RIPK3 Activates Parallel Pathways of MLKL-Driven Necroptosis and FADD-Mediated Apoptosis to Protect against Influenza A Virus
Nogusa, Shoko, Thapa, Roshan J., Dillon, Christopher P., Liedmann, Swantje, Oguin, Thomas H., Ingram, Justin P., Rodriguez, Diego A., Kosoff, Rachelle, Sharma, Shalini, Sturm, Oliver, Verbist, Katherine, Gough, Peter J., Bertin, John, Hartmann, Boris M., Sealfon, Stuart C., Kaiser, William J., Mocarski, Edward S., López, Carolina B., Thomas, Paul G., Oberst, Andrew, Green, Douglas R., Balachandran, Siddharth
Published in Cell host & microbe (13.07.2016)
Published in Cell host & microbe (13.07.2016)
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Journal Article
High-density single cell mRNA sequencing to characterize circulating tumor cells in hepatocellular carcinoma
D’Avola, Delia, Villacorta-Martin, Carlos, Martins-Filho, Sebastiao N., Craig, Amanda, Labgaa, Ismail, von Felden, Johann, Kimaada, Allette, Bonaccorso, Antoinette, Tabrizian, Parissa, Hartmann, Boris M., Sebra, Robert, Schwartz, Myron, Villanueva, Augusto
Published in Scientific reports (01.08.2018)
Published in Scientific reports (01.08.2018)
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Journal Article
Genetic pathway in acquisition and loss of vancomycin resistance in a methicillin resistant Staphylococcus aureus (MRSA) strain of clonal type USA300
Gardete, Susana, Kim, Choonkeun, Hartmann, Boris M, Mwangi, Michael, Roux, Christelle M, Dunman, Paul M, Chambers, Henry F, Tomasz, Alexander
Published in PLoS pathogens (01.02.2012)
Published in PLoS pathogens (01.02.2012)
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Journal Article
Interactive Big Data Resource to Elucidate Human Immune Pathways and Diseases
Gorenshteyn, Dmitriy, Zaslavsky, Elena, Fribourg, Miguel, Park, Christopher Y., Wong, Aaron K., Tadych, Alicja, Hartmann, Boris M., Albrecht, Randy A., García-Sastre, Adolfo, Kleinstein, Steven H., Troyanskaya, Olga G., Sealfon, Stuart C.
Published in Immunity (Cambridge, Mass.) (15.09.2015)
Published in Immunity (Cambridge, Mass.) (15.09.2015)
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Journal Article
Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death
Hartmann, Boris M., Albrecht, Randy A., Zaslavsky, Elena, Nudelman, German, Pincas, Hanna, Marjanovic, Nada, Schotsaert, Michael, Martínez-Romero, Carles, Fenutria, Rafael, Ingram, Justin P., Ramos, Irene, Fernandez-Sesma, Ana, Balachandran, Siddharth, García-Sastre, Adolfo, Sealfon, Stuart C.
Published in Nature communications (05.12.2017)
Published in Nature communications (05.12.2017)
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Journal Article
Differential Modulation of Innate Immune Responses in Human Primary Cells by Influenza A Viruses Carrying Human or Avian Nonstructural Protein 1
Monteagudo, Paula L, Muñoz-Moreno, Raquel, Fribourg, Miguel, Potla, Uma, Mena, Ignacio, Marjanovic, Nada, Hartmann, Boris M, Sealfon, Stuart C, García-Sastre, Adolfo, Ramos, Irene, Fernández-Sesma, Ana
Published in Journal of virology (12.12.2019)
Published in Journal of virology (12.12.2019)
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Journal Article
Deciphering the combinatorial landscape of immunity
Cappuccio, Antonio, Jensen, Shane T, Hartmann, Boris M, Sealfon, Stuart C, Soumelis, Vassili, Zaslavsky, Elena
Published in eLife (23.11.2020)
Published in eLife (23.11.2020)
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Journal Article
Comparing Host Module Activation Patterns and Temporal Dynamics in Infection by Influenza H1N1 Viruses
Nudelman, Irina, Kudrin, Daniil, Nudelman, German, Deshpande, Raamesh, Hartmann, Boris M., Kleinstein, Steven H., Myers, Chad L., Sealfon, Stuart C., Zaslavsky, Elena
Published in Frontiers in immunology (14.07.2021)
Published in Frontiers in immunology (14.07.2021)
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Journal Article
Mass cytometry profiling the response of basophils and the complete peripheral blood compartment to peanut
Tordesillas, Leticia, PhD, Rahman, Adeeb H., PhD, Hartmann, Boris M., PhD, Sampson, Hugh A., MD, Berin, M. Cecilia, PhD
Published in Journal of allergy and clinical immunology (01.12.2016)
Published in Journal of allergy and clinical immunology (01.12.2016)
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Journal Article
