Automated and optimally FRET-assisted structural modeling
Dimura, Mykola, Peulen, Thomas-Otavio, Sanabria, Hugo, Rodnin, Dmitro, Hemmen, Katherina, Hanke, Christian A, Seidel, Claus A M, Gohlke, Holger
Published in Nature communications (26.10.2020)
Published in Nature communications (26.10.2020)
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Integrative dynamic structural biology unveils conformers essential for the oligomerization of a large GTPase
Peulen, Thomas-O, Hengstenberg, Carola S, Biehl, Ralf, Dimura, Mykola, Lorenz, Charlotte, Valeri, Alessandro, Folz, Julian, Hanke, Christian A, Ince, Semra, Vöpel, Tobias, Farago, Bela, Gohlke, Holger, Klare, Johann P, Stadler, Andreas M, Seidel, Claus A M, Herrmann, Christian
Published in eLife (14.06.2023)
Published in eLife (14.06.2023)
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Quantitative FRET studies and integrative modeling unravel the structure and dynamics of biomolecular systems
Dimura, Mykola, Peulen, Thomas O, Hanke, Christian A, Prakash, Aiswaria, Gohlke, Holger, Seidel, Claus AM
Published in Current opinion in structural biology (01.10.2016)
Published in Current opinion in structural biology (01.10.2016)
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FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices
Lerner, Eitan, Barth, Anders, Hendrix, Jelle, Ambrose, Benjamin, Birkedal, Victoria, Blanchard, Scott C, Börner, Richard, Sung Chung, Hoi, Cordes, Thorben, Craggs, Timothy D, Deniz, Ashok A, Diao, Jiajie, Fei, Jingyi, Gonzalez, Ruben L, Gopich, Irina V, Ha, Taekjip, Hanke, Christian A, Haran, Gilad, Hatzakis, Nikos S, Hohng, Sungchul, Hong, Seok-Cheol, Hugel, Thorsten, Ingargiola, Antonino, Joo, Chirlmin, Kapanidis, Achillefs N, Kim, Harold D, Laurence, Ted, Lee, Nam Ki, Lee, Tae-Hee, Lemke, Edward A, Margeat, Emmanuel, Michaelis, Jens, Michalet, Xavier, Myong, Sua, Nettels, Daniel, Peulen, Thomas-Otavio, Ploetz, Evelyn, Razvag, Yair, Robb, Nicole C, Schuler, Benjamin, Soleimaninejad, Hamid, Tang, Chun, Vafabakhsh, Reza, Lamb, Don C, Seidel, Claus Am, Weiss, Shimon
Published in eLife (29.03.2021)
Published in eLife (29.03.2021)
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Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures
Berman, Helen M., Adams, Paul D., Bonvin, Alexandre A., Burley, Stephen K., Carragher, Bridget, Chiu, Wah, DiMaio, Frank, Ferrin, Thomas E., Gabanyi, Margaret J., Goddard, Thomas D., Griffin, Patrick R., Haas, Juergen, Hanke, Christian A., Hoch, Jeffrey C., Hummer, Gerhard, Kurisu, Genji, Lawson, Catherine L., Leitner, Alexander, Markley, John L., Meiler, Jens, Montelione, Gaetano T., Phillips, George N., Prisner, Thomas, Rappsilber, Juri, Schriemer, David C., Schwede, Torsten, Seidel, Claus A.M., Strutzenberg, Timothy S., Svergun, Dmitri I., Tajkhorshid, Emad, Trewhella, Jill, Vallat, Brinda, Velankar, Sameer, Vuister, Geerten W., Webb, Benjamin, Westbrook, John D., White, Kate L., Sali, Andrej
Published in Structure (London) (03.12.2019)
Published in Structure (London) (03.12.2019)
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IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods
Vallat, Brinda, Webb, Benjamin M., Westbrook, John D., Goddard, Thomas D., Hanke, Christian A., Graziadei, Andrea, Peisach, Ezra, Zalevsky, Arthur, Sagendorf, Jared, Tangmunarunkit, Hongsuda, Voinea, Serban, Sekharan, Monica, Yu, Jian, Bonvin, Alexander A.M.J.J., DiMaio, Frank, Hummer, Gerhard, Meiler, Jens, Tajkhorshid, Emad, Ferrin, Thomas E., Lawson, Catherine L., Leitner, Alexander, Rappsilber, Juri, Seidel, Claus A.M., Jeffries, Cy M., Burley, Stephen K., Hoch, Jeffrey C., Kurisu, Genji, Morris, Kyle, Patwardhan, Ardan, Velankar, Sameer, Schwede, Torsten, Trewhella, Jill, Kesselman, Carl, Berman, Helen M., Sali, Andrej
