The effect of SARS-CoV-2 vaccination on post-acute sequelae of COVID-19 (PASC): A prospective cohort study
Wynberg, Elke, Han, Alvin X., Boyd, Anders, van Willigen, Hugo D.G., Verveen, Anouk, Lebbink, Romy, van der Straten, Karlijn, Kootstra, Neeltje, van Gils, Marit J., Russell, Colin, Leenstra, Tjalling, de Jong, Menno D., de Bree, Godelieve J., Prins, Maria
Published in Vaccine (30.07.2022)
Published in Vaccine (30.07.2022)
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Antigenic cartography using sera from sequence-confirmed SARS-CoV-2 variants of concern infections reveals antigenic divergence of Omicron
van der Straten, Karlijn, Guerra, Denise, van Gils, Marit J., Bontjer, Ilja, Caniels, Tom G., van Willigen, Hugo D.G., Wynberg, Elke, Poniman, Meliawati, Burger, Judith A., Bouhuijs, Joey H., van Rijswijk, Jacqueline, Olijhoek, Wouter, Liesdek, Marinus H., Lavell, A.H. Ayesha, Appelman, Brent, Sikkens, Jonne J., Bomers, Marije K., Han, Alvin X., Nichols, Brooke E., Prins, Maria, Vennema, Harry, Reusken, Chantal, de Jong, Menno D., de Bree, Godelieve J., Russell, Colin A., Eggink, Dirk, Sanders, Rogier W.
Published in Immunity (13.09.2022)
Published in Immunity (13.09.2022)
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An epidemiological surveillance of hand foot and mouth disease in paediatric patients and in community: A Singapore retrospective cohort study, 2013-2018
Min, Nyo, Ong, Yasmin Hui Binn, Han, Alvin X, Ho, Si Xian, Yen, Emmerie Wong Phaik, Ban, Kenneth Hon Kim, Maurer-Stroh, Sebastian, Chong, Chia Yin, Chu, Justin Jang Hann
Published in PLoS neglected tropical diseases (10.02.2021)
Published in PLoS neglected tropical diseases (10.02.2021)
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Incomplete genetic reconstitution of B cell pools contributes to prolonged immunosuppression after measles
Petrova, Velislava N, Sawatsky, Bevan, Han, Alvin X, Laksono, Brigitta M, Walz, Lisa, Parker, Edyth, Pieper, Kathrin, Anderson, Carl A, de Vries, Rory D, Lanzavecchia, Antonio, Kellam, Paul, von Messling, Veronika, de Swart, Rik L, Russell, Colin A
Published in Science immunology (01.11.2019)
Published in Science immunology (01.11.2019)
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Inflammatory profiles are associated with long COVID up to 6 months after COVID-19 onset: A prospective cohort study of individuals with mild to critical COVID-19
Wynberg, Elke, Han, Alvin X, van Willigen, Hugo D G, Verveen, Anouk, van Pul, Lisa, Maurer, Irma, van Leeuwen, Ester M, van den Aardweg, Joost G, de Jong, Menno D, Nieuwkerk, Pythia, Prins, Maria, Kootstra, Neeltje A, de Bree, Godelieve J
Published in PloS one (15.07.2024)
Published in PloS one (15.07.2024)
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Regional connectivity drove bidirectional transmission of SARS-CoV-2 in the Middle East during travel restrictions
Parker, Edyth, Anderson, Catelyn, Zeller, Mark, Tibi, Ahmad, Havens, Jennifer L., Laroche, Geneviève, Benlarbi, Mehdi, Ariana, Ardeshir, Robles-Sikisaka, Refugio, Latif, Alaa Abdel, Watts, Alexander, Awidi, Abdalla, Jaradat, Saied A., Gangavarapu, Karthik, Ramesh, Karthik, Kurzban, Ezra, Matteson, Nathaniel L., Han, Alvin X., Hughes, Laura D., McGraw, Michelle, Spencer, Emily, Nicholson, Laura, Khan, Kamran, Suchard, Marc A., Wertheim, Joel O., Wohl, Shirlee, Côté, Marceline, Abdelnour, Amid, Andersen, Kristian G., Abu-Dayyeh, Issa
Published in Nature communications (15.08.2022)
Published in Nature communications (15.08.2022)
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Determinants of epidemic size and the impacts of lulls in seasonal influenza virus circulation
de Jong, Simon P. J., Felix Garza, Zandra C., Gibson, Joseph C., van Leeuwen, Sarah, de Vries, Robert P., Boons, Geert-Jan, van Hoesel, Marliek, de Haan, Karen, van Groeningen, Laura E., Hulme, Katina D., van Willigen, Hugo D. G., Wynberg, Elke, de Bree, Godelieve J., Matser, Amy, Bakker, Margreet, van der Hoek, Lia, Prins, Maria, Kootstra, Neeltje A., Eggink, Dirk, Nichols, Brooke E., Han, Alvin X., de Jong, Menno D., Russell, Colin A.
