Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin
Bokulich, Nicholas A, Kaehler, Benjamin D, Rideout, Jai Ram, Dillon, Matthew, Bolyen, Evan, Knight, Rob, Huttley, Gavin A, Gregory Caporaso, J
Published in Microbiome (17.05.2018)
Published in Microbiome (17.05.2018)
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Journal Article
Statistical Methods for Identifying Sequence Motifs Affecting Point Mutations
Zhu, Yicheng, Neeman, Teresa, Yap, Von Bing, Huttley, Gavin A
Published in Genetics (Austin) (01.02.2017)
Published in Genetics (Austin) (01.02.2017)
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Journal Article
Dynamic evolution of venom proteins in squamate reptiles
Casewell, Nicholas R., Huttley, Gavin A., Wüster, Wolfgang
Published in Nature communications (2012)
Published in Nature communications (2012)
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Journal Article
Infection with a Virulent Strain of Wolbachia Disrupts Genome Wide-Patterns of Cytosine Methylation in the Mosquito Aedes aegypti
Ye, Yixin H, Woolfit, Megan, Huttley, Gavin A, Rancès, Edwige, Caragata, Eric P, Popovici, Jean, O'Neill, Scott L, McGraw, Elizabeth A
Published in PloS one (19.06.2013)
Published in PloS one (19.06.2013)
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Journal Article
Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages
Ying, Hua, Cooke, Ira, Sprungala, Susanne, Wang, Weiwen, Hayward, David C, Tang, Yurong, Huttley, Gavin, Ball, Eldon E, Forêt, Sylvain, Miller, David J
Published in Genome Biology (02.11.2018)
Published in Genome Biology (02.11.2018)
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Journal Article
Genetic Distance for a General Non-Stationary Markov Substitution Process
Kaehler, Benjamin D., Von Bing Yap, Zhang, Rongli, Huttley, Gavin A.
Published in Systematic biology (01.03.2015)
Published in Systematic biology (01.03.2015)
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Journal Article
Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics
Nekrasov, Maxim, Amrichova, Jana, Parker, Brian J, Soboleva, Tatiana A, Jack, Cameron, Williams, Rohan, Huttley, Gavin A, Tremethick, David J
Published in Nature structural & molecular biology (01.11.2012)
Published in Nature structural & molecular biology (01.11.2012)
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Journal Article
Transcriptome sequencing of two phenotypic mosaic Eucalyptus trees reveals large scale transcriptome re-modelling
Padovan, Amanda, Patel, Hardip R, Chuah, Aaron, Huttley, Gavin A, Krause, Sandra T, Degenhardt, Jörg, Foley, William J, Külheim, Carsten
Published in PloS one (15.05.2015)
Published in PloS one (15.05.2015)
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Journal Article
The embedding problem for markov models of nucleotide substitution
Verbyla, Klara L, Yap, Von Bing, Pahwa, Anuj, Shao, Yunli, Huttley, Gavin A
Published in PloS one (30.07.2013)
Published in PloS one (30.07.2013)
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Journal Article
PyCogent: a toolkit for making sense from sequence
Knight, Rob, Maxwell, Peter, Birmingham, Amanda, Carnes, Jason, Caporaso, J Gregory, Easton, Brett C, Eaton, Michael, Hamady, Micah, Lindsay, Helen, Liu, Zongzhi, Lozupone, Catherine, McDonald, Daniel, Robeson, Michael, Sammut, Raymond, Smit, Sandra, Wakefield, Matthew J, Widmann, Jeremy, Wikman, Shandy, Wilson, Stephanie, Ying, Hua, Huttley, Gavin A
Published in Genome biology (21.08.2007)
Published in Genome biology (21.08.2007)
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Journal Article
redbiom: a Rapid Sample Discovery and Feature Characterization System
McDonald, Daniel, Kaehler, Benjamin, Gonzalez, Antonio, DeReus, Jeff, Ackermann, Gail, Marotz, Clarisse, Huttley, Gavin, Knight, Rob
Published in mSystems (25.06.2019)
Published in mSystems (25.06.2019)
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Journal Article
Loss of ACTN3 gene function alters mouse muscle metabolism and shows evidence of positive selection in humans
Hook, Jeff W, Seto, Jane T, Gunning, Peter W, MacArthur, Daniel G, Quinlan, Kate G, Huttley, Gavin A, Lemckert, Frances A, Hardeman, Edna C, Edwards, Michael R, Berman, Yemima, Easteal, Simon, Kee, Anthony J, North, Kathryn N, Yang, Nan, Raftery, Joanna M
Published in Nature genetics (01.10.2007)
Published in Nature genetics (01.10.2007)
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Journal Article
Did aculeate silk evolve as an antifouling material?
Sutherland, Tara D, Sriskantha, Alagacone, Rapson, Trevor D, Kaehler, Benjamin D, Huttley, Gavin A
Published in PloS one (21.09.2018)
Published in PloS one (21.09.2018)
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Journal Article
Standard Codon Substitution Models Overestimate Purifying Selection for Nonstationary Data
Kaehler, Benjamin D., Yap, Von Bing, Huttley, Gavin A.
Published in Genome biology and evolution (01.01.2017)
Published in Genome biology and evolution (01.01.2017)
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Journal Article