Coagulopathy and Thrombosis as a Result of Severe COVID-19 Infection: A Microvascular Focus
Katneni, Upendra K., Alexaki, Aikaterini, Hunt, Ryan C., Schiller, Tal, DiCuccio, Michael, Buehler, Paul W., Ibla, Juan C., Kimchi-Sarfaty, Chava
Published in Thrombosis and haemostasis (01.12.2020)
Published in Thrombosis and haemostasis (01.12.2020)
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Journal Article
Mouse embryo CoCoPUTs: novel murine transcriptomic-weighted usage website featuring multiple strains, tissues, and stages
Fumagalli, Sarah E, Smith, Sean, Ghazanchyan, Tigran, Meyer, Douglas, Paul, Rahul, Campbell, Collin, Santana-Quintero, Luis, Golikov, Anton, Ibla, Juan, Bar, Haim, Komar, Anton A, Hunt, Ryan C, Lin, Brian, DiCuccio, Michael, Kimchi-Sarfaty, Chava
Published in BMC bioinformatics (06.09.2024)
Published in BMC bioinformatics (06.09.2024)
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Journal Article
Distinct signatures of codon and codon pair usage in 32 primary tumor types in the novel database CancerCoCoPUTs for cancer-specific codon usage
Meyer, Douglas, Kames, Jacob, Bar, Haim, Komar, Anton A, Alexaki, Aikaterini, Ibla, Juan, Hunt, Ryan C, Santana-Quintero, Luis V, Golikov, Anton, DiCuccio, Michael, Kimchi-Sarfaty, Chava
Published in Genome medicine (28.07.2021)
Published in Genome medicine (28.07.2021)
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Journal Article
Exposing synonymous mutations
Hunt, Ryan C, Simhadri, Vijaya L, Iandoli, Matthew, Sauna, Zuben E, Kimchi-Sarfaty, Chava
Published in Trends in genetics (01.07.2014)
Published in Trends in genetics (01.07.2014)
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Journal Article
Ribosome profiling of HEK293T cells overexpressing codon optimized coagulation factor IX [version 2; peer review: 3 approved]
Alexaki, Aikaterini, Kames, Jacob, Hettiarachchi, Gaya K, Athey, John C, Katneni, Upendra K, Hunt, Ryan C, Hamasaki-Katagiri, Nobuko, Holcomb, David D, DiCuccio, Michael, Bar, Haim, Komar, Anton A, Kimchi-Sarfaty, Chava
Published in F1000 research (2020)
Published in F1000 research (2020)
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Journal Article
Characterization of conformation-sensitive antibodies to ADAMTS13, the von Willebrand cleavage protease
Sauna, Zuben E, Okunji, Chinyere, Hunt, Ryan C, Gupta, Tanvi, Allen, Courtni E, Plum, Elizabeth, Blaisdell, Adam, Grigoryan, Vahan, Geetha, S, Fathke, Robert, Soejima, Kenji, Kimchi-Sarfaty, Chava
Published in PloS one (05.08.2009)
Published in PloS one (05.08.2009)
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Journal Article
Depletion of haptoglobin and hemopexin promote hemoglobin-mediated lipoprotein oxidation in sickle cell disease
Yalamanoglu, Ayla, Deuel, Jeremy W, Hunt, Ryan C, Baek, Jin Hyen, Hassell, Kathryn, Redinius, Katie, Irwin, David C, Schaer, Dominik J, Buehler, Paul W
Published in American journal of physiology. Lung cellular and molecular physiology (01.11.2018)
Published in American journal of physiology. Lung cellular and molecular physiology (01.11.2018)
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Journal Article
Effects of codon optimization on coagulation factor IX translation and structure: Implications for protein and gene therapies
Alexaki, Aikaterini, Hettiarachchi, Gaya K., Athey, John C., Katneni, Upendra K., Simhadri, Vijaya, Hamasaki-Katagiri, Nobuko, Nanavaty, Puja, Lin, Brian, Takeda, Kazuyo, Freedberg, Darón, Monroe, Dougald, McGill, Joseph R., Peters, Robert, Kames, Jacob M., Holcomb, David D., Hunt, Ryan C., Sauna, Zuben E., Gelinas, Amy, Janjic, Nebojsa, DiCuccio, Michael, Bar, Haim, Komar, Anton A., Kimchi-Sarfaty, Chava
Published in Scientific reports (29.10.2019)
Published in Scientific reports (29.10.2019)
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Journal Article
In silico features of ADAMTS13 contributing to plasmatic ADAMTS13 levels in neonates with congenital heart disease