Published in Nature communications (18.01.2024)
Published in Nature communications (18.01.2024)
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Epidemiologic and Genomic Analysis of SARS-CoV-2 Delta Variant Superspreading Event in Nightclub, the Netherlands, June 2021
Koopsen, Jelle, van Ewijk, Catharina E, Bavalia, Roisin, Cornelissen, Akke, Bruisten, Sylvia M, de Gee, Floor, Han, Alvin X, de Jong, Maarten, de Jong, Menno D, Jonges, Marcel, Khawaja, Norin, Koene, Fleur M H P A, van der Lubben, Mariken, Mikulic, Iris, Rebers, Sjoerd P H, Russell, Colin A, Schinkel, Janke, Schreijer, Anja J M, den Uil, Judith A, Welkers, Matthijs R A, Leenstra, Tjalling
Published in Emerging infectious diseases (01.05.2022)
Published in Emerging infectious diseases (01.05.2022)
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Regional importation and asymmetric within-country spread of SARS-CoV-2 variants of concern in the Netherlands
Han, Alvin X, Kozanli, Eva, Koopsen, Jelle, Vennema, Harry, Hajji, Karim, Kroneman, Annelies, van Walle, Ivo, Klinkenberg, Don, Wallinga, Jacco, Russell, Colin A, Eggink, Dirk, Reusken, Chantal
Published in eLife (13.09.2022)
Published in eLife (13.09.2022)
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Impact and cost-effectiveness of SARS-CoV-2 self-testing strategies in schools: a multicountry modelling analysis
Chevalier, Joshua M, Han, Alvin X, Hansen, Megan A, Klock, Ethan, Pandithakoralage, Hiromi, Ockhuisen, Tom, Girdwood, Sarah J, Lekodeba, Nkgomeleng A, de Nooy, Alexandra, Khan, Shaukat, Johnson, Cheryl C, Sacks, Jilian A, Jenkins, Helen E, Russell, Colin A, Nichols, Brooke E
Published in BMJ open (27.02.2024)
Published in BMJ open (27.02.2024)
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High frequency and diversity of parechovirus A in a cohort of Malawian children
Brouwer, Lieke, Karelehto, Eveliina, Han, Alvin X., Thomas, Xiomara V., Bruning, Andrea H. L., Calis, Job C. J., van Hensbroek, Michaël Boele, Westerhuis, Brenda M., Amarthalingam, Darsha, Koekkoek, Sylvie M., Rebers, Sjoerd P. H., Phiri, Kamija S., Wolthers, Katja C., Pajkrt, Dasja
Published in Archives of virology (01.03.2019)
Published in Archives of virology (01.03.2019)
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Genetic diversity and host adaptation of avian H5N1 influenza viruses during human infection
Welkers, Matthijs R.A., Pawestri, Hana A., Fonville, Judy M., Sampurno, Ondri D., Pater, Maarten, Holwerda, Melle, Han, Alvin X., Russell, Colin A., Jeeninga, Rienk E., Setiawaty, Vivi, de Jong, Menno D., Eggink, Dirk
Published in Emerging microbes & infections (01.01.2019)
Published in Emerging microbes & infections (01.01.2019)
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Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
Han, Alvin X, Parker, Edyth, Scholer, Frits, Maurer-Stroh, Sebastian, Russell, Colin A
Published in Molecular biology and evolution (01.07.2019)
Published in Molecular biology and evolution (01.07.2019)
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Quantifying the molecular origins of opposite solvent effects on protein-protein interactions
Vagenende, Vincent, Han, Alvin X, Pek, Han B, Loo, Bernard L W
Published in PLoS computational biology (01.05.2013)
Published in PLoS computational biology (01.05.2013)
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Co-evolution of immunity and seasonal influenza viruses
Han, Alvin X., de Jong, Simon P. J., Russell, Colin A.
Published in Nature reviews. Microbiology (01.12.2023)
Published in Nature reviews. Microbiology (01.12.2023)
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Strategies for Using Antigen Rapid Diagnostic Tests to Reduce Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in Low- and Middle-Income Countries: A Mathematical Modelling Study Applied to Zambia
Han, Alvin X, Girdwood, Sarah J, Khan, Shaukat, Sacks, Jilian A, Toporowski, Amy, Huq, Naushin, Hannay, Emma, Russell, Colin A, Nichols, Brooke E
Published in Clinical infectious diseases (18.02.2023)
Published in Clinical infectious diseases (18.02.2023)
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Hepatitis C Virus Transmission Among Men Who Have Sex With Men in Amsterdam: External Introductions May Complicate Microelimination Efforts
Koopsen, Jelle, Parker, Edyth, Han, Alvin X, van de Laar, Thijs, Russell, Colin, Hoornenborg, Elske, Prins, Maria, van der Valk, Marc, Schinkel, Janke
Published in Clinical infectious diseases (15.06.2021)
Published in Clinical infectious diseases (15.06.2021)
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SARS-CoV-2 diagnostic testing rates determine the sensitivity of genomic surveillance programs
Han, Alvin X., Toporowski, Amy, Sacks, Jilian A., Perkins, Mark D., Briand, Sylvie, van Kerkhove, Maria, Hannay, Emma, Carmona, Sergio, Rodriguez, Bill, Parker, Edyth, Nichols, Brooke E., Russell, Colin A.
Published in Nature genetics (01.01.2023)
Published in Nature genetics (01.01.2023)
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