnsten, Rebecka, Nielsen, Jens
Published in PloS one (03.12.2020)
Published in PloS one (03.12.2020)
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Dose-response relationships of intestinal organs and excessive mucus discharge after gynaecological radiotherapy
Alevronta, Eleftheria, Skokic, Viktor, Dunberger, Gail, Bull, Cecilia, Bergmark, Karin, Jörnsten, Rebecka, Steineck, Gunnar
Published in PloS one (16.04.2021)
Published in PloS one (16.04.2021)
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Identifying radiation-induced survivorship syndromes affecting bowel health in a cohort of gynecological cancer survivors
Steineck, Gunnar, Skokic, Viktor, Sjöberg, Fei, Bull, Cecilia, Alevronta, Eleftheria, Dunberger, Gail, Bergmark, Karin, Wilderäng, Ulrica, Oh, Jung Hun, Deasy, Joseph O, Jörnsten, Rebecka
Published in PloS one (03.02.2017)
Published in PloS one (03.02.2017)
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MicroRNA expression pattern of undifferentiated and differentiated human embryonic stem cells
Lakshmipathy, Uma, Love, Brad, Goff, Loyal A, Jörnsten, Rebecka, Graichen, Ralph, Hart, Ronald P, Chesnut, Jonathan D
Published in Stem cells and development (01.12.2007)
Published in Stem cells and development (01.12.2007)
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Network modeling of the transcriptional effects of copy number aberrations in glioblastoma
Jörnsten, Rebecka, Abenius, Tobias, Kling, Teresia, Schmidt, Linnéa, Johansson, Erik, Nordling, Torbjörn E M, Nordlander, Bodil, Sander, Chris, Gennemark, Peter, Funa, Keiko, Nilsson, Björn, Lindahl, Linda, Nelander, Sven
Published in Molecular systems biology (2011)
Published in Molecular systems biology (2011)
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Searching for synergies: matrix algebraic approaches for efficient pair screening
Gerlee, Philip, Schmidt, Linnéa, Monsefi, Naser, Kling, Teresia, Jörnsten, Rebecka, Nelander, Sven
Published in PloS one (25.07.2013)
Published in PloS one (25.07.2013)
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LASSIM-A network inference toolbox for genome-wide mechanistic modeling
Magnusson, Rasmus, Mariotti, Guido Pio, Köpsén, Mattias, Lövfors, William, Gawel, Danuta R, Jörnsten, Rebecka, Linde, Jörg, Nordling, Torbjörn E M, Nyman, Elin, Schulze, Sylvie, Nestor, Colm E, Zhang, Huan, Cedersund, Gunnar, Benson, Mikael, Tjärnberg, Andreas, Gustafsson, Mika
Published in PLoS computational biology (01.06.2017)
Published in PLoS computational biology (01.06.2017)
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Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms
Barrenäs, Fredrik, Chavali, Sreenivas, Alves, Alexessander Couto, Coin, Lachlan, Jarvelin, Marjo-Riitta, Jörnsten, Rebecka, Langston, Michael A, Ramasamy, Adaikalavan, Rogers, Gary, Wang, Hui, Benson, Mikael
Published in Genome Biology (15.06.2012)
Published in Genome Biology (15.06.2012)
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A 6-gene signature identifies four molecular subgroups of neuroblastoma
Abel, Frida, Dalevi, Daniel, Nethander, Maria, Jörnsten, Rebecka, De Preter, Katleen, Vermeulen, Joëlle, Stallings, Raymond, Kogner, Per, Maris, John, Nilsson, Staffan
Published in Cancer cell international (14.04.2011)
Published in Cancer cell international (14.04.2011)
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Integrative Modeling Reveals Annexin A2-mediated Epigenetic Control of Mesenchymal Glioblastoma
Kling, Teresia, Ferrarese, Roberto, Ó hAilín, Darren, Johansson, Patrik, Heiland, Dieter Henrik, Dai, Fangping, Vasilikos, Ioannis, Weyerbrock, Astrid, Jörnsten, Rebecka, Carro, Maria Stella, Nelander, Sven
Published in EBioMedicine (01.10.2016)
Published in EBioMedicine (01.10.2016)
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Generation and analysis of context-specific genome-scale metabolic models derived from-cell data
Gustafsson, J., Anton, M., Roshanzamir, F., Jörnsten, Rebecka, Kerkhoven, E. J., Robinson, J. L., Nielsen, J.
Published in Proceedings of the National Academy of Sciences - PNAS (07.02.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (07.02.2023)
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