DeepVelo: deep learning extends RNA velocity to multi-lineage systems with cell-specific kinetics
Cui, Haotian, Maan, Hassaan, Vladoiu, Maria C, Zhang, Jiao, Taylor, Michael D, Wang, Bo
Published in Genome Biology (19.01.2024)
Published in Genome Biology (19.01.2024)
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Journal Article
Multiscale interactome analysis coupled with off-target drug predictions reveals drug repurposing candidates for human coronavirus disease
Sugiyama, Michael G, Cui, Haotian, Redka, Dar'ya S, Karimzadeh, Mehran, Rujas, Edurne, Maan, Hassaan, Hayat, Sikander, Cheung, Kyle, Misra, Rahul, McPhee, Joseph B, Viirre, Russell D, Haller, Andrew, Botelho, Roberto J, Karshafian, Raffi, Sabatinos, Sarah A, Fairn, Gregory D, Madani Tonekaboni, Seyed Ali, Windemuth, Andreas, Julien, Jean-Philippe, Shahani, Vijay, MacKinnon, Stephen S, Wang, Bo, Antonescu, Costin N
Published in Scientific reports (02.12.2021)
Published in Scientific reports (02.12.2021)
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Journal Article
A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture
Nasir, Jalees A, Kozak, Robert A, Aftanas, Patryk, Raphenya, Amogelang R, Smith, Kendrick M, Maguire, Finlay, Maan, Hassaan, Alruwaili, Muhannad, Banerjee, Arinjay, Mbareche, Hamza, Alcock, Brian P, Knox, Natalie C, Mossman, Karen, Wang, Bo, Hiscox, Julian A, McArthur, Andrew G, Mubareka, Samira
Published in Viruses (15.08.2020)
Published in Viruses (15.08.2020)
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Journal Article
Correction to: Correlation of 3T multiparametric prostate MRI using prostate imaging reporting and data system (PIRADS) version 2 with biopsy as reference standard
Mathur, Shobhit, O’Malley, Martin E., Ghai, Sangeet, Jhaveri, Kartik, Sreeharsha, Boraiah, Margolis, Myles, Zhong, Lehang, Maan, Hassaan, Toi, Ants
Published in Abdominal imaging (01.03.2020)
Published in Abdominal imaging (01.03.2020)
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Journal Article
Experimental and natural evidence of SARS-CoV-2-infection-induced activation of type I interferon responses
Banerjee, Arinjay, El-Sayes, Nader, Budylowski, Patrick, Jacob, Rajesh Abraham, Richard, Daniel, Maan, Hassaan, Aguiar, Jennifer A., Demian, Wael L., Baid, Kaushal, D'Agostino, Michael R., Ang, Jann Catherine, Murdza, Tetyana, Tremblay, Benjamin J.-M., Afkhami, Sam, Karimzadeh, Mehran, Irving, Aaron T., Yip, Lily, Ostrowski, Mario, Hirota, Jeremy A., Kozak, Robert, Capellini, Terence D., Miller, Matthew S., Wang, Bo, Mubareka, Samira, McGeer, Allison J., McArthur, Andrew G., Doxey, Andrew C., Mossman, Karen
Published in iScience (21.05.2021)
Published in iScience (21.05.2021)
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Journal Article
Imbalanced single-cell data integration leads to loss of biological information
Published in Nature biotechnology
(01.03.2024)
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Journal Article
Genotyping SARS-CoV-2 through an interactive web application
Maan, Hassaan, Mbareche, Hamza, Raphenya, Amogelang R, Banerjee, Arinjay, Nasir, Jalees A, Kozak, Robert A, Knox, Natalie, Mubareka, Samira, McArthur, Andrew G, Wang, Bo
Published in The Lancet Digital Health (01.07.2020)
Published in The Lancet Digital Health (01.07.2020)
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Journal Article
Web Resource
Mucormycosis in a patient with COVID-19 with uncontrolled diabetes
Shakir, Muhammad, Maan, Muhammad Hassaan Arif, Waheed, Shahan
Published in BMJ case reports (29.07.2021)
Published in BMJ case reports (29.07.2021)
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Journal Article
scGPT: toward building a foundation model for single-cell multi-omics using generative AI
Cui, Haotian, Wang, Chloe, Maan, Hassaan, Pang, Kuan, Luo, Fengning, Duan, Nan, Wang, Bo
Published in Nature methods (01.08.2024)
Published in Nature methods (01.08.2024)
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Journal Article
Characterizing the impacts of dataset imbalance on single-cell data integration
Maan, Hassaan, Zhang, Lin, Yu, Chengxin, Geuenich, Michael J, Campbell, Kieran R, Wang, Bo
Published in Nature biotechnology (01.03.2024)
Published in Nature biotechnology (01.03.2024)
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Journal Article
Colony stimulating factor-1 producing endothelial cells and mesenchymal stromal cells maintain monocytes within a perivascular bone marrow niche
Emoto, Takuo, Lu, Jessie, Sivasubramaniyam, Tharini, Maan, Hassaan, Khan, Aniqa B., Abow, Amina A., Schroer, Stephanie A., Hyduk, Sharon J., Althagafi, Marwan G., McKee, Trevor D., Fu, Fred, Shabro, Shiva, Ulndreaj, Antigona, Chiu, Felix, Paneda, Elvira, Pacheco, Shaun, Wang, Tao, Li, Angela, Jiang, Jean X., Libby, Peter, Husain, Mansoor, Wang, Bo, Rubin, Barry B., Cybulsky, Myron I., Robbins, Clinton S.
Published in Immunity (Cambridge, Mass.) (10.05.2022)
Published in Immunity (Cambridge, Mass.) (10.05.2022)
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Journal Article
In memoriam: David V. Feliciano (1944–2024)—Pioneer, master surgeon, mentor, friend, ally
Sohail, Amir Humza, Maan, Muhammad Hassaan Arif, Goyal, Aman, Ahmad, Muhammad Mursaleen, Sheikh, Abu Baker
Published in Injury (01.06.2024)
Published in Injury (01.06.2024)
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Journal Article
Hepatocellular carcinoma national burden across different geographical regions in the United States between 2001 and 2020
Abboud, Yazan, Malhotra, Raj, Maan, Muhammad Hassaan Arif, Mathew, Anna, Abboud, Ibrahim, Pan, Chun-Wei, Alsakarneh, Saqr, Jaber, Fouad, Mohamed, Islam, Kim, David, Pyrsopoulos, Nikolaos T
Published in World journal of methodology (20.12.2024)
Published in World journal of methodology (20.12.2024)
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Journal Article
Glomuvenous Malformation of the Neck
Khan, Muhammad Salman, Sohail, Amir Humza, Hilal, Kiran, Maan, Muhammad Hassaan Arif
Published in The International journal of angiology (01.12.2020)
Published in The International journal of angiology (01.12.2020)
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