TCR signal strength controls thymic differentiation of iNKT cell subsets
Tuttle, Kathryn D, Krovi, S Harsha, Zhang, Jingjing, Bedel, Romain, Harmacek, Laura, Peterson, Lisa K, Dragone, Leonard L, Lefferts, Adam, Halluszczak, Catherine, Riemondy, Kent, Hesselberth, Jay R, Rao, Anjana, O'Connor, Brian P, Marrack, Philippa, Scott-Browne, James, Gapin, Laurent
Published in Nature communications (09.07.2018)
Published in Nature communications (09.07.2018)
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Journal Article
High resolution mapping of modified DNA nucleobases using excision repair enzymes
Bryan, D Suzi, Ransom, Monica, Adane, Biniam, York, Kerri, Hesselberth, Jay R
Published in Genome research (01.09.2014)
Published in Genome research (01.09.2014)
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Journal Article
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
Stamatoyannopoulos, John A, Hesselberth, Jay R, Chen, Xiaoyu, Zhang, Zhihong, Sabo, Peter J, Sandstrom, Richard, Reynolds, Alex P, Thurman, Robert E, Neph, Shane, Kuehn, Michael S, Noble, William S, Fields, Stanley
Published in Nature methods (01.04.2009)
Published in Nature methods (01.04.2009)
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Journal Article
Cell-level metadata are indispensable for documenting single-cell sequencing datasets
Puntambekar, Sidhant, Hesselberth, Jay R, Riemondy, Kent A, Fu, Rui
Published in PLoS biology (04.05.2021)
Published in PLoS biology (04.05.2021)
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Journal Article
Physiologic RNA targets and refined sequence specificity of coronavirus EndoU
Ancar, Rachel, Li, Yize, Kindler, Eveline, Cooper, Daphne A, Ransom, Monica, Thiel, Volker, Weiss, Susan R, Hesselberth, Jay R, Barton, David J
Published in RNA (Cambridge) (01.12.2020)
Published in RNA (Cambridge) (01.12.2020)
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Journal Article
Single-Cell RNA Sequencing of Childhood Ependymoma Reveals Neoplastic Cell Subpopulations That Impact Molecular Classification and Etiology
Gillen, Austin E., Riemondy, Kent A., Amani, Vladimir, Griesinger, Andrea M., Gilani, Ahmed, Venkataraman, Sujatha, Madhavan, Krishna, Prince, Eric, Sanford, Bridget, Hankinson, Todd C., Handler, Michael H., Vibhakar, Rajeev, Jones, Ken L., Mitra, Siddhartha, Hesselberth, Jay R., Foreman, Nicholas K., Donson, Andrew M.
Published in Cell reports (Cambridge) (11.08.2020)
Published in Cell reports (Cambridge) (11.08.2020)
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Journal Article
Genome‐Wide Analysis of miRNA‐mRNA Interactions in Marrow Stromal Cells
Balakrishnan, Ilango, Yang, Xiaodong, Brown, Joseph, Ramakrishnan, Aravind, Torok‐Storb, Beverly, Kabos, Peter, Hesselberth, Jay R., Pillai, Manoj M.
Published in Stem cells (Dayton, Ohio) (01.03.2014)
Published in Stem cells (Dayton, Ohio) (01.03.2014)
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Journal Article
Genetic bypass of essential RNA repair enzymes in budding yeast
Cherry, Patrick D, White, Laura K, York, Kerri, Hesselberth, Jay R
Published in RNA (Cambridge) (01.03.2018)
Published in RNA (Cambridge) (01.03.2018)
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Journal Article
Chronic Liver Disease in Humans Causes Expansion and Differentiation of Liver Lymphatic Endothelial Cells
Tamburini, Beth A Jiron, Finlon, Jeffrey M, Gillen, Austin E, Kriss, Michael S, Riemondy, Kent A, Fu, Rui, Schuyler, Ronald P, Hesselberth, Jay R, Rosen, Hugo R, Burchill, Matthew A
Published in Frontiers in immunology (15.05.2019)
Published in Frontiers in immunology (15.05.2019)
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Journal Article
Vaccine adjuvant-elicited CD8+ T cell immunity is co-dependent on T-bet and FOXO1
Ivanova, Daria L., Thompson, Scott B., Klarquist, Jared, Harbell, Michael G., Kilgore, Augustus M., Lasda, Erika L., Hesselberth, Jay R., Hunter, Christopher A., Kedl, Ross M.
