Automatic assessment of glioma burden: a deep learning algorithm for fully automated volumetric and bidimensional measurement
Chang, Ken, Beers, Andrew L, Bai, Harrison X, Brown, James M, Ly, K Ina, Li, Xuejun, Senders, Joeky T, Kavouridis, Vasileios K, Boaro, Alessandro, Su, Chang, Bi, Wenya Linda, Rapalino, Otto, Liao, Weihua, Shen, Qin, Zhou, Hao, Xiao, Bo, Wang, Yinyan, Zhang, Paul J, Pinho, Marco C, Wen, Patrick Y, Batchelor, Tracy T, Boxerman, Jerrold L, Arnaout, Omar, Rosen, Bruce R, Gerstner, Elizabeth R, Yang, Li, Huang, Raymond Y, Kalpathy-Cramer, Jayashree
Published in Neuro-oncology (Charlottesville, Va.) (04.11.2019)
Published in Neuro-oncology (Charlottesville, Va.) (04.11.2019)
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Pharmacodynamics of mutant-IDH1 inhibitors in glioma patients probed by in vivo 3D MRS imaging of 2-hydroxyglutarate
Andronesi, Ovidiu C., Arrillaga-Romany, Isabel C., Ly, K. Ina, Bogner, Wolfgang, Ratai, Eva M., Reitz, Kara, Iafrate, A. John, Dietrich, Jorg, Gerstner, Elizabeth R., Chi, Andrew S., Rosen, Bruce R., Wen, Patrick Y., Cahill, Daniel P., Batchelor, Tracy T.
Published in Nature communications (16.04.2018)
Published in Nature communications (16.04.2018)
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Automated quantification and integrative analysis of 2D and 3D mitochondrial shape and network properties
Nikolaisen, Julie, Nilsson, Linn I H, Pettersen, Ina K N, Willems, Peter H G M, Lorens, James B, Koopman, Werner J H, Tronstad, Karl J
Published in PloS one (02.07.2014)
Published in PloS one (02.07.2014)
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Bavituximab Decreases Immunosuppressive Myeloid-Derived Suppressor Cells in Newly Diagnosed Glioblastoma Patients
Ly, K Ina, Richardson, Leland G, Liu, Mofei, Muzikansky, Alona, Cardona, Jonathan, Lou, Kevin, Beers, Andrew L, Chang, Ken, Brown, James M, Ma, Xiaoyue, Reardon, David A, Arrillaga-Romany, Isabel C, Forst, Deborah A, Jordan, Justin T, Lee, Eudocia Q, Dietrich, Jorg, Nayak, Lakshmi, Wen, Patrick Y, Chukwueke, Ugonma, Giobbie-Hurder, Anita, Choi, Bryan D, Batchelor, Tracy T, Kalpathy-Cramer, Jayashree, Curry, William T, Gerstner, Elizabeth R
Published in Clinical cancer research (15.08.2023)
Published in Clinical cancer research (15.08.2023)
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DeepNeuro: an open-source deep learning toolbox for neuroimaging
Beers, Andrew, Brown, James, Chang, Ken, Hoebel, Katharina, Patel, Jay, Ly, K. Ina, Tolaney, Sara M., Brastianos, Priscilla, Rosen, Bruce, Gerstner, Elizabeth R., Kalpathy-Cramer, Jayashree
Published in Neuroinformatics (Totowa, N.J.) (2021)
Published in Neuroinformatics (Totowa, N.J.) (2021)
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DINs: Deep Interactive Networks for Neurofibroma Segmentation in Neurofibromatosis Type 1 on Whole-Body MRI
Zhang, Jian-Wei, Chen, Wei, Ly, K. Ina, Zhang, Xubin, Yan, Fan, Jordan, Justin, Harris, Gordon, Plotkin, Scott, Hao, Pengyi, Cai, Wenli
Published in IEEE journal of biomedical and health informatics (01.02.2022)
Published in IEEE journal of biomedical and health informatics (01.02.2022)
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Inhibiting Notch Activity in Breast Cancer Stem Cells by Glucose Functionalized Nanoparticles Carrying γ-secretase Inhibitors
Mamaeva, Veronika, Niemi, Rasmus, Beck, Michaela, Özliseli, Ezgi, Desai, Diti, Landor, Sebastian, Gronroos, Tove, Kronqvist, Pauliina, Pettersen, Ina K N, McCormack, Emmet, Rosenholm, Jessica M, Linden, Mika, Sahlgren, Cecilia
Published in Molecular therapy (01.05.2016)
Published in Molecular therapy (01.05.2016)
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Probing tumor microenvironment in patients with newly diagnosed glioblastoma during chemoradiation and adjuvant temozolomide with functional MRI
Ly, K. Ina, Vakulenko-Lagun, Bella, Emblem, Kyrre E., Ou, Yangming, Da, Xiao, Betensky, Rebecca A., Kalpathy-Cramer, Jayashree, Duda, Dan G., Jain, Rakesh K., Chi, Andrew S., Plotkin, Scott R., Batchelor, Tracy T., Sorensen, Gregory, Rosen, Bruce R., Gerstner, Elizabeth R.
