Chromatin remodeling in bovine embryos indicates species-specific regulation of genome activation
Halstead, Michelle M., Ma, Xin, Zhou, Chuan, Schultz, Richard M., Ross, Pablo J.
Published in Nature communications (17.09.2020)
Published in Nature communications (17.09.2020)
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Journal Article
A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues
Halstead, Michelle M, Kern, Colin, Saelao, Perot, Wang, Ying, Chanthavixay, Ganrea, Medrano, Juan F, Van Eenennaam, Alison L, Korf, Ian, Tuggle, Christopher K, Ernst, Catherine W, Zhou, Huaijun, Ross, Pablo J
Published in BMC genomics (07.10.2020)
Published in BMC genomics (07.10.2020)
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Journal Article
Large-Scale Multiplexing Permits Full-Length Transcriptome Annotation of 32 Bovine Tissues From a Single Nanopore Flow Cell
Halstead, Michelle M., Islas-Trejo, Alma, Goszczynski, Daniel E., Medrano