Published in Cell reports (Cambridge) (29.08.2023)
Published in Cell reports (Cambridge) (29.08.2023)
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Journal Article
clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 2; peer review: 2 approved]
Fu, Rui, Gillen, Austin E, Sheridan, Ryan M, Tian, Chengzhe, Daya, Michelle, Hao, Yue, Hesselberth, Jay R, Riemondy, Kent A
Published in F1000 research (2020)
Published in F1000 research (2020)
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Journal Article
A protein interaction network of the malaria parasite Plasmodium falciparum
Fields, Stanley, Hughes, Robert E, LaCount, Douglas J, Vignali, Marissa, Chettier, Rakesh, Phansalkar, Amit, Bell, Russell, Hesselberth, Jay R, Schoenfeld, Lori W, Ota, Irene, Sahasrabudhe, Sudhir, Kurschner, Cornelia
Published in Nature (03.11.2005)
Published in Nature (03.11.2005)
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Journal Article
Ribonuclease L and metal-ion–independent endoribonuclease cleavage sites in host and viral RNAs
Cooper, Daphne A., Jha, Babal K., Silverman, Robert H., Hesselberth, Jay R., Barton, David J.
Published in Nucleic Acids Research (01.04.2014)
Published in Nucleic Acids Research (01.04.2014)
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Journal Article
Web Resource
Dynamic RNA Regulation in the Brain Underlies Physiological Plasticity in a Hibernating Mammal
Fu, Rui, Gillen, Austin E, Grabek, Katharine R, Riemondy, Kent A, Epperson, L Elaine, Bustamante, Carlos D, Hesselberth, Jay R, Martin, Sandra L
Published in Frontiers in physiology (18.01.2021)
Published in Frontiers in physiology (18.01.2021)
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Journal Article
Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node
Walsh, Shannon M, Sheridan, Ryan M, Lucas, Erin D, Doan, Thu A, Ware, Brian C, Schafer, Johnathon, Fu, Rui, Burchill, Matthew A, Hesselberth, Jay R, Tamburini, Beth Ann Jiron
Published in eLife (12.04.2021)
Published in eLife (12.04.2021)
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Journal Article
A homolog of lariat-debranching enzyme modulates turnover of branched RNA
Garrey, Stephen M, Katolik, Adam, Prekeris, Mantas, Li, Xueni, York, Kerri, Bernards, Sarah, Fields, Stanley, Zhao, Rui, Damha, Masad J, Hesselberth, Jay R
Published in RNA (Cambridge) (01.08.2014)
Published in RNA (Cambridge) (01.08.2014)
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Journal Article
Diverse fates of uracilated HIV-1 DNA during infection of myeloid lineage cells
Hansen, Erik C, Ransom, Monica, Hesselberth, Jay R, Hosmane, Nina N, Capoferri, Adam A, Bruner, Katherine M, Pollack, Ross A, Zhang, Hao, Drummond, Michael Bradley, Siliciano, Janet M, Siliciano, Robert, Stivers, James T
Published in eLife (20.09.2016)
Published in eLife (20.09.2016)
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Journal Article
Localization of Cdc7 Protein Kinase During DNA Replication in Saccharomyces cerevisiae
Rossbach, Daniel, Bryan, D Suzi, Hesselberth, Jay R, Sclafani, Robert
Published in G3 : genes - genomes - genetics (01.11.2017)
Published in G3 : genes - genomes - genetics (01.11.2017)
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