A computed tomography vertebral segmentation dataset with anatomical variations and multi-vendor scanner data
Liebl, Hans, Schinz, David, Sekuboyina, Anjany, Malagutti, Luca, Löffler, Maximilian T., Bayat, Amirhossein, El Husseini, Malek, Tetteh, Giles, Grau, Katharina, Niederreiter, Eva, Baum, Thomas, Wiestler, Benedikt, Menze, Bjoern, Braren, Rickmer, Zimmer, Claus, Kirschke, Jan S.
Published in Scientific data (28.10.2021)
Published in Scientific data (28.10.2021)
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Journal Article
Texture Analysis Using CT and Chemical Shift Encoding-Based Water-Fat MRI Can Improve Differentiation Between Patients With and Without Osteoporotic Vertebral Fractures
Sollmann, Nico, Becherucci, Edoardo A, Boehm, Christof, Husseini, Malek El, Ruschke, Stefan, Burian, Egon, Kirschke, Jan S, Link, Thomas M, Subburaj, Karupppasamy, Karampinos, Dimitrios C, Krug, Roland, Baum, Thomas, Dieckmeyer, Michael
Published in Frontiers in endocrinology (Lausanne) (04.01.2022)
Published in Frontiers in endocrinology (Lausanne) (04.01.2022)
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Journal Article
Implementation of GAN-Based, Synthetic T2-Weighted Fat Saturated Images in the Routine Radiological Workflow Improves Spinal Pathology Detection
Schlaeger, Sarah, Drummer, Katharina, Husseini, Malek El, Kofler, Florian, Sollmann, Nico, Schramm, Severin, Zimmer, Claus, Kirschke, Jan S, Wiestler, Benedikt
Published in Diagnostics (Basel) (01.03.2023)
Published in Diagnostics (Basel) (01.03.2023)
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Journal Article
Automatic opportunistic osteoporosis screening in routine CT: improved prediction of patients with prevalent vertebral fractures compared to DXA
Löffler, Maximilian T., Jacob, Alina, Scharr, Andreas, Sollmann, Nico, Burian, Egon, El Husseini, Malek, Sekuboyina, Anjany, Tetteh, Giles, Zimmer, Claus, Gempt, Jens, Baum, Thomas, Kirschke, Jan S.
Published in European radiology (01.08.2021)
Published in European radiology (01.08.2021)
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Journal Article
Automated detection of the contrast phase in MDCT by an artificial neural network improves the accuracy of opportunistic bone mineral density measurements
Rühling, Sebastian, Navarro, Fernando, Sekuboyina, Anjany, El Husseini, Malek, Baum, Thomas, Menze, Bjoern, Braren, Rickmer, Zimmer, Claus, Kirschke, Jan S.
Published in European radiology (01.03.2022)
Published in European radiology (01.03.2022)
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Journal Article
Prognostic value of spinal cord lesion measures in early relapsing-remitting multiple sclerosis
Lauerer, Markus, McGinnis, Julian, Bussas, Matthias, El Husseini, Malek, Pongratz, Viola, Engl, Christina, Wuschek, Alexander, Berthele, Achim, Riederer, Isabelle, Kirschke, Jan S, Zimmer, Claus, Hemmer, Bernhard, Mühlau, Mark
Published in Journal of neurology, neurosurgery and psychiatry (01.01.2024)
Published in Journal of neurology, neurosurgery and psychiatry (01.01.2024)
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Journal Article
Automated Opportunistic Osteoporosis Screening in Routine Computed Tomography of the Spine: Comparison With Dedicated Quantitative CT
Sollmann, Nico, Löffler, Maximilian T., El Husseini, Malek, Sekuboyina, Anjany, Dieckmeyer, Michael, Rühling, Sebastian, Zimmer, Claus, Menze, Bjoern, Joseph, Gabby B., Baum, Thomas, Kirschke, Jan S.
Published in Journal of bone and mineral research (01.07.2022)
Published in Journal of bone and mineral research (01.07.2022)
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Journal Article
A Vertebral Segmentation Dataset with Fracture Grading
Löffler, Maximilian T, Sekuboyina, Anjany, Jacob, Alina, Grau, Anna-Lena, Scharr, Andreas, El Husseini, Malek, Kallweit, Mareike, Zimmer, Claus, Baum, Thomas, Kirschke, Jan S
Published in Radiology. Artificial intelligence (01.07.2020)
Published in Radiology. Artificial intelligence (01.07.2020)
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Journal Article
Proposed diagnostic volumetric bone mineral density thresholds for osteoporosis and osteopenia at the cervicothoracic spine in correlation to the lumbar spine
Rühling, Sebastian, Scharr, Andreas, Sollmann, Nico, Wostrack, Maria, Löffler, Maximilian T., Menze, Bjoern, Sekuboyina, Anjany, El Husseini, Malek, Braren, Rickmer, Zimmer, Claus, Kirschke, Jan S.
