Extending the Compatibility of the SP3 Paramagnetic Bead Processing Approach for Proteomics
Moggridge, Sophie, Sorensen, Poul H, Morin, Gregg B, Hughes, Christopher S
Published in Journal of proteome research (06.04.2018)
Published in Journal of proteome research (06.04.2018)
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Journal Article
Ultrasensitive proteome analysis using paramagnetic bead technology
Hughes, Christopher S, Foehr, Sophia, Garfield, David A, Furlong, Eileen E, Steinmetz, Lars M, Krijgsveld, Jeroen
Published in Molecular systems biology (01.10.2014)
Published in Molecular systems biology (01.10.2014)
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Journal Article
Proteomic analysis of archival breast cancer clinical specimens identifies biological subtypes with distinct survival outcomes
Asleh, Karama, Negri, Gian Luca, Spencer Miko, Sandra E., Colborne, Shane, Hughes, Christopher S., Wang, Xiu Q., Gao, Dongxia, Gilks, C. Blake, Chia, Stephen K. L., Nielsen, Torsten O., Morin, Gregg B.
Published in Nature communications (16.02.2022)
Published in Nature communications (16.02.2022)
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Journal Article
CDK12 regulates alternative last exon mRNA splicing and promotes breast cancer cell invasion
Tien, Jerry F, Mazloomian, Alborz, Cheng, S-W Grace, Hughes, Christopher S, Chow, Christalle C T, Canapi, Leanna T, Oloumi, Arusha, Trigo-Gonzalez, Genny, Bashashati, Ali, Xu, James, Chang, Vicky C-D, Shah, Sohrab P, Aparicio, Samuel, Morin, Gregg B
Published in Nucleic acids research (20.06.2017)
Published in Nucleic acids research (20.06.2017)
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Journal Article
ASPSCR1-TFE3 reprograms transcription by organizing enhancer loops around hexameric VCP/p97
Pozner, Amir, Li, Li, Verma, Shiv Prakash, Wang, Shuxin, Barrott, Jared J., Nelson, Mary L., Yu, Jamie S. E., Negri, Gian Luca, Colborne, Shane, Hughes, Christopher S., Zhu, Ju-Fen, Lambert, Sydney L., Carroll, Lara S., Smith-Fry, Kyllie, Stewart, Michael G., Kannan, Sarmishta, Jensen, Bodrie, John, Cini M., Sikdar, Saif, Liu, Hongrui, Dang, Ngoc Ha, Bourdage, Jennifer, Li, Jinxiu, Vahrenkamp, Jeffery M., Mortenson, Katelyn L., Groundland, John S., Wustrack, Rosanna, Senger, Donna L., Zemp, Franz J., Mahoney, Douglas J., Gertz, Jason, Zhang, Xiaoyang, Lazar, Alexander J., Hirst, Martin, Morin, Gregg B., Nielsen, Torsten O., Shen, Peter S., Jones, Kevin B.
Published in Nature communications (07.02.2024)
Published in Nature communications (07.02.2024)
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Journal Article
CLK-dependent exon recognition and conjoined gene formation revealed with a novel small molecule inhibitor
Funnell, Tyler, Tasaki, Shinya, Oloumi, Arusha, Araki, Shinsuke, Kong, Esther, Yap, Damian, Nakayama, Yusuke, Hughes, Christopher S., Cheng, S.-W. Grace, Tozaki, Hirokazu, Iwatani, Misa, Sasaki, Satoshi, Ohashi, Tomohiro, Miyazaki, Tohru, Morishita, Nao, Morishita, Daisuke, Ogasawara-Shimizu, Mari, Ohori, Momoko, Nakao, Shoichi, Karashima, Masatoshi, Sano, Masaya, Murai, Aiko, Nomura, Toshiyuki, Uchiyama, Noriko, Kawamoto, Tomohiro, Hara, Ryujiro, Nakanishi, Osamu, Shumansky, Karey, Rosner, Jamie, Wan, Adrian, McKinney, Steven, Morin, Gregg B., Nakanishi, Atsushi, Shah, Sohrab, Toyoshiba, Hiroyoshi, Aparicio, Samuel
Published in Nature communications (23.02.2017)
Published in Nature communications (23.02.2017)
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Journal Article
Evaluating the Characteristics of Reporter Ion Signal Acquired in the Orbitrap Analyzer for Isobaric Mass Tag Proteome Quantification Experiments
Hughes, Christopher S, Zhu, Chenchen, Spicer, Victor, Krokhin, Oleg V, Morin, Gregg B
Published in Journal of proteome research (05.05.2017)
Published in Journal of proteome research (05.05.2017)
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Journal Article
Single-pot, solid-phase-enhanced sample preparation for proteomics experiments
Hughes, Christopher S., Moggridge, Sophie, Müller, Torsten, Sorensen, Poul H., Morin, Gregg B., Krijgsveld, Jeroen
Published in Nature protocols (01.01.2019)
Published in Nature protocols (01.01.2019)
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Journal Article
Proteomic analysis of transitional cell carcinoma–like variant of tubo-ovarian high-grade serous carcinoma
Tessier-Cloutier, Basile, Cochrane, Dawn R., Karnezis, Anthony N., Colborne, Shane, Magrill, Jamie, Talhouk, Aline, Zhang, Jonathan, Leung, Samuel, Hughes, Christopher S., Piskorz, Anna, Cheng, Angela S., Greening, Kendall, du Bois, Andreas, Pfisterer, Jacobus, Soslow, Robert A., Kommoss, Stefan, Brenton, James D., Morin, Gregg B., Gilks, C. Blake, Huntsman, David G., Kommoss, Friedrich
Published in Human pathology (01.07.2020)
Published in Human pathology (01.07.2020)
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Journal Article
High-Throughput Cytochrome P450 Inhibition Assays Using Laser Diode Thermal Desorption-Atmospheric Pressure Chemical Ionization-Tandem Mass Spectrometry
Wu, Jin, Hughes, Christopher S, Picard, Pierre, Letarte, Sylvain, Gaudreault, Mireille, Lévesque, Jean-François, Nicoll-Griffith, Deborah A, Bateman, Kevin P
Published in Analytical chemistry (Washington) (15.06.2007)
Published in Analytical chemistry (Washington) (15.06.2007)
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Journal Article
Quantitative Profiling of Single Formalin Fixed Tumour Sections: proteomics for translational research
Hughes, Christopher S., McConechy, Melissa K., Cochrane, Dawn R., Nazeran, Tayyebeh, Karnezis, Anthony N., Huntsman, David G., Morin, Gregg B.
