Suppression of Somatic Expansion Delays the Onset of Pathophysiology in a Mouse Model of Huntington's Disease
Budworth, Helen, Harris, Faye R, Williams, Paul, Lee, Do Yup, Holt, Amy, Pahnke, Jens, Szczesny, Bartosz, Acevedo-Torres, Karina, Ayala-Peña, Sylvette, McMurray, Cynthia T
Published in PLoS genetics (01.08.2015)
Published in PLoS genetics (01.08.2015)
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Journal Article
Identification of independent primary tumors and intrapulmonary metastases using DNA rearrangements in non-small-cell lung cancer
Murphy, Stephen J, Aubry, Marie-Christine, Harris, Faye R, Halling, Geoffrey C, Johnson, Sarah H, Terra, Simone, Drucker, Travis M, Asiedu, Michael K, Kipp, Benjamin R, Yi, Eunhee S, Peikert, Tobias, Yang, Ping, Vasmatzis, George, Wigle, Dennis A
Published in Journal of clinical oncology (20.12.2014)
Published in Journal of clinical oncology (20.12.2014)
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Journal Article
Personalized tumor-specific DNA junctions to detect circulating tumor in patients with endometrial cancer
Grassi, Tommaso, Harris, Faye R, Smadbeck, James B, Murphy, Stephen J, Block, Matthew S, Multinu, Francesco, Schaefer Klein, Janet L, Zhang, Piyan, Karagouga, Giannoula, Liu, Minetta C, Larish, Alyssa, Lemens, Maureen A, Sommerfield, Marla Kay S, Cappuccio, Serena, Cheville, John C, Vasmatzis, George, Mariani, Andrea
Published in PloS one (10.06.2021)
Published in PloS one (10.06.2021)
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Journal Article
Using Genomics to Differentiate Multiple Primaries From Metastatic Lung Cancer
Murphy, Stephen J., Harris, Faye R., Kosari, Farhad, Barreto Siqueira Parrilha Terra, Simone, Nasir, Aqsa, Johnson, Sarah H., Serla, Vishnu, Smadbeck, James B., Halling, Geoffrey C., Karagouga, Giannoula, Sukov, William R., Leventakos, Konstantinos, Yang, Ping, Peikert, Tobias, Mansfield, Aaron S., Wigle, Dennis A., Yi, Eunhee S., Kipp, Benjamin R., Vasmatzis, George, Aubry, Marie-Christine
Published in Journal of thoracic oncology (01.09.2019)
Published in Journal of thoracic oncology (01.09.2019)
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Journal Article
Neoantigenic Potential of Complex Chromosomal Rearrangements in Mesothelioma
Mansfield, Aaron S., Peikert, Tobias, Smadbeck, James B., Udell, Julia B.M., Garcia-Rivera, Enrique, Elsbernd, Laura, Erskine, Courtney L., Van Keulen, Virginia P., Kosari, Farhad, Murphy, Stephen J., Ren, Hongzheng, Serla, Vishnu V., Schaefer Klein, Janet L., Karagouga, Giannoula, Harris, Faye R., Sosa, Carlos, Johnson, Sarah H., Nevala, Wendy, Markovic, Svetomir N., Bungum, Aaron O., Edell, Eric S., Dong, Haidong, Cheville, John C., Aubry, Marie Christine, Jen, Jin, Vasmatzis, George
Published in Journal of thoracic oncology (01.02.2019)
Published in Journal of thoracic oncology (01.02.2019)
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Journal Article
Targeting HER2 in patient‐derived xenograft ovarian cancer models sensitizes tumors to chemotherapy
Harris, Faye R., Zhang, Piyan, Yang, Lin, Hou, Xiaonan, Leventakos, Konstantinos, Weroha, Saravut J., Vasmatzis, George, Kovtun, Irina V.
