Open-boundary Hamiltonian adaptive resolution. From grand canonical to non-equilibrium molecular dynamics simulations
Heidari, Maziar, Kremer, Kurt, Golestanian, Ramin, Potestio, Raffaello, Cortes-Huerto, Robinson
Published in The Journal of chemical physics (21.05.2020)
Published in The Journal of chemical physics (21.05.2020)
Get full text
Journal Article
Steering a solute between coexisting solvation states: Revisiting nonequilibrium work relations and the calculation of free energy differences
Heidari, Maziar, Cortes-Huerto, Robinson, Potestio, Raffaello, Kremer, Kurt
Published in The Journal of chemical physics (14.10.2019)
Published in The Journal of chemical physics (14.10.2019)
Get full text
Journal Article
Combined Experimental and Theoretical Investigation of Heating Rate on Growth of Iron Oxide Nanoparticles
Sharifi Dehsari, Hamed, Heidari, Maziar, Halda Ribeiro, Anielen, Tremel, Wolfgang, Jakob, Gerhard, Donadio, Davide, Potestio, Raffaello, Asadi, Kamal
Published in Chemistry of materials (28.11.2017)
Published in Chemistry of materials (28.11.2017)
Get full text
Journal Article
Confinement dynamics of a semiflexible chain inside nano-spheres
Fathizadeh, A, Heidari, Maziar, Eslami-Mossallam, B, Ejtehadi, M R
Published in The Journal of chemical physics (28.07.2013)
Published in The Journal of chemical physics (28.07.2013)
Get more information
Journal Article
The in-cell liquid-like state of the nuclear pore complex permeability barrier
Yu, Miao, Heidari, Maziar, Hummer, Gerhard, Lemke, Edward A.
Published in Biophysical journal (08.02.2024)
Published in Biophysical journal (08.02.2024)
Get full text
Journal Article
A topology framework for macromolecular complexes and condensates
Heidari, Maziar, Moes, Duane, Schullian, Otto, Scalvini, Barbara, Mashaghi, Alireza
Published in Nano research (01.11.2022)
Published in Nano research (01.11.2022)
Get full text
Journal Article
Modeling the moving parts of the cellular machinery
Hummer, Gerhard, Blanc, Florian E.C., Heidari, Maziar, Kim, Hyuntae, Palacio-Rodriguez, Karen
Published in Biophysical journal (08.02.2024)
Published in Biophysical journal (08.02.2024)
Get full text
Journal Article
Visualizing the disordered nuclear transport machinery in situ
Yu, Miao, Heidari, Maziar, Mikhaleva, Sofya, Tan, Piau Siong, Mingu, Sara, Ruan, Hao, Reinkemeier, Christopher D, Obarska-Kosinska, Agnieszka, Siggel, Marc, Beck, Martin, Hummer, Gerhard, Lemke, Edward A
Published in Nature (London) (04.05.2023)
Published in Nature (London) (04.05.2023)
Get full text
Journal Article
Development of a Virtual Cell Model to Predict Cell Response to Substrate Topography
Heydari, Tiam, Heidari, Maziar, Mashinchian, Omid, Wojcik, Michal, Xu, Ke, Dalby, Matthew John, Mahmoudi, Morteza, Ejtehadi, Mohammad Reza
Published in ACS nano (26.09.2017)
Published in ACS nano (26.09.2017)
Get full text
Journal Article
Unwrapping NPT Simulations to Calculate Diffusion Coefficients
Bullerjahn, Jakob Tómas, von Bülow, Sören, Heidari, Maziar, Hénin, Jérôme, Hummer, Gerhard
Published in Journal of chemical theory and computation (13.06.2023)
Published in Journal of chemical theory and computation (13.06.2023)
Get full text
Journal Article
Topology of polymer chains under nanoscale confinement
Satarifard, Vahid, Heidari, Maziar, Mashaghi, Samaneh, Tans, Sander J, Ejtehadi, Mohammad Reza, Mashaghi, Alireza
Published in Nanoscale (07.09.2017)
Published in Nanoscale (07.09.2017)
Get full text
Journal Article
Topology of internally constrained polymer chains
Heidari, Maziar, Satarifard, Vahid, Tans, Sander J, Ejtehadi, Mohammad Reza, Mashaghi, Samaneh, Mashaghi, Alireza
Published in Physical chemistry chemical physics : PCCP (19.07.2017)
Published in Physical chemistry chemical physics : PCCP (19.07.2017)
Get full text
Journal Article
Concurrent coupling of realistic and ideal models of liquids and solids in Hamiltonian adaptive resolution simulations
Heidari, Maziar, Cortes-Huerto, Robinson, Kremer, Kurt, Potestio, Raffaello
Published in The European physical journal. E, Soft matter and biological physics (23.05.2018)
Published in The European physical journal. E, Soft matter and biological physics (23.05.2018)
Get full text
Journal Article
Tackling the Limitations of Copolymeric Small Interfering RNA Delivery Agents by a Combined Experimental–Computational Approach
Tabujew, Ilja, Heidari, Maziar, Freidel, Christoph, Helm, Mark, Tebbe, Lars, Wolfrum, Uwe, Nagel-Wolfrum, Kerstin, Koynov, Kaloian, Biehl, Philip, Schacher, Felix H, Potestio, Raffaello, Peneva, Kalina
Published in Biomacromolecules (09.12.2019)
Published in Biomacromolecules (09.12.2019)
Get full text
Journal Article