Pathway-level information extractor (PLIER) for gene expression data
Mao, Weiguang, Zaslavsky, Elena, Hartmann, Boris M., Sealfon, Stuart C., Chikina, Maria
Published in Nature methods (01.07.2019)
Published in Nature methods (01.07.2019)
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Journal Article
Understanding multicellular function and disease with human tissue-specific networks
Greene, Casey S, Krishnan, Arjun, Wong, Aaron K, Ricciotti, Emanuela, Zelaya, Rene A, Himmelstein, Daniel S, Zhang, Ran, Hartmann, Boris M, Zaslavsky, Elena, Sealfon, Stuart C, Chasman, Daniel I, FitzGerald, Garret A, Dolinski, Kara, Grosser, Tilo, Troyanskaya, Olga G
Published in Nature genetics (01.06.2015)
Published in Nature genetics (01.06.2015)
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Journal Article
Different tissue phagocytes sample apoptotic cells to direct distinct homeostasis programs
Cummings, Ryan J., Barbet, Gaetan, Bongers, Gerold, Hartmann, Boris M., Gettler, Kyle, Muniz, Luciana, Furtado, Glaucia C., Cho, Judy, Lira, Sergio A., Blander, J. Magarian
Published in Nature (London) (24.11.2016)
Published in Nature (London) (24.11.2016)
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Journal Article
Mouse Dendritic Cell (DC) Influenza Virus Infectivity Is Much Lower than That for Human DCs and Is Hemagglutinin Subtype Dependent
Hartmann, Boris M, Li, Wenjing, Jia, Jingjing, Patil, Sonali, Marjanovic, Nada, Martínez-Romero, Carles, Albrecht, Randy A, Hayot, Fernand, García-Sastre, Adolfo, Wetmur, James G, Moran, Thomas M, Sealfon, Stuart C
Published in Journal of Virology (01.02.2013)
Published in Journal of Virology (01.02.2013)
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Journal Article
Innate Immune Response to Influenza Virus at Single-Cell Resolution in Human Epithelial Cells Revealed Paracrine Induction of Interferon Lambda 1
Ramos, Irene, Smith, Gregory, Ruf-Zamojski, Frederique, Martínez-Romero, Carles, Fribourg, Miguel, Carbajal, Edwin A, Hartmann, Boris M, Nair, Venugopalan D, Marjanovic, Nada, Monteagudo, Paula L, DeJesus, Veronica A, Mutetwa, Tinaye, Zamojski, Michel, Tan, Gene S, Jayaprakash, Ciriyam, Zaslavsky, Elena, Albrecht, Randy A, Sealfon, Stuart C, García-Sastre, Adolfo, Fernandez-Sesma, Ana
Published in Journal of virology (15.10.2019)
Published in Journal of virology (15.10.2019)
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Journal Article
Single-cell stabilization method identifies gonadotrope transcriptional dynamics and pituitary cell type heterogeneity
Ruf-Zamojski, Frederique, Ge, Yongchao, Nair, Venugopalan, Zamojski, Michel, Pincas, Hanna, Toufaily, Chirine, Tome-Garcia, Jessica, Stoeckius, Marlon, Stephenson, William, Smith, Gregory R, Bernard, Daniel J, Tsankova, Nadejda M, Hartmann, Boris M, Fribourg, Miguel, Smibert, Peter, Swerdlow, Harold, Turgeon, Judith L, Sealfon, Stuart C
Published in Nucleic acids research (30.11.2018)
Published in Nucleic acids research (30.11.2018)
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Journal Article
Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses
Hartmann, Boris M, Thakar, Juilee, Albrecht, Randy A, Avey, Stefan, Zaslavsky, Elena, Marjanovic, Nada, Chikina, Maria, Fribourg, Miguel, Hayot, Fernand, Schmolke, Mirco, Meng, Hailong, Wetmur, James, García-Sastre, Adolfo, Kleinstein, Steven H, Sealfon, Stuart C
Published in Journal of virology (01.10.2015)
Published in Journal of virology (01.10.2015)
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Journal Article
Interpretation of an individual functional genomics experiment guided by massive public data
Lee, Young-suk, Wong, Aaron K., Tadych, Alicja, Hartmann, Boris M., Park, Christopher Y., DeJesus, Veronica A., Ramos, Irene, Zaslavsky, Elena, Sealfon, Stuart C., Troyanskaya, Olga G.
Published in Nature methods (01.12.2018)
Published in Nature methods (01.12.2018)
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Journal Article
Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection
Zaslavsky, Elena, Nudelman, German, Marquez, Susanna, Hershberg, Uri, Hartmann, Boris M, Thakar, Juilee, Sealfon, Stuart C, Kleinstein, Steven H
Published in BMC bioinformatics (17.04.2013)
Published in BMC bioinformatics (17.04.2013)
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Journal Article