Impacts of human mobility on the citywide transmission dynamics of 18 respiratory viruses in pre- and post-COVID-19 pandemic years
Perofsky, Amanda C., Hansen, Chelsea L., Burstein, Roy, Boyle, Shanda, Prentice, Robin, Marshall, Cooper, Reinhart, David, Capodanno, Ben, Truong, Melissa, Schwabe-Fry, Kristen, Kuchta, Kayla, Pfau, Brian, Acker, Zack, Lee, Jover, Sibley, Thomas R., McDermot, Evan, Rodriguez-Salas, Leslie, Stone, Jeremy, Gamboa, Luis, Han, Peter D., Adler, Amanda, Waghmare, Alpana, Jackson, Michael L., Famulare, Michael, Shendure, Jay, Bedford, Trevor, Chu, Helen Y., Englund, Janet A., Starita, Lea M., Viboud, Cécile
Published in Nature communications (16.05.2024)
Published in Nature communications (16.05.2024)
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Clinical and Genomic Epidemiology of Coxsackievirus A21 and Enterovirus D68 in Homeless Shelters, King County, Washington, USA, 2019-2021
Cox, Sarah N, Casto, Amanda M, Franko, Nicholas M, Chow, Eric J, Han, Peter D, Gamboa, Luis, Pfau, Brian, Xie, Hong, Kong, Kevin, Sereewit, Jaydee, Rolfes, Melissa A, Mosites, Emily, Uyeki, Timothy M, Greninger, Alexander L, Carone, Marco, Shim, M Mia, Bedford, Trevor, Shendure, Jay, Boeckh, Michael, Englund, Janet A, Starita, Lea M, Roychoudhury, Pavitra, Chu, Helen Y
Published in Emerging infectious diseases (01.11.2024)
Published in Emerging infectious diseases (01.11.2024)
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Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus
Weil, Ana A., Luiten, Kyle G., Casto, Amanda M., Bennett, Julia C., O’Hanlon, Jessica, Han, Peter D., Gamboa, Luis S., McDermot, Evan, Truong, Melissa, Gottlieb, Geoffrey S., Acker, Zack, Wolf, Caitlin R., Magedson, Ariana, Chow, Eric J., Lo, Natalie K., Pothan, Lincoln C., McDonald, Devon, Wright, Tessa C., McCaffrey, Kathryn M., Figgins, Marlin D., Englund, Janet A., Boeckh, Michael, Lockwood, Christina M., Nickerson, Deborah A., Shendure, Jay, Bedford, Trevor, Hughes, James P., Starita, Lea M., Chu, Helen Y.
Published in Nature communications (06.09.2022)
Published in Nature communications (06.09.2022)
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Incidence of SARS-CoV-2 infection and associated risk factors among staff and residents at homeless shelters in King County, Washington: an active surveillance study
Rogers, Julia H., Cox, Sarah N., Link, Amy C., Nwanne, Gift, Han, Peter D., Pfau, Brian, Chow, Eric J., Wolf, Caitlin R., Boeckh, Michael, Hughes, James P., Halloran, M. Elizabeth, Uyeki, Timothy M., Shim, M. Mia, Duchin, Jeffrey, Englund, Janet A., Mosites, Emily, Rolfes, Melissa A., Starita, Lea A., Chu, Helen Y.
