Evolutionary dynamics of Clostridium difficile over short and long time scales
He, Miao, Sebaihia, Mohammed, Lawley, Trevor D, Stabler, Richard A, Dawson, Lisa F, Martin, Melissa J, Holt, Kathryn E, Seth-Smith, Helena M.B, Quail, Michael A, Rance, Richard, Brooks, Karen, Churcher, Carol, Harris, David, Bentley, Stephen D, Burrows, Christine, Clark, Louise, Corton, Craig, Murray, Vicky, Rose, Graham, Thurston, Scott, van Tonder, Andries, Walker, Danielle, Wren, Brendan W, Dougan, Gordon, Parkhill, Julian
Published in Proceedings of the National Academy of Sciences - PNAS (20.04.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (20.04.2010)
Get full text
Journal Article
Novel Organism Verification and Analysis (NOVA) study: identification of 35 clinical isolates representing potentially novel bacterial taxa using a pipeline based on whole genome sequencing
Muigg, Veronika, Seth-Smith, Helena M B, Adam, Kai-Manuel, Weisser, Maja, Hinić, Vladimira, Blaich, Annette, Roloff, Tim, Heininger, Ulrich, Schmid, Hanna, Kohler, Maurus, Graf, Lukas, Winterflood, Dylan M, Schlaepfer, Pascal, Goldenberger, Daniel
Published in BMC microbiology (05.01.2024)
Published in BMC microbiology (05.01.2024)
Get full text
Journal Article
Tick-Borne Relapsing Fever Caused by Borrelia persica in Traveler to Central Asia, 2019
Muigg, Veronika, Seth-Smith, Helena M.B, Goldenberger, Daniel, Egli, Adrian, Nickel, Beatrice, Durig, Roland, Kuenzli, Esther, Hinic, Vladimira, Neumayr, Andreas
Published in Emerging infectious diseases (01.04.2020)
Published in Emerging infectious diseases (01.04.2020)
Get full text
Journal Article
Outbreak with OXA-23-producing Acinetobacter baumannii in a COVID-19 ICU cohort: unraveling routes of transmission
Zingg, Sandra, Kuster, Sabine, von Rotz, Matthias, Portmann, Aurore, Egli, Adrian, Seth-Smith, Helena M B, Schlaepfer, Pascal, Goldenberger, Daniel, Bassetti, Stefano, Marsch, Stephan, Pargger, Hans, Kuehl, Richard, Tschudin-Sutter, Sarah
Published in Antimicrobial resistance & infection control (19.10.2024)
Published in Antimicrobial resistance & infection control (19.10.2024)
Get full text
Journal Article
Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland
Seth-Smith, Helena M.B, Casanova, Carlo, Sommerstein, Rami, Meinel, Dominik M, Abdelbary, Mohamed M.H, Blanc, Dominique S, Droz, Sara, Fuhrer, Urs, Lienhard, Reto, Lang, Claudia, Dubuis, Olivier, Schlegel, Matthias, Widmer, Andreas, Keller, Peter M, Marschall, Jonas, Egli, Adrian
Published in Emerging infectious diseases (01.06.2019)
Published in Emerging infectious diseases (01.06.2019)
Get full text
Journal Article
Novel Chlamydia species isolated from snakes are temperature-sensitive and exhibit decreased susceptibility to azithromycin
Staub, Eveline, Marti, Hanna, Biondi, Roberta, Levi, Aurora, Donati, Manuela, Leonard, Cory Ann, Ley, Serej D., Pillonel, Trestan, Greub, Gilbert, Seth-Smith, Helena M. B., Borel, Nicole
Published in Scientific reports (04.04.2018)
Published in Scientific reports (04.04.2018)
Get full text
Journal Article
Tick-Borne Relapsing Fever Caused by Borrelia persica in Traveler to Central Asia, 2019
Muigg, Veronika, Seth-Smith, Helena M B, Goldenberger, Daniel, Egli, Adrian, Nickel, Beatrice, Dürig, Roland, Kuenzli, Esther, Hinic, Vladimira, Neumayr, Andreas
Published in Emerging infectious diseases (01.04.2020)
Published in Emerging infectious diseases (01.04.2020)
Get full text
Journal Article
Culture‐independent genomics of a novel chlamydial pathogen of fish provides new insight into host‐specific adaptations utilized by these intracellular bacteria
Taylor‐Brown, Alyce, Pillonel, Trestan, Bridle, Andrew, Qi, Weihong, Bachmann, Nathan L., Miller, Terrence L., Greub, Gilbert, Nowak, Barbara, Seth‐Smith, Helena M.B., Vaughan, Lloyd, Polkinghorne, Adam
Published in Environmental microbiology (01.05.2017)
Published in Environmental microbiology (01.05.2017)
Get full text
Journal Article
Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland
Seth-Smith, Helena M B, Casanova, Carlo, Sommerstein, Rami, Meinel, Dominik M, Abdelbary, Mohamed M H, Blanc, Dominique S, Droz, Sara, Führer, Urs, Lienhard, Reto, Lang, Claudia, Dubuis, Olivier, Schlegel, Matthias, Widmer, Andreas, Keller, Peter M, Marschall, Jonas, Egli, Adrian