Published in Scientific reports (20.11.2018)
Published in Scientific reports (20.11.2018)
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Epithelial to mesenchymal transition (EMT) is associated with attenuation of succinate dehydrogenase (SDH) in breast cancer through reduced expression of SDHC
Røsland, Gro V, Dyrstad, Sissel E, Tusubira, Deusdedit, Helwa, Reham, Tan, Tuan Zea, Lotsberg, Maria L, Pettersen, Ina K N, Berg, Anna, Kindt, Charlotte, Hoel, Fredrik, Jacobsen, Kirstine, Arason, Ari J, Engelsen, Agnete S T, Ditzel, Henrik J, Lønning, Per E, Krakstad, Camilla, Thiery, Jean P, Lorens, James B, Knappskog, Stian, Tronstad, Karl J
Published in Cancer & metabolism (01.06.2019)
Published in Cancer & metabolism (01.06.2019)
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Global analysis of the relationship between JIL-1 kinase and transcription
Regnard, Catherine, Straub, Tobias, Mitterweger, Angelika, Dahlsveen, Ina K, Fabian, Viola, Becker, Peter B
Published in PLoS genetics (01.03.2011)
Published in PLoS genetics (01.03.2011)
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Not without Context-A Multiple Methods Study on Evaluation and Correction of Automated Brain Tumor Segmentations by Experts
Hoebel, Katharina V, Bridge, Christopher P, Kim, Albert, Gerstner, Elizabeth R, Ly, Ina K, Deng, Francis, DeSalvo, Matthew N, Dietrich, Jorg, Huang, Raymond, Huang, Susie Y, Pomerantz, Stuart R, Vagvala, Saivenkat, Rosen, Bruce R, Kalpathy-Cramer, Jayashree
Published in Academic radiology (01.04.2024)
Published in Academic radiology (01.04.2024)
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Imaging Evaluation of Plexiform Neurofibromas in Neurofibromatosis Type 1: A Survey-Based Assessment
Ahlawat, Shivani, Ly, K Ina, Fayad, Laura M, Fisher, Michael J, Lessing, Andrés J, Berg, Dale J, Salamon, Johannes M, Mautner, Victor-Felix, Babovic-Vuksanovic, Dusica, Dombi, Eva, Harris, Gordon, Plotkin, Scott R, Blakeley, Jaishri
Published in Neurology (17.08.2021)
Published in Neurology (17.08.2021)
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Ten-Year Follow-up of Internal Neurofibroma Growth Behavior in Adult Patients With Neurofibromatosis Type 1 Using Whole-Body MRI
Ly, K Ina, Merker, Vanessa L, Cai, Wenli, Bredella, Miriam A, Muzikansky, Alona, Thalheimer, Raquel D, Da, Jennifer Liwei, Orr, Christina C, Herr, Hamilton P, Morris, Mary E, Chang, Connie Y, Harris, Gordon J, Plotkin, Scott R, Jordan, Justin T
Published in Neurology (14.02.2023)
Published in Neurology (14.02.2023)
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Subcellular Distribution of NAD+ between Cytosol and Mitochondria Determines the Metabolic Profile of Human Cells
VanLinden, Magali R., Dölle, Christian, Pettersen, Ina K.N., Kulikova, Veronika A., Niere, Marc, Agrimi, Gennaro, Dyrstad, Sissel E., Palmieri, Ferdinando, Nikiforov, Andrey A., Tronstad, Karl Johan, Ziegler, Mathias
Published in The Journal of biological chemistry (13.11.2015)
Published in The Journal of biological chemistry (13.11.2015)
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Improved microRNA quantification in total RNA from clinical samples
Andreasen, Ditte, Fog, Jacob U., Biggs, William, Salomon, Jesper, Dahslveen, Ina K., Baker, Adam, Mouritzen, Peter
Published in Methods (San Diego, Calif.) (01.04.2010)
Published in Methods (San Diego, Calif.) (01.04.2010)
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