Published in Epidemiology and infection (10.07.2023)
Published in Epidemiology and infection (10.07.2023)
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Evaluation of a novel university-based testing platform to increase access to SARS-CoV-2 testing during the COVID-19 pandemic in a cohort study
Bennett, Julia Catherine, O’Hanlon, Jessica, Acker, Zachary, Han, Peter D, McDonald, Devon, Wright, Tessa, Luiten, Kyle G, Regelbrugge, Lani, McCaffrey, Kathryn M, Pfau, Brian, Wolf, Caitlin R, Gottlieb, Geoffrey S, Hughes, James P, Carone, Marco, Starita, Lea M, Chu, Helen Y, Weil, Ana A
Published in BMJ open (04.06.2024)
Published in BMJ open (04.06.2024)
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Human Parainfluenza Virus in Homeless Shelters before and during the COVID-19 Pandemic, Washington, USA
Chow, Eric J, Casto, Amanda M, Sampoleo, Reigran, Mills, Margaret G, Han, Peter D, Xie, Hong, Pfau, Brian, Nguyen, Tien V, Sereewit, Jaydee, Rogers, Julia H, Cox, Sarah N, Rolfes, Melissa A, Ogokeh, Constance, Mosites, Emily, Uyeki, Timothy M, Greninger, Alexander L, Hughes, James P, Shim, M Mia, Sugg, Nancy, Duchin, Jeffrey S, Starita, Lea M, Englund, Janet A, Roychoudhury, Pavitra, Chu, Helen Y
Published in Emerging infectious diseases (01.11.2022)
Published in Emerging infectious diseases (01.11.2022)
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Remote surveillance and detection of SARS-CoV-2 transmission among household members in King County, Washington
Emanuels, Anne, Casto, Amanda M, Heimonen, Jessica, O'Hanlon, Jessica, Chow, Eric J, Ogokeh, Constance, Rolfes, Melissa A, Han, Peter D, Hughes, James P, Uyeki, Timothy M, Frazar, Christian, Chung, Erin, Starita, Lea M, Englund, Janet A, Chu, Helen Y
Published in BMC infectious diseases (13.03.2024)
Published in BMC infectious diseases (13.03.2024)
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The Seattle Flu Study: a multiarm community-based prospective study protocol for assessing influenza prevalence, transmission and genomic epidemiology
Chu, Helen Y, Boeckh, Michael, Englund, Janet A, Famulare, Michael, Lutz, Barry, Nickerson, Deborah A, Rieder, Mark, Starita, Lea M, Adler, Amanda, Brandstetter, Elisabeth, Frazer, Chris D, Han, Peter D, Gulati, Reena K, Hadfield, James, Jackson, Michael, Kiavand, Anahita, Kimball, Louise E, Lacombe, Kirsten, Newman, Kira, Sibley, Thomas R, Logue, Jennifer K, Lyon, Victoria Rachel, Wolf, Caitlin R, Zigman Suchsland, Monica, Shendure, Jay, Bedford, Trevor
Published in BMJ open (07.10.2020)
Published in BMJ open (07.10.2020)
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Simpler and faster Covid-19 testing: Strategies to streamline SARS-CoV-2 molecular assays
Panpradist, Nuttada, Wang, Qin, Ruth, Parker S., Kotnik, Jack H., Oreskovic, Amy K., Miller, Abraham, Stewart, Samuel W.A., Vrana, Justin, Han, Peter D., Beck, Ingrid A., Starita, Lea M., Frenkel, Lisa M., Lutz, Barry R.