Published in European radiology (01.09.2022)
Published in European radiology (01.09.2022)
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Journal Article
Level-Specific Volumetric BMD Threshold Values for the Prediction of Incident Vertebral Fractures Using Opportunistic QCT: A Case-Control Study
Dieckmeyer, Michael, Löffler, Maximilian Thomas, El Husseini, Malek, Sekuboyina, Anjany, Menze, Bjoern, Sollmann, Nico, Wostrack, Maria, Zimmer, Claus, Baum, Thomas, Kirschke, Jan Stefan
Published in Frontiers in endocrinology (Lausanne) (20.05.2022)
Published in Frontiers in endocrinology (Lausanne) (20.05.2022)
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Journal Article
Gender-, Age- and Region-Specific Characterization of Vertebral Bone Microstructure Through Automated Segmentation and 3D Texture Analysis of Routine Abdominal CT
Dieckmeyer, Michael, Sollmann, Nico, El Husseini, Malek, Sekuboyina, Anjany, Löffler, Maximilian T, Zimmer, Claus, Kirschke, Jan S, Subburaj, Karupppasamy, Baum, Thomas
Published in Frontiers in endocrinology (Lausanne) (27.01.2022)
Published in Frontiers in endocrinology (Lausanne) (27.01.2022)
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Journal Article
Multiple sclerosis lesions and atrophy in the spinal cord: Distribution across vertebral levels and correlation with disability
Bussas, Matthias, El Husseini, Malek, Harabacz, Laura, Pineker, Viktor, Grahl, Sophia, Pongratz, Viola, Berthele, Achim, Riederer, Isabelle, Zimmer, Claus, Hemmer, Bernhard, Kirschke, Jan S., Mühlau, Mark
Published in NeuroImage clinical (01.01.2022)
Published in NeuroImage clinical (01.01.2022)
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Journal Article
Incidental vertebral fracture prediction using neuronal network-based automatic spine segmentation and volumetric bone mineral density extraction from routine clinical CT scans
Bodden, Jannis, Dieckmeyer, Michael, Sollmann, Nico, Burian, Egon, Rühling, Sebastian, Löffler, Maximilian T, Sekuboyina, Anjany, El Husseini, Malek, Zimmer, Claus, Kirschke, Jan S, Baum, Thomas
Published in Frontiers in endocrinology (Lausanne) (17.07.2023)
Published in Frontiers in endocrinology (Lausanne) (17.07.2023)
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Journal Article
Musculoskeletal spine modeling in large patient cohorts: how morphological individualization affects lumbar load estimation
Lerchl, Tanja, Nispel, Kati, Bodden, Jannis, Sekuboyina, Anjany, El Husseini, Malek, Fritzsche, Christian, Senner, Veit, Kirschke, Jan S
Published in Frontiers in bioengineering and biotechnology (12.06.2024)
Published in Frontiers in bioengineering and biotechnology (12.06.2024)
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Journal Article
Robust, Primitive, and Unsupervised Quality Estimation for Segmentation Ensembles
Kofler, Florian, Ezhov, Ivan, Fidon, Lucas, Pirkl, Carolin M, Paetzold, Johannes C, Burian, Egon, Pati, Sarthak, El Husseini, Malek, Navarro, Fernando, Shit, Suprosanna, Kirschke, Jan, Bakas, Spyridon, Zimmer, Claus, Wiestler, Benedikt, Menze, Bjoern H
Published in Frontiers in neuroscience (30.12.2021)
Published in Frontiers in neuroscience (30.12.2021)
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Journal Article
Lesion location across diagnostic regions in multiple sclerosis
Pongratz, Viola, Bussas, Matthias, Schmidt, Paul, Grahl, Sophia, Gasperi, Christiane, El Husseini, Malek, Harabacz, Laura, Pineker, Viktor, Sepp, Dominik, Grundl, Lioba, Wiestler, Benedikt, Kirschke, Jan, Zimmer, Claus, Berthele, Achim, Hemmer, Bernhard, Mühlau, Mark
Published in NeuroImage clinical (01.01.2023)
Published in NeuroImage clinical (01.01.2023)
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Journal Article
Sex differences and age-related changes in vertebral body volume and volumetric bone mineral density at the thoracolumbar spine using opportunistic QCT
Rühling, Sebastian, Dittmann, Jonas, Müller, Tobias, Husseini, Malek El, Bodden, Jannis, Hernandez Petzsche, Moritz R, Löffler, Maximilian T, Sollmann, Nico, Baum, Thomas, Seifert-Klauss, Vanadin, Wostrack, Maria, Zimmer, Claus, Kirschke, Jan S
Published in Frontiers in endocrinology (Lausanne) (15.02.2024)
Published in Frontiers in endocrinology (Lausanne) (15.02.2024)
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Journal Article
Reproducibility of CT-based opportunistic vertebral volumetric bone mineral density measurements from an automated segmentation framework
Bodden, Jannis, Prucker, Philipp, Sekuboyina, Anjany, El Husseini, Malek, Grau, Katharina, Rühling, Sebastian, Burian, Egon, Zimmer, Claus, Baum, Thomas, Kirschke, Jan S.
Published in European radiology experimental (01.08.2024)
Published in European radiology experimental (01.08.2024)
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Journal Article
Validation of a Patient-Specific Musculoskeletal Model for Lumbar Load Estimation Generated by an Automated Pipeline From Whole Body CT
Lerchl, Tanja, El Husseini, Malek, Bayat, Amirhossein, Sekuboyina, Anjany, Hermann, Luis, Nispel, Kati, Baum, Thomas, Löffler, Maximilian T., Senner, Veit, Kirschke, Jan S.
Published in Frontiers in bioengineering and biotechnology (11.07.2022)
Published in Frontiers in bioengineering and biotechnology (11.07.2022)
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Journal Article
Vertebral Labelling in Radiographs: Learning a Coordinate Corrector to Enforce Spinal Shape
Bayat, Amirhossein, Sekuboyina, Anjany, Hofmann, Felix, Husseini, Malek El, Kirschke, Jan S., Menze, Bjoern H.
Published in Computational Methods and Clinical Applications for Spine Imaging (2020)
Published in Computational Methods and Clinical Applications for Spine Imaging (2020)
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