Published in Journal of molecular biology (01.09.2024)
Published in Journal of molecular biology (01.09.2024)
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Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study
Hellenkamp, Björn, Schmid, Sonja, Doroshenko, Olga, Opanasyuk, Oleg, Kühnemuth, Ralf, Adariani, Soheila Rezaei, Ambrose, Benjamin, Aznauryan, Mikayel, Barth, Anders, Birkedal, Victoria, Bowen, Mark E, Chen, Hongtao, Cordes, Thorben, Eilert, Tobias, Fijen, Carel, Gebhardt, Christian, Götz, Markus, Gouridis, Giorgos, Gratton, Enrico, Ha, Taekjip, Hao, Pengyu, Hanke, Christian A, Hartmann, Andreas, Hendrix, Jelle, Hildebrandt, Lasse L, Hirschfeld, Verena, Hohlbein, Johannes, Hua, Boyang, Hübner, Christian G, Kallis, Eleni, Kapanidis, Achillefs N, Kim, Jae-Yeol, Krainer, Georg, Lamb, Don C, Lee, Nam Ki, Lemke, Edward A, Levesque, Brié, Levitus, Marcia, McCann, James J, Naredi-Rainer, Nikolaus, Nettels, Daniel, Ngo, Thuy, Qiu, Ruoyi, Robb, Nicole C, Röcker, Carlheinz, Sanabria, Hugo, Schlierf, Michael, Schröder, Tim, Schuler, Benjamin, Seidel, Henning, Streit, Lisa, Thurn, Johann, Tinnefeld, Philip, Tyagi, Swati, Vandenberk, Niels, Vera, Andrés Manuel, Weninger, Keith R, Wünsch, Bettina, Yanez-Orozco, Inna S, Michaelis, Jens, Seidel, Claus A M, Craggs, Timothy D, Hugel, Thorsten
Published in Nature methods (01.11.2018)
Published in Nature methods (01.11.2018)
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FRET-Based Integrative Structural Models and Their Database Deposition
Hanke, Christian A., Vardanyan, Hayk, Seidel, Claus A.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study
Hellenkamp, Björn, Schmid, Sonja, Doroshenko, Olga, Opanasyuk, Oleg, Kühnemuth, Ralf, Rezaei Adariani, Soheila, Ambrose, Benjamin, Aznauryan, Mikayel, Barth, Anders, Birkedal, Victoria, Bowen, Mark E, Chen, Hongtao, Cordes, Thorben, Eilert, Tobias, Fijen, Carel, Gebhardt, Christian, Götz, Markus, Gouridis, Giorgos, Gratton, Enrico, Ha, Taekjip, Hao, Pengyu, Hanke, Christian A, Hartmann, Andreas, Hendrix, Jelle, Hildebrandt, Lasse L, Hirschfeld, Verena, Hohlbein, Johannes, Hua, Boyang, Hübner, Christian G, Kallis, Eleni, Kapanidis, Achillefs N, Kim, Jae-Yeol, Krainer, Georg, Lamb, Don C, Lee, Nam Ki, Lemke, Edward A, Levesque, Brié, Levitus, Marcia, McCann, James J, Naredi-Rainer, Nikolaus, Nettels, Daniel, Ngo, Thuy, Qiu, Ruoyi, Robb, Nicole C, Röcker, Carlheinz, Sanabria, Hugo, Schlierf, Michael, Schröder, Tim, Schuler, Benjamin, Seidel, Henning, Streit, Lisa, Thurn, Johann, Tinnefeld, Philip, Tyagi, Swati, Vandenberk, Niels, Vera, Andrés Manuel, Weninger, Keith R, Wünsch, Bettina, Yanez-Orozco, Inna S, Michaelis, Jens, Seidel, Claus A M, Craggs, Timothy D, Hugel, Thorsten
Published in Nature methods (01.09.2018)
Published in Nature methods (01.09.2018)
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Journal Article
From FRET Measurements to Database Deposition of Integrative Structural Models
Hanke, Christian A., Vardanyan, Hayk, Dimura, Mykola, Seidel, Claus A.M.
Published in Biophysical journal (15.02.2019)
Published in Biophysical journal (15.02.2019)
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Journal Article
Single-Molecule Three-Color FRET Reveals Multi-State Conformational Dynamics of RNA Four-Way Junctions
Barth, Anders, Hanke, Christian A., Opanasyuk, Oleg, Vardanyan, Hayk, Sindbert, Simon, Kalinin, Stanislav, Seidel, Claus A.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Integrative Molecular Modelling of Biomolecules Guided by FRET Experiments
Hanke, Christian A., Dimura, Mykola, Peulen, Thomas-Otavio, Gohlke, Holger, Seidel, Claus A.M.