Katneni, Upendra K., Holcomb, David D., Hernandez, Nancy E., Hamasaki-Katagiri, Nobuko, Hunt, Ryan C., Bar, Haim, Ibla, Juan C., Kimchi-Sarfaty, Chava
Published in Thrombosis research (01.09.2020)
Published in Thrombosis research (01.09.2020)
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Journal Article
Translational and transcriptional responses in human primary hepatocytes under hypoxia
Hettiarachchi, Gaya K, Katneni, Upendra K, Hunt, Ryan C, Kames, Jacob M, Athey, John C, Bar, Haim, Sauna, Zuben E, McGill, Joseph R, Ibla, Juan C, Kimchi-Sarfaty, Chava
Published in American journal of physiology: Gastrointestinal and liver physiology (01.06.2019)
Published in American journal of physiology: Gastrointestinal and liver physiology (01.06.2019)
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Journal Article
Synonymous ADAMTS13 variants impact molecular characteristics and contribute to variability in active protein abundance
Jankowska, Katarzyna I, Meyer, Douglas, Holcomb, David Dillon, Kames, Jacob, Hamasaki-Katagiri, Nobuko, Katneni, Upendra K., Hunt, Ryan C., Ibla, Juan C., Kimchi-Sarfaty, Chava
Published in Blood advances (27.09.2022)
Published in Blood advances (27.09.2022)
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Journal Article
Structural, functional, and immunogenicity implications of F9 gene recoding
Katneni, Upendra K., Alexaki, Aikaterini, Hunt, Ryan C., Hamasaki-Katagiri, Nobuko, Hettiarachchi, Gaya K., Kames, Jacob M., McGill, Joseph R., Holcomb, David D., Athey, John C., Lin, Brian, Parunov, Leonid A., Kafri, Tal, Lu, Qi, Peters, Robert, Ovanesov, Mikhail V., Freedberg, Darón I., Bar, Haim, Komar, Anton A., Sauna, Zuben E., Kimchi-Sarfaty, Chava
Published in Blood advances (12.07.2022)
Published in Blood advances (12.07.2022)
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Journal Article
Cyclosporin A Impairs the Secretion and Activity of ADAMTS13 (A Disintegrin and Metalloprotease with Thrombospondin Type 1 Repeat)
Hershko, Klilah, Simhadri, Vijaya L., Blaisdell, Adam, Hunt, Ryan C., Newell, Jordan, Tseng, Sandra C., Hershko, Alon Y., Choi, Jae Won, Sauna, Zuben E., Wu, Andrew, Bram, Richard J., Komar, Anton A., Kimchi-Sarfaty, Chava
Published in The Journal of biological chemistry (28.12.2012)
Published in The Journal of biological chemistry (28.12.2012)
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Journal Article
Pseudovirions as Vehicles for the Delivery of siRNA
Lund, Paul E, Hunt, Ryan C, Gottesman, Michael M, Kimchi-Sarfaty, Chava
Published in Pharmaceutical research (01.03.2010)
Published in Pharmaceutical research (01.03.2010)
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Journal Article
Ribosome profiling of HEK293T cells overexpressing codon optimized coagulation factor IX [version 1; peer review: 3 approved with reservations]
Alexaki, Aikaterini, Kames, Jacob, Hettiarachchi, Gaya K, Athey, John C, Katneni, Upendra K, Hunt, Ryan C, Hamasaki-Katagiri, Nobuko, Holcomb, David D, DiCuccio, Michael, Bar, Haim, Komar, Anton A, Kimchi-Sarfaty, Chava
Published in F1000 research (2020)
Published in F1000 research (2020)
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Journal Article
Detection of a secreted metalloprotease within the nuclei of liver cells
Hunt, Ryan C, Geetha, S, Allen, Courtni E, Hershko, Klilah, Fathke, Robert, Kong, Philip L, Plum, Elizabeth, Struble, Evi Budo, Soejima, Kenji, Friedman, Scott, Garfield, Susan, Balaji, S, Kimchi-Sarfaty, Chava
Published in Molecular bioSystems (01.06.2011)
Published in Molecular bioSystems (01.06.2011)
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Journal Article
Detection of intracellular ADAMTS13, a secreted zinc-metalloprotease, via flow cytometry
Geetha, S, Allen, Courtni E, Hunt, Ryan C, Plum, Elizabeth, Garfield, Susan, Friedman, Scott L, Soejima, Kenji, Sauna, Zuben E, Kimchi-Sarfaty, Chava
Published in Cytometry. Part A (01.08.2009)
Published in Cytometry. Part A (01.08.2009)
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Journal Article