Single-cell expression profiling reveals dynamic flux of cardiac stromal, vascular and immune cells in health and injury
Farbehi, Nona, Patrick, Ralph, Dorison, Aude, Xaymardan, Munira, Janbandhu, Vaibhao, Wystub-Lis, Katharina, Ho, Joshua Wk, Nordon, Robert E, Harvey, Richard P
Published in eLife (26.03.2019)
Published in eLife (26.03.2019)
Get full text
Journal Article
An innovative approach for testing bioinformatics programs using metamorphic testing
Chen, Tsong Yueh, Ho, Joshua W K, Liu, Huai, Xie, Xiaoyuan
Published in BMC bioinformatics (19.01.2009)
Published in BMC bioinformatics (19.01.2009)
Get full text
Journal Article
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis
Ho, Joshua W K, Bishop, Eric, Karchenko, Peter V, Nègre, Nicolas, White, Kevin P, Park, Peter J
Published in BMC genomics (28.02.2011)
Published in BMC genomics (28.02.2011)
Get full text
Journal Article
Effect of machine learning re-sampling techniques for imbalanced datasets in 18F-FDG PET-based radiomics model on prognostication performance in cohorts of head and neck cancer patients
Xie, Chenyi, Du, Richard, Ho, Joshua WK, Pang, Herbert H, Chiu, Keith WH, Lee, Elaine YP, Vardhanabhuti, Varut
Published in European journal of nuclear medicine and molecular imaging (01.11.2020)
Published in European journal of nuclear medicine and molecular imaging (01.11.2020)
Get full text
Journal Article
Gene-gene interaction filtering with ensemble of filters
Yang, Pengyi, Ho, Joshua Wk, Yang, Yee Hwa, Zhou, Bing B
Published in BMC bioinformatics (15.02.2011)
Published in BMC bioinformatics (15.02.2011)
Get full text
Journal Article
A genetic ensemble approach for gene-gene interaction identification
Yang, Pengyi, Ho, Joshua W K, Zomaya, Albert Y, Zhou, Bing B
Published in BMC bioinformatics (21.10.2010)
Published in BMC bioinformatics (21.10.2010)
Get full text
Journal Article
Binding of transcription factor GabR to DNA requires recognition of DNA shape at a location distinct from its cognate binding site
Al-Zyoud, Walid A, Hynson, Robert M G, Ganuelas, Lorraine A, Coster, Adelle C F, Duff, Anthony P, Baker, Matthew A B, Stewart, Alastair G, Giannoulatou, Eleni, Ho, Joshua W K, Gaus, Katharina, Liu, Dali, Lee, Lawrence K, Böcking, Till
Published in Nucleic acids research (18.02.2016)
Published in Nucleic acids research (18.02.2016)
Get full text
Journal Article
Testing and validating machine learning classifiers by metamorphic testing
Xie, Xiaoyuan, Ho, Joshua W.K., Murphy, Christian, Kaiser, Gail, Xu, Baowen, Chen, Tsong Yueh
Published in The Journal of systems and software (01.04.2011)
Published in The Journal of systems and software (01.04.2011)
Get full text
Journal Article
Lineage tracing and single-cell analysis reveal proliferative Prom1+ tumour-propagating cells and their dynamic cellular transition during liver cancer progression
Zhou, Lei, Yu, Ken HO, Wong, Tin Lok, Zhang, Zhao, Chan, Chun Ho, Loong, Jane HC, Che, Noelia, Yu, Hua Jian, Tan, Kel Vin, Tong, Man, Ngan, Elly S, Ho, Joshua WK, Ma, Stephanie
Published in Gut (01.08.2022)
Published in Gut (01.08.2022)
Get full text
Journal Article
NAD Deficiency, Congenital Malformations, and Niacin Supplementation
Shi, Hongjun, Enriquez, Annabelle, Rapadas, Melissa, Martin, Ella M.M.A, Wang, Roni, Moreau, Julie, Lim, Chai K, Szot, Justin O, Ip, Eddie, Hughes, James N, Sugimoto, Kotaro, Humphreys, David T, McInerney-Leo, Aideen M, Leo, Paul J, Maghzal, Ghassan J, Halliday, Jake, Smith, Janine, Colley, Alison, Mark, Paul R, Collins, Felicity, Sillence, David O, Winlaw, David S, Ho, Joshua W.K, Guillemin, Gilles J, Brown, Matthew A, Kikuchi, Kazu, Thomas, Paul Q, Stocker, Roland, Giannoulatou, Eleni, Chapman, Gavin, Duncan, Emma L, Sparrow, Duncan B, Dunwoodie, Sally L