Published in EBioMedicine (01.02.2021)
Published in EBioMedicine (01.02.2021)
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Multiplex Target-Redundant RT-LAMP for Robust Detection of SARS-CoV-2 Using Fluorescent Universal Displacement Probes
Kline, Enos C, Panpradist, Nuttada, Hull, Ian T, Wang, Qin, Oreskovic, Amy K, Han, Peter D, Starita, Lea M, Lutz, Barry R
Published in Microbiology spectrum (31.08.2022)
Published in Microbiology spectrum (31.08.2022)
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CASCADIA: a prospective community-based study protocol for assessing SARS-CoV-2 vaccine effectiveness in children and adults using a remote nasal swab collection and web-based survey design
Babu, Tara M, Feldstein, Leora R, Saydah, Sharon, Acker, Zachary, Boisvert, Cassandra L, Briggs-Hagen, Melissa, Carone, Marco, Casto, Amanda, Cox, Sarah N, Ehmen, Brenna, Englund, Janet A, Fortmann, Stephen P, Frivold, Collrane J, Groom, Holly, Han, Peter D, Kuntz, Jennifer L, Lockwood, Tina, Midgley, Claire M, Mularski, Richard A, Ogilvie, Tara, Reich, Sacha L, Schmidt, Mark A, Smith, Ning, Starita, Lea, Stone, Jeremy, Vandermeer, Meredith, Weil, Ana A, Wolf, Caitlin R, Chu, Helen Y, Naleway, Allison L
Published in BMJ open (14.07.2023)
Published in BMJ open (14.07.2023)
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Highly Sensitive Immunoresistive Sensor for Point-Of-Care Screening for COVID-19
Li, Tianyi, Soelberg, Scott D, Taylor, Zachary, Sakthivelpathi, Vigneshwar, Furlong, Clement E, Kim, Jong-Hoon, Ahn, Sang-Gyeun, Han, Peter D, Starita, Lea M, Zhu, Jia, Chung, Jae-Hyun
Published in Biosensors (Basel) (28.02.2022)
Published in Biosensors (Basel) (28.02.2022)
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Streptococcus pneumoniae nasal carriage patterns with and without common respiratory virus detections in households in Seattle, WA, USA before and during the COVID-19 pandemic
Bennett, Julia C, Emanuels, Anne, Heimonen, Jessica, O'Hanlon, Jessica, Hughes, James P, Han, Peter D, Chow, Eric J, Ogokeh, Constance E, Rolfes, Melissa A, Lockwood, Christine M, Pfau, Brian, Uyeki, Timothy M, Shendure, Jay, Hoag, Samara, Fay, Kairsten, Lee, Jover, Sibley, Thomas R, Rogers, Julia H, Starita, Lea M, Englund, Janet A, Chu, Helen Y
Published in Frontiers in pediatrics (07.07.2023)
Published in Frontiers in pediatrics (07.07.2023)
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Diagnostic Accuracy of an At-Home, Rapid Self-test for Influenza: Prospective Comparative Accuracy Study
Geyer, Rachel E, Kotnik, Jack Henry, Lyon, Victoria, Brandstetter, Elisabeth, Zigman Suchsland, Monica, Han, Peter D, Graham, Chelsey, Ilcisin, Misja, Kim, Ashley E, Chu, Helen Y, Nickerson, Deborah A, Starita, Lea M, Bedford, Trevor, Lutz, Barry, Thompson, Matthew J
Published in JMIR public health and surveillance (22.02.2022)
Published in JMIR public health and surveillance (22.02.2022)
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The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study
Chow, Eric J., Casto, Amanda M., Rogers, Julia H., Roychoudhury, Pavitra, Han, Peter D., Xie, Hong, Mills, Margaret G., Nguyen, Tien V., Pfau, Brian, Cox, Sarah N., Wolf, Caitlin R., Hughes, James P., Uyeki, Timothy M., Rolfes, Melissa A., Mosites, Emily, Shim, M. Mia, Duchin, Jeffrey S., Sugg, Nancy, Starita, Lea A., Englund, Janet A., Chu, Helen Y.
Published in Lancet Regional Health - Americas (Online) (01.11.2022)
Published in Lancet Regional Health - Americas (Online) (01.11.2022)
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Corrigendum to ‘Simpler and faster Covid-19 testing: Strategies to streamline SARS-CoV-2 molecular assays’
Panpradist, Nuttada, Wang, Qin, Ruth, Parker S., Kotnik, Jack H., Oreskovic, Amy K., Miller, Abraham, Stewart, Samuel W.A., Vrana, Justin, Han, Peter D., Beck, Ingrid A., Starita, Lea M., Frenkel, Lisa M., Lutz, Barry R.
