scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets
Liu, Hongyu, Prashant, N M, Spurr, Liam F, Bousounis, Pavlos, Alomran, Nawaf, Ibeawuchi, Helen, Sein, Justin, Słowiński, Piotr, Tsaneva-Atanasova, Krasimira, Horvath, Anelia
Published in BMC genomics (08.01.2021)
Published in BMC genomics (08.01.2021)
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Improved SNV Discovery in Barcode-Stratified scRNA-seq Alignments
N M, Prashant, Liu, Hongyu, Dillard, Christian, Ibeawuchi, Helen, Alsaeedy, Turkey, Chan, Hang, Horvath, Anelia Dafinova
Published in Genes (30.09.2021)
Published in Genes (30.09.2021)
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Estimating the Allele-Specific Expression of SNVs From 10× Genomics Single-Cell RNA-Sequencing Data
M, Prashant N, Liu, Hongyu, Bousounis, Pavlos, Spurr, Liam, Alomran, Nawaf, Ibeawuchi, Helen, Sein, Justin, Reece-Stremtan, Dacian, Horvath, Anelia
Published in Genes (25.02.2020)
Published in Genes (25.02.2020)
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TRIM28 promotes luminal cell plasticity in a mouse model of prostate cancer
Yende, Ashutosh S, Williams, Emily C, Pletcher, Andrew, Helfand, Alexandra, Ibeawuchi, Helen, North, Tanya M, Latham, Patricia S, Horvath, Anelia, Shibata, Maho
Published in Oncogene (21.04.2023)
Published in Oncogene (21.04.2023)
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Journal Article
scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets
Liu, Hongyu, Nm Prashant, Spurr, Liam, Bousounis, Pavlos, Alomran, Nawaf, Ibeawuchi, Helen, Sein, Justin, Slowinski, Piotr M, Tsaneva-Atanasova, Krasimira, Horvath, Anelia
Published in bioRxiv (14.07.2020)
Published in bioRxiv (14.07.2020)
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