Published in The New England journal of medicine (10.08.2017)
Published in The New England journal of medicine (10.08.2017)
Get full text
Journal Article
PD-L1 regulates inflammatory programs of macrophages from human pluripotent stem cells
Cao, Handi, Xiang, Yang, Zhang, Shihui, Chao, Yiming, Guo, Jilong, Aurich, Theo, Ho, Joshua Wk, Huang, Yuanhua, Liu, Pentao, Sugimura, Ryohichi
Published in Life science alliance (01.02.2024)
Published in Life science alliance (01.02.2024)
Get full text
Journal Article
A Screening Approach to Identify Clinically Actionable Variants Causing Congenital Heart Disease in Exome Data
Szot, Justin O, Cuny, Hartmut, Blue, Gillian M, Humphreys, David T, Ip, Eddie, Harrison, Katrina, Sholler, Gary F, Giannoulatou, Eleni, Leo, Paul, Duncan, Emma L, Sparrow, Duncan B, Ho, Joshua W K, Graham, Robert M, Pachter, Nicholas, Chapman, Gavin, Winlaw, David S, Dunwoodie, Sally L
Published in Circulation. Cardiovascular genetics (01.03.2018)
Published in Circulation. Cardiovascular genetics (01.03.2018)
Get full text
Journal Article
Targeted Next-Generation Sequencing Identifies Pathogenic Variants in Familial Congenital Heart Disease
Blue, Gillian M., MSc, Kirk, Edwin P., MBBS, PhD, Giannoulatou, Eleni, MEng, MPhil, DPhil, Dunwoodie, Sally L., PhD, Ho, Joshua W.K., PhD, Hilton, Desiree C.K., PhD, White, Susan M., MBBS, Sholler, Gary F., MBBS (Hons), Harvey, Richard P., PhD, Winlaw, David S., MBBS, MD
Published in Journal of the American College of Cardiology (16.12.2014)
Published in Journal of the American College of Cardiology (16.12.2014)
Get full text
Journal Article
Impact of sequencing depth in ChIP-seq experiments
Jung, Youngsook L., Luquette, Lovelace J., Ho, Joshua W.K., Ferrari, Francesco, Tolstorukov, Michael, Minoda, Aki, Issner, Robbyn, Epstein, Charles B., Karpen, Gary H., Kuroda, Mitzi I., Park, Peter J.
Published in Nucleic acids research (01.05.2014)
Published in Nucleic acids research (01.05.2014)
Get full text
Journal Article
Lung Stem Cell Self-Renewal Relies on BMI1-Dependent Control of Expression at Imprinted Loci
Zacharek, Sima J., Fillmore, Christine M., Lau, Allison N., Gludish, David W., Chou, Alan, Ho, Joshua W.K., Zamponi, Raffaella, Gazit, Roi, Bock, Christoph, Jäger, Natalie, Smith, Zachary D., Kim, Tae-min, Saunders, Arven H., Wong, Janice, Lee, Joo-Hyeon, Roach, Rebecca R., Rossi, Derrick J., Meissner, Alex, Gimelbrant, Alexander A., Park, Peter J., Kim, Carla F.
Published in Cell stem cell (02.09.2011)
Published in Cell stem cell (02.09.2011)
Get full text
Journal Article
Effect of machine learning re-sampling techniques for imbalanced datasets in 18 F-FDG PET-based radiomics model on prognostication performance in cohorts of head and neck cancer patients
Xie, Chenyi, Du, Richard, Ho, Joshua Wk, Pang, Herbert H, Chiu, Keith Wh, Lee, Elaine Yp, Vardhanabhuti, Varut
Published in European journal of nuclear medicine and molecular imaging (01.11.2020)
Get full text
Published in European journal of nuclear medicine and molecular imaging (01.11.2020)
Journal Article
How to test bioinformatics software?
Kamali, Amir Hossein, Giannoulatou, Eleni, Chen, Tsong Yueh, Charleston, Michael A., McEwan, Alistair L., Ho, Joshua W. K.
Published in Biophysical reviews (01.09.2015)
Published in Biophysical reviews (01.09.2015)
Get full text
Journal Article