Published in Emerging infectious diseases (01.06.2019)
Published in Emerging infectious diseases (01.06.2019)
Get full text
Journal Article
Generating whole bacterial genome sequences of low-abundance species from complex samples with IMS-MDA
Seth-Smith, Helena M B, Harris, Simon R, Scott, Paul, Parmar, Surendra, Marsh, Peter, Unemo, Magnus, Clarke, Ian N, Parkhill, Julian, Thomson, Nicholas R
Published in Nature protocols (01.12.2013)
Published in Nature protocols (01.12.2013)
Get full text
Journal Article
A Case Study of Zoonotic Chlamydia abortus Infection: Diagnostic Challenges From Clinical and Microbiological Perspectives
Burgener, Anne-Valérie, Seth-Smith, Helena M B, Kern-Baumann, Sina, Durovic, Ana, Blaich, Anette, Menter, Thomas, Bruder, Elisabeth, Roloff, Tim, Martinez, Aurélien, Borel, Nicole, Albini, Sarah, Hösli, Irene, Egli, Adrian, Weisser, Maja, Hinić, Vladimira
Published in Open forum infectious diseases (01.10.2022)
Published in Open forum infectious diseases (01.10.2022)
Get full text
Journal Article
Plasmid deficiency in urogenital isolates of Chlamydia trachomatis reduces infectivity and virulence in a mouse model
Sigar, Ira M., Schripsema, Justin H., Wang, Yibing, Clarke, Ian N., Cutcliffe, Lesley T., Seth-Smith, Helena M.B., Thomson, Nicholas R., Bjartling, Carina, Unemo, Magnus, Persson, Kenneth, Ramsey, Kyle H.
Published in Pathogens and disease (01.02.2014)
Published in Pathogens and disease (01.02.2014)
Get full text
Journal Article
Diagnostic challenges within the Bacillus cereus-group: finding the beast without teeth
Muigg, Veronika, Cuénod, Aline, Purushothaman, Srinithi, Siegemund, Martin, Wittwer, Matthias, Pflüger, Valentin, Schmidt, Kristina M., Weisser, Maja, Ritz, Nicole, Widmer, Andreas, Goldenberger, Daniel, Hinic, Vladimira, Roloff, Tim, Søgaard, Kirstine K., Egli, Adrian, Seth-Smith, Helena M.B.
Published in New microbes and new infections (01.11.2022)
Published in New microbes and new infections (01.11.2022)
Get full text
Journal Article
explosive-degrading cytochrome P450 activity and its targeted application for the phytoremediation of RDX
Rylott, E.L, Jackson, R.G, Edwards, J, Womack, G.L, Seth-Smith, H.M.B, Rathbone, D.A, Strand, S.E, Bruce, N.C
Published in Nature biotechnology (01.02.2006)
Published in Nature biotechnology (01.02.2006)
Get full text
Journal Article
Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study
Egli, Adrian, Saalfrank, Claudia, Goldman, Nina, Brunner, Myrta, Hollenstein, Yvonne, Vogel, Thomas, Augustin, Noémie, Wüthrich, Daniel, Seth-Smith, Helena M.B., Roth, Elisa, Syedbasha, Mohammedyaseen, Mueller, Nicola F., Vogt, Dominik, Bauer, Jan, Amar-Sliwa, Nadezhda, Meinel, Dominik M., Dubuis, Olivier, Naegele, Michael, Tschudin-Sutter, Sarah, Buser, Andreas, Nickel, Christian H., Zeller, Andreas, Ritz, Nicole, Battegay, Manuel, Stadler, Tanja, Schneider-Sliwa, Rita
Published in BMJ open (01.08.2019)
Published in BMJ open (01.08.2019)
Get full text
Journal Article
Determinants of SARS-CoV-2 transmission to guide vaccination strategy in an urban area
Brüningk, Sarah C, Klatt, Juliane, Stange, Madlen, Mari, Alfredo, Brunner, Myrta, Roloff, Tim-Christoph, Seth-Smith, Helena M B, Schweitzer, Michael, Leuzinger, Karoline, Søgaard, Kirstine K, Albertos Torres, Diana, Gensch, Alexander, Schlotterbeck, Ann-Kathrin, Nickel, Christian H, Ritz, Nicole, Heininger, Ulrich, Bielicki, Julia, Rentsch, Katharina, Fuchs, Simon, Bingisser, Roland, Siegemund, Martin, Pargger, Hans, Ciardo, Diana, Dubuis, Olivier, Buser, Andreas, Tschudin-Sutter, Sarah, Battegay, Manuel, Schneider-Sliwa, Rita, Borgwardt, Karsten M, Hirsch, Hans H, Egli, Adrian
Published in Virus evolution (2022)
Published in Virus evolution (2022)
Get full text
Journal Article
Evaluation of the RESIST ACINETO multiplex immunochromatographic assay for detection of OXA-23-like, OXA-40/58-like and NDM carbapenemase production in Acinetobacter baumannii
Mancini, Stefano, Seth-Smith, Helena M B, Kolesnik-Goldmann, Natalia, Hinic, Vladimira, Roloff, Tim, Imkamp, Frank, Egli, Adrian
Published in Journal of antimicrobial chemotherapy (06.11.2023)
Published in Journal of antimicrobial chemotherapy (06.11.2023)
Get full text
Journal Article