Published in Biophysical journal (02.02.2018)
Published in Biophysical journal (02.02.2018)
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Journal Article
Influence of Sequence Variation on RNA 3WJ Helical Orientation Studied by High-Precision FRET
Doroshenko, Olga, Vardanyan, Hayk, Prakash, Aiswaria, Froebel, Sascha, Kalinin, Stanislav, Sindbert, Simon, Opanasyuk, Oleg, Hanke, Christian A., Mueller, Sabine, Gohlke, Holger, Seidel, Claus A.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
High-Precision FRET Reveals Sequence Dependent Structures of RNA Three-Way Junctions
Doroshenko, Olga, Vardanyan, Hayk, Prakash, Aiswaria, Froebel, Sascha, Kalinin, Stanislav, Sindbert, Simon, Opanasyuk, Oleg, Hanke, Christian A., Mueller, Sabine, Gohlke, Holger, Seidel, Claus A.M.
Published in Biophysical journal (15.02.2019)
Published in Biophysical journal (15.02.2019)
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Journal Article
FRET, SAXS and Molecular Simulations Resolve the Solution Structures of Three Coexisting Conformers of Flexible RNA Four-Way Junction
Vardanyan, Hayk, Sindbert, Simon, Kalinin, Stanislav, Hanke, Christian A., Soltynski, Tomasz, Lach, Grzegorz, Springstubbe, Danilo, Apel, Bettina, Snell, Edward, Grant, Thomas D., Lipfert, Jan, Müller, Sabine, Bujnicki, Janusz M., Gohlke, Holger, Seidel, Claus A.M.
Published in Biophysical journal (03.02.2017)
Published in Biophysical journal (03.02.2017)
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Journal Article
Erratum to: Precision and accuracy of single-molecule FRET measurements—a multi-laboratory benchmark study
Hellenkamp, Björn, Schmid, Sonja, Doroshenko, Olga, Opanasyuk, Oleg, Kühnemuth, Ralf, Adariani, Soheila Rezaei, Ambrose, Benjamin, Aznauryan, Mikayel, Barth, Anders, Birkedal, Victoria, Bowen, Mark E, Chen, Hongtao, Cordes, Thorben, Eilert, Tobias, Fijen, Carel, Gebhardt, Christian, Götz, Markus, Gouridis, Giorgos, Gratton, Enrico, Ha, Taekjip, Hao, Pengyu, Hanke, Christian A, Hartmann, Andreas, Hendrix, Jelle, Hildebrandt, Lasse L, Hirschfeld, Verena, Hohlbein, Johannes, Hua, Boyang, Hübner, Christian G, Kallis, Eleni, Kapanidis, Achillefs N, Kim, Jae Yeol, Krainer, Georg, Lamb, Don C, Lee, Nam Ki, Lemke, Edward A, Levesque, Brié, Levitus, Marcia, McCann, James J, Naredi-Rainer, Nikolaus, Nettels, Daniel, Ngo, Thuy, Qiu, Ruoyi, Robb, Nicole C, Röcker, Carlheinz, Sanabria, Hugo, Schlierf, Michael, Schröder, Tim, Schuler, Benjamin, Seidel, Henning
Published in Nature methods (2018)
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Published in Nature methods (2018)
Journal Article
Precision and accuracy of single-molecule FRET measurements - a worldwide benchmark study
Hellenkamp, Björn, Schmid, Sonja, Doroshenko, Olga, Opanasyuk, Oleg, Kühnemuth, Ralf, Soheila Rezaei Adariani, Barth, Anders, Birkedal, Victoria, Bowen, Mark E, Chen, Hongtao, Cordes, Thorben, Eilert, Tobias, Fijen, Carel, Götz, Markus, Gouridis, Giorgos, Gratton, Enrico, Ha, Taekjip, Hanke, Christian A, Hartmann, Andreas, Hendrix, Jelle, Hildebrandt, Lasse L, Hohlbein, Johannes, Hübner, Christian G, Kallis, Eleni, Kapanidis, Achillefs N, Kim, Jae-Yeol, Krainer, Georg, Lamb, Don C, Lee, Nam Ki, Lemke, Edward A, Levesque, Brié, Levitus, Marcia, McCann, James J, Naredi-Rainer, Nikolaus, Nettels, Daniel, Ngo, Thuy, Qiu, Ruoyi, Röcker, Carlheinz, Sanabria, Hugo, Schlierf, Michael, Schuler, Benjamin, Seidel, Henning, Streit, Lisa, Tinnefeld, Philip, Tyagi, Swati, Vandenberk, Niels, Weninger, Keith R, Wünsch, Bettina, Yanez-Orozco, Inna S, Michaelis, Jens, Seidel, Claus A M, Craggs, Timothy D, Hugel, Thorsten
Published in arXiv.org (29.12.2017)
Published in arXiv.org (29.12.2017)
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