Published in EBioMedicine (01.04.2021)
Published in EBioMedicine (01.04.2021)
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Early Detection of Covid-19 through a Citywide Pandemic Surveillance Platform
Chu, Helen Y, Englund, Janet A, Starita, Lea M, Famulare, Michael, Brandstetter, Elisabeth, Nickerson, Deborah A, Rieder, Mark J, Adler, Amanda, Lacombe, Kirsten, Kim, Ashley E, Graham, Chelsey, Logue, Jennifer, Wolf, Caitlin R, Heimonen, Jessica, McCulloch, Denise J, Han, Peter D, Sibley, Thomas R, Lee, Jover, Ilcisin, Misja, Fay, Kairsten, Burstein, Roy, Martin, Beth, Lockwood, Christina M, Thompson, Matthew, Lutz, Barry, Jackson, Michael, Hughes, James P, Boeckh, Michael, Shendure, Jay, Bedford, Trevor
Published in New England Journal of Medicine (09.07.2020)
Published in New England Journal of Medicine (09.07.2020)
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Cryptic transmission of SARS-CoV-2 in Washington state
Bedford, Trevor, Greninger, Alexander L, Roychoudhury, Pavitra, Starita, Lea M, Famulare, Michael, Huang, Meei-Li, Nalla, Arun, Pepper, Gregory, Reinhardt, Adam, Xie, Hong, Shrestha, Lasata, Nguyen, Truong N, Adler, Amanda, Brandstetter, Elisabeth, Cho, Shari, Giroux, Danielle, Han, Peter D, Fay, Kairsten, Frazar, Chris D, Ilcisin, Misja, Lacombe, Kirsten, Lee, Jover, Kiavand, Anahita, Richardson, Matthew, Sibley, Thomas R, Truong, Melissa, Wolf, Caitlin R, Nickerson, Deborah A, Rieder, Mark J, Englund, Janet A, Hadfield, James, Hodcroft, Emma B, Huddleston, John, Moncla, Louise H, Müller, Nicola F, Neher, Richard A, Deng, Xianding, Gu, Wei, Federman, Scot, Chiu, Charles, Duchin, Jeffrey S, Gautom, Romesh, Melly, Geoff, Hiatt, Brian, Dykema, Philip, Lindquist, Scott, Queen, Krista, Tao, Ying, Uehara, Anna, Tong, Suxiang, MacCannell, Duncan, Armstrong, Gregory L, Baird, Geoffrey S, Chu, Helen Y, Shendure, Jay, Jerome, Keith R
Published in Science (30.10.2020)
Published in Science (30.10.2020)
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Comparison of Symptoms and RNA Levels in Children and Adults With SARS-CoV-2 Infection in the Community Setting
Chung, Erin, Chow, Eric J, Wilcox, Naomi C, Burstein, Roy, Brandstetter, Elisabeth, Han, Peter D, Fay, Kairsten, Pfau, Brian, Adler, Amanda, Lacombe, Kirsten, Lockwood, Christina M, Uyeki, Timothy M, Shendure, Jay, Duchin, Jeffrey S, Rieder, Mark J, Nickerson, Deborah A, Boeckh, Michael, Famulare, Michael, Hughes, James P, Starita, Lea M, Bedford, Trevor, Englund, Janet A, Chu, Helen Y
Published in JAMA pediatrics (01.10.2021)
Published in JAMA pediatrics (01.10.2021)
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Risk of Subsequent Respiratory Virus Detection After Primary Virus Detection in a Community Household Study—King County, Washington, 2019–2021
Heimonen, Jessica, Chow, Eric J, Wang, Yongzhe, Hughes, James P, Rogers, Julia, Emanuels, Anne, O’Hanlon, Jessica, Han, Peter D, Wolf, Caitlin R, Logue, Jennifer K, Ogokeh, Constance E, Rolfes, Melissa A, Uyeki, Timothy M, Starita, Lea, Englund, Janet A, Chu, Helen Y
Published in The Journal of infectious diseases (14.02.2024)
Published in The Journal of infectious diseases (14.02.2024)
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