Published in Molecular oncology (01.02.2019)
Published in Molecular oncology (01.02.2019)
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Journal Article
Optimizing clinical cytology touch preparations for next generation sequencing
Murphy, Stephen J., Harris, Faye R., Smadbeck, James B., Serla, Vishnu, Karagouga, Giannoula, Johnson, Sarah H., Kosari, Farhad, Pierson, Karlyn E., Bungum, Aaron O., Edell, Eric S., Mansfield, Aaron S., Wigle, Dennis A., Kipp, Benjamin R., Vasmatzis, George, Aubry, Marie Christine
Published in Genomics (San Diego, Calif.) (01.11.2020)
Published in Genomics (San Diego, Calif.) (01.11.2020)
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Journal Article
Quantification of Somatic Chromosomal Rearrangements in Circulating Cell-Free DNA from Ovarian Cancers
Harris, Faye R, Kovtun, Irina V, Smadbeck, James, Multinu, Francesco, Jatoi, Aminah, Kosari, Farhad, Kalli, Kimberly R, Murphy, Stephen J, Halling, Geoffrey C, Johnson, Sarah H, Liu, Minetta C, Mariani, Andrea, Vasmatzis, George
Published in Scientific reports (20.07.2016)
Published in Scientific reports (20.07.2016)
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Journal Article
Renin Production by Juxtaglomerular Cell Tumors and Clear Cell Renal Cell Carcinoma and the Role of Angiotensin Signaling Inhibitors
Gupta, Sounak, Nichols, Paige, Lohse, Christine M, Kosari, Farhad, Kattah, Andrea G, Harris, Faye R, Karagouga, Giannoula, Mehra, Rohit, Fine, Samson W, Reuter, Victor E, Herrera-Hernandez, Loren, Zganjar, Andrew J, Britton, Cameron J, Potretzke, Aaron M, Boorjian, Stephen A, Thompson, R Houston, Jimenez, Rafael E, Leibovich, Bradley C, Garovic, Vesna D, Cheville, John C, Sharma, Vidit
Published in Mayo Clinic proceedings (01.11.2022)
Published in Mayo Clinic proceedings (01.11.2022)
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Journal Article
SVAtools for junction detection of genome-wide chromosomal rearrangements by mate-pair sequencing (MPseq)
Johnson, Sarah H., Smadbeck, James B., Smoley, Stephanie A., Gaitatzes, Athanasios, Murphy, Stephen J., Harris, Faye R., Drucker, Travis M., Zenka, Roman M., Pitel, Beth A., Rowsey, Ross A., Hoppman, Nicole L., Aypar, Umut, Sukov, William R., Jenkins, Robert B., Feldman, Andrew L., Kearney, Hutton M., Vasmatzis, George
Published in Cancer genetics (01.02.2018)
Published in Cancer genetics (01.02.2018)
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Journal Article
Integration of Comprehensive Genomic Analysis and Functional Screening of Affected Molecular Pathways to Inform Cancer Therapy
Vasmatzis, George, Liu, Minetta C., Reganti, Sowjanya, Feathers, Ryan W., Smadbeck, James, Johnson, Sarah H., Schaefer Klein, Janet L., Harris, Faye R., Yang, Lin, Kosari, Farhad, Murphy, Stephen J., Borad, Mitesh J., Thompson, E. Aubrey, Cheville, John C., Anastasiadis, Panos Z.
Published in Mayo Clinic proceedings (01.02.2020)
Published in Mayo Clinic proceedings (01.02.2020)
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Journal Article
Integrated Genomic Analysis of Pancreatic Ductal Adenocarcinomas Reveals Genomic Rearrangement Events as Significant Drivers of Disease
Murphy, Stephen J, Hart, Steven N, Halling, Geoffrey C, Johnson, Sarah H, Smadbeck, James B, Drucker, Travis, Lima, Joema Felipe, Rohakhtar, Fariborz Rakhshan, Harris, Faye R, Kosari, Farhad, Subramanian, Subbaya, Petersen, Gloria M, Wiltshire, Timothy D, Kipp, Benjamin R, Truty, Mark J, McWilliams, Robert R, Couch, Fergus J, Vasmatzis, George
Published in Cancer research (Chicago, Ill.) (01.02.2016)
Published in Cancer research (Chicago, Ill.) (01.02.2016)
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Journal Article
Large Chromosomal Rearrangements Yield Biomarkers to Distinguish Low-Risk From Intermediate- and High-Risk Prostate Cancer
Vasmatzis, George, Kosari, Farhad, Murphy, Stephen J., Terra, Simone, Kovtun, Irina V., Harris, Faye R., Zarei, Shabnam, Smadbeck, James B., Johnson, Sarah H., Gaitatzes, Athanasios G., Therneau, Terry M., Rangel, Laureano J., Knudson, Ryan A., Greipp, Patricia, Sukov, William R., Knutson, Darlene L., Kloft-Nelson, Sara M., Karnes, R. Jeffrey, Cheville, John C.