Published in Scientific reports (07.10.2016)
Published in Scientific reports (07.10.2016)
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Journal Article
Class I HDAC inhibitors enhance YB‐1 acetylation and oxidative stress to block sarcoma metastasis
El‐Naggar, Amal M, Somasekharan, Syam Prakash, Wang, Yemin, Cheng, Hongwei, Negri, Gian Luca, Pan, Melvin, Wang, Xue Qi, Delaidelli, Alberto, Rafn, Bo, Cran, Jordan, Zhang, Fan, Zhang, Haifeng, Colborne, Shane, Gleave, Martin, Mandinova, Anna, Kedersha, Nancy, Hughes, Christopher S, Surdez, Didier, Delattre, Olivier, Wang, Yuzhuo, Huntsman, David G, Morin, Gregg B, Sorensen, Poul H
Published in EMBO reports (05.12.2019)
Published in EMBO reports (05.12.2019)
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Journal Article
Proteomic Screens for Suppressors of Anoikis Identify IL1RAP as a Promising Surface Target in Ewing Sarcoma
Zhang, Hai-Feng, Hughes, Christopher S, Li, Wei, He, Jian-Zhong, Surdez, Didier, El-Naggar, Amal M, Cheng, Hongwei, Prudova, Anna, Delaidelli, Alberto, Negri, Gian Luca, Li, Xiaojun, Ørum-Madsen, Maj Sofie, Lizardo, Michael M, Oo, Htoo Zarni, Colborne, Shane, Shyp, Taras, Scopim-Ribeiro, Renata, Hammond, Colin A, Dhez, Anne-Chloe, Langman, Sofya, Lim, Jonathan K M, Kung, Sonia H Y, Li, Amy, Steino, Anne, Daugaard, Mads, Parker, Seth J, Geltink, Ramon I Klein, Orentas, Rimas J, Xu, Li-Yan, Morin, Gregg B, Delattre, Olivier, Dimitrov, Dimiter S, Sorensen, Poul H
Published in Cancer discovery (01.11.2021)
Published in Cancer discovery (01.11.2021)
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Journal Article
The FUS-DDIT3 Interactome in Myxoid Liposarcoma
Yu, Jamie S.E., Colborne, Shane, Hughes, Christopher S., Morin, Gregg B., Nielsen, Torsten O.
Published in Neoplasia (New York, N.Y.) (01.08.2019)
Published in Neoplasia (New York, N.Y.) (01.08.2019)
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Journal Article
Surface and Global Proteome Analyses Identify ENPP1 and Other Surface Proteins as Actionable Immunotherapeutic Targets in Ewing Sarcoma
Mooney, Brian, Negri, Gian Luca, Shyp, Taras, Delaidelli, Alberto, Zhang, Hai-Feng, Spencer Miko, Sandra E, Weiner, Amber K, Radaoui, Alexander B, Shraim, Rawan, Lizardo, Michael M, Hughes, Christopher S, Li, Amy, El-Naggar, Amal M, Rouleau, Melanie, Li, Wei, Dimitrov, Dimiter S, Kurmasheva, Raushan T, Houghton, Peter J, Diskin, Sharon J, Maris, John M, Morin, Gregg B, Sorensen, Poul H
Published in Clinical cancer research (01.03.2024)
Published in Clinical cancer research (01.03.2024)
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Journal Article
HACE1 blocks HIF1α accumulation under hypoxia in a RAC1 dependent manner
Turgu, Busra, Zhang, Fan, El-Naggar, Amal, Negri, Gian Luca, Kogler, Melanie, Tortola, Luigi, Johnson, Fraser, Ng, Tony, Li, Amy, Yapp, Donald, Lockwood, William, Martinez, Daniel, Maris, John M., Daugaard, Mads, Penninger, Josef M., Hughes, Christopher S., Sorensen, Poul H.
Published in Oncogene (18.03.2021)
Published in Oncogene (18.03.2021)
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Journal Article
Not4 and Not5 modulate translation elongation by Rps7A ubiquitination, Rli1 moonlighting, and condensates that exclude eIF5A
Allen, George E., Panasenko, Olesya O., Villanyi, Zoltan, Zagatti, Marina, Weiss, Benjamin, Pagliazzo, Lucile, Huch, Susanne, Polte, Christine, Zahoran, Szabolcs, Hughes, Christopher S., Pelechano, Vicent, Ignatova, Zoya, Collart, Martine A.
Published in Cell reports (Cambridge) (31.08.2021)
Published in Cell reports (Cambridge) (31.08.2021)
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