EBV MicroRNA BART16 Suppresses Type I IFN Signaling
Hooykaas, Marjolein J G, van Gent, Michiel, Soppe, Jasper A, Kruse, Elisabeth, Boer, Ingrid G J, van Leenen, Dik, Groot Koerkamp, Marian J A, Holstege, Frank C P, Ressing, Maaike E, Wiertz, Emmanuel J H J, Lebbink, Robert Jan
Published in The Journal of immunology (1950) (15.05.2017)
Published in The Journal of immunology (1950) (15.05.2017)
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The genomic landscape of compensatory evolution
Szamecz, Béla, Boross, Gábor, Kalapis, Dorottya, Kovács, Károly, Fekete, Gergely, Farkas, Zoltán, Lázár, Viktória, Hrtyan, Mónika, Kemmeren, Patrick, Groot Koerkamp, Marian J A, Rutkai, Edit, Holstege, Frank C P, Papp, Balázs, Pál, Csaba
Published in PLoS biology (01.08.2014)
Published in PLoS biology (01.08.2014)
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Two distinct repressive mechanisms for histone 3 lysine 4 methylation through promoting 3'-end antisense transcription
Margaritis, Thanasis, Oreal, Vincent, Brabers, Nathalie, Maestroni, Laetitia, Vitaliano-Prunier, Adeline, Benschop, Joris J, van Hooff, Sander, van Leenen, Dik, Dargemont, Catherine, Géli, Vincent, Holstege, Frank C P
Published in PLoS genetics (01.09.2012)
Published in PLoS genetics (01.09.2012)
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Single-cell transcriptomics reveals immune suppression and cell states predictive of patient outcomes in rhabdomyosarcoma
DeMartino, Jeff, Meister, Michael T., Visser, Lindy L., Brok, Mariël, Groot Koerkamp, Marian J. A., Wezenaar, Amber K. L., Hiemcke-Jiwa, Laura S., de Souza, Terezinha, Merks, Johannes H. M., Rios, Anne C., Holstege, Frank C. P., Margaritis, Thanasis, Drost, Jarno
Published in Nature communications (27.05.2023)
Published in Nature communications (27.05.2023)
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Toward a Comprehensive Atlas of the Physical Interactome of Saccharomyces cerevisiae
Collins, Sean R., Kemmeren, Patrick, Zhao, Xue-Chu, Greenblatt, Jack F., Spencer, Forrest, Holstege, Frank C.P., Weissman, Jonathan S., Krogan, Nevan J.
Published in Molecular & cellular proteomics (01.03.2007)
Published in Molecular & cellular proteomics (01.03.2007)
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Recruitment of TREX to the transcription machinery by its direct binding to the phospho-CTD of RNA polymerase II
Meinel, Dominik M, Burkert-Kautzsch, Cornelia, Kieser, Anja, O'Duibhir, Eoghan, Siebert, Matthias, Mayer, Andreas, Cramer, Patrick, Söding, Johannes, Holstege, Frank C P, Sträßer, Katja
Published in PLoS genetics (01.11.2013)
Published in PLoS genetics (01.11.2013)
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The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction pattern
Amini, Saman, Jacobsen, Annika, Ivanova, Olga, Lijnzaad, Philip, Heringa, Jaap, Holstege, Frank C P, Feenstra, K Anton, Kemmeren, Patrick
Published in PLoS computational biology (01.05.2019)
Published in PLoS computational biology (01.05.2019)
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Cell cycle population effects in perturbation studies
O'Duibhir, Eoghan, Lijnzaad, Philip, Benschop, Joris J, Lenstra, Tineke L, van Leenen, Dik, Groot Koerkamp, Marian JA, Margaritis, Thanasis, Brok, Mariel O, Kemmeren, Patrick, Holstege, Frank CP
Published in Molecular systems biology (01.06.2014)
Published in Molecular systems biology (01.06.2014)
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Single‐cell RNA sequencing of pediatric Hodgkin lymphoma to study the inhibition of T cell subtypes
Kanter, Jurrian K., Steemers, Alexander S., Gonzalez, Daniel Montiel, Ineveld, Ravian L., Blijleven, Catharina, Groenen, Niels, Trabut, Laurianne, Scheijde‐Vermeulen, Marijn A., Westera, Liset, Beishuizen, Auke, Rios, Anne C., Holstege, Frank C. P., Brandsma, Arianne M., Margaritis, Thanasis, Boxtel, Ruben, Meyer‐Wentrup, Friederike
Published in HemaSphere (01.09.2024)
Published in HemaSphere (01.09.2024)
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Lmx1a encodes a rostral set of mesodiencephalic dopaminergic neurons marked by the Wnt/B-catenin signaling activator R-spondin 2
Hoekstra, Elisa J, von Oerthel, Lars, van der Heide, Lars P, Kouwenhoven, Willemieke M, Veenvliet, Jesse V, Wever, Iris, Jin, Yong-Ri, Yoon, Jeong K, van der Linden, Annemarie J A, Holstege, Frank C P, Groot Koerkamp, Marian J, Smidt, Marten P
Published in PloS one (16.09.2013)
Published in PloS one (16.09.2013)
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The role of Ctk1 kinase in termination of small non-coding RNAs
Lenstra, Tineke L, Tudek, Agnieszka, Clauder, Sandra, Xu, Zhenyu, Pachis, Spyridon T, van Leenen, Dik, Kemmeren, Patrick, Steinmetz, Lars M, Libri, Domenico, Holstege, Frank C P
Published in PloS one (04.12.2013)
Published in PloS one (04.12.2013)
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Expression Profiling after Prolonged Experimental Febrile Seizures in Mice Suggests Structural Remodeling in the Hippocampus
Jongbloets, Bart C, van Gassen, Koen L I, Kan, Anne A, Olde Engberink, Anneke H O, de Wit, Marina, Wolterink-Donselaar, Inge G, Groot Koerkamp, Marian J A, van Nieuwenhuizen, Onno, Holstege, Frank C P, de Graan, Pierre N E
Published in PloS one (18.12.2015)
Published in PloS one (18.12.2015)
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Centromere binding and a conserved role in chromosome stability for SUMO-dependent ubiquitin ligases
van de Pasch, Loes A L, Miles, Antony J, Nijenhuis, Wilco, Brabers, Nathalie A C H, van Leenen, Dik, Lijnzaad, Philip, Brown, Markus K, Ouellet, Jimmy, Barral, Yves, Kops, Geert J P L, Holstege, Frank C P
Published in PloS one (13.06.2013)
Published in PloS one (13.06.2013)
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Aberrant gene expression in dogs with portosystemic shunts
van Steenbeek, Frank G, Van den Bossche, Lindsay, Grinwis, Guy C M, Kummeling, Anne, van Gils, Ingrid H M, Koerkamp, Marian J A Groot, van Leenen, Dik, Holstege, Frank C P, Penning, Louis C, Rothuizen, Jan, Leegwater, Peter A J, Spee, Bart
Published in PloS one (25.02.2013)
Published in PloS one (25.02.2013)
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A high resolution protein interaction map of the yeast Mediator complex
Guglielmi, Benjamin, van Berkum, Nynke L., Klapholz, Benjamin, Bijma, Theo, Boube, Muriel, Boschiero, Claire, Bourbon, Henri-Marc, Holstege, Frank C. P., Werner, Michel
Published in Nucleic acids research (01.01.2004)
Published in Nucleic acids research (01.01.2004)
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Tight control of MEK-ERK activation is essential in regulating proliferation, survival, and cytokine production of CD34+-derived neutrophil progenitors
Geest, Christian R., Buitenhuis, Miranda, Groot Koerkamp, Marian J.A., Holstege, Frank C.P., Vellenga, Edo, Coffer, Paul J.
Published in Blood (15.10.2009)
Published in Blood (15.10.2009)
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A systematic analysis of genetic interactions and their underlying biology in childhood cancer
Daub, Josephine T., Amini, Saman, Kersjes, Denise J. E., Ma, Xiaotu, Jäger, Natalie, Zhang, Jinghui, Pfister, Stefan M., Holstege, Frank C. P., Kemmeren, Patrick
Published in Communications biology (06.10.2021)
Published in Communications biology (06.10.2021)
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Uterine Selection of Human Embryos at Implantation
Brosens, Jan J., Salker, Madhuri S., Teklenburg, Gijs, Nautiyal, Jaya, Salter, Scarlett, Lucas, Emma S., Steel, Jennifer H., Christian, Mark, Chan, Yi-Wah, Boomsma, Carolien M., Moore, Jonathan D., Hartshorne, Geraldine M., Šućurović, Sandra, Mulac-Jericevic, Biserka, Heijnen, Cobi J., Quenby, Siobhan, Groot Koerkamp, Marian J., Holstege, Frank C. P., Shmygol, Anatoly, Macklon, Nick S.
Published in Scientific reports (06.02.2014)
Published in Scientific reports (06.02.2014)
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