Published in Mayo Clinic proceedings (01.01.2019)
Published in Mayo Clinic proceedings (01.01.2019)
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Journal Article
Theragnostic chromosomal rearrangements in treatment‐naive pancreatic ductal adenocarcinomas obtained via endoscopic ultrasound
Murphy, Stephen J., Levy, Michael J., Smadbeck, James B., Karagouga, Giannoula, McCune, Alexa F., Harris, Faye R., Udell, Julia B., Johnson, Sarah H., Kerr, Sarah E., Cheville, John C., Kipp, Benjamin R., Vasmatzis, George, Gleeson, Ferga C.
Published in Journal of cellular and molecular medicine (01.04.2021)
Published in Journal of cellular and molecular medicine (01.04.2021)
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Journal Article
Genomic Rearrangements Define Lineage Relationships between Adjacent Lepidic and Invasive Components in Lung Adenocarcinoma
MURPHY, Stephen J, WIGLE, Dennis A, PEIKERT, Tobias, PING YANG, AUBRY, Marie-Christine, VASMATZIS, George, LIMA, Joema Felipe, HARRIS, Faye R, JOHNSON, Sarah H, HAILING, Geoffrey, ASIEDU, Michael K, SETO, Charlie T, TERRA, Simone, KOSARI, Farhad
Published in Cancer research (Chicago, Ill.) (01.06.2014)
Published in Cancer research (Chicago, Ill.) (01.06.2014)
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Journal Article
Targeting HER 2 in patient‐derived xenograft ovarian cancer models sensitizes tumors to chemotherapy
Harris, Faye R., Zhang, Piyan, Yang, Lin, Hou, Xiaonan, Leventakos, Konstantinos, Weroha, Saravut J., Vasmatzis, George, Kovtun, Irina V.
Published in Molecular oncology (01.02.2019)
Published in Molecular oncology (01.02.2019)
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Journal Article
Unraveling the genomic underpinnings of unbalanced MYC break-apart FISH results using whole genome sequencing analysis
Gagnon, Marie-France, Penheiter, Alan R, Harris, Faye, Sadeghian, Dorsay, Johnson, Sarah H, Karagouga, Giannoula, McCune, Alexa, Zepeda-Mendoza, Cinthya, Greipp, Patricia T, Xu, Xinjie, Ketterling, Rhett P, McPhail, Ellen D, King, Rebecca L, Peterson, Jess F, Vasmatzis, George, Baughn, Linda B
Published in Blood cancer journal (New York) (19.12.2023)
Published in Blood cancer journal (New York) (19.12.2023)
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Journal Article
Integrated analysis of the genomic instability of PTEN in clinically insignificant and significant prostate cancer
Murphy, Stephen J, Karnes, Robert J, Kosari, Farhad, Castellar, B Edgardo R Parilla, Kipp, Benjamin R, Johnson, Sarah H, Terra, Simone, Harris, Faye R, Halling, Geoffrey C, Klein, Janet L Schaefer, Nasir, Aqsa, Bergstrahl, Eric, Rangel, Laureano J, Sukov, William R, Vasmatzis, George, Cheville, John C
Published in Modern pathology (01.02.2016)
Published in Modern pathology (01.02.2016)
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Journal Article
Shared and unique genomic structural variants of different histological components within testicular germ cell tumours identified with mate pair sequencing
Bryce, Alan H, Egan, Jan B, Smadbeck, James B, Johnson, Sarah H, Murphy, Stephen J, Harris, Faye R, Halling, Geoffrey C, Terra, Simone B S P, Cheville, John, Pagliaro, Lance, Leibovich, Brad, Costello, Brian A, Vasmatzis, George
Published in Scientific reports (05.03.2019)
Published in Scientific reports (05.03.2019)
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Journal Article
Genomic rearrangements in sporadic lymphangioleiomyomatosis: an evolving genetic story
Murphy, Stephen J, Terra, Simone B, Harris, Faye R, Nasir, Aqsa, Voss, Jesse S, Smadbeck, James B, Johnson, Sarah H, Serla, Vishnu, Ryu, Jay H, Yi, Eunhee S, Kipp, Benjamin R, Vasmatzis, George, Carmona, Eva M
Published in Modern pathology (01.09.2017)
Published in Modern pathology (01.09.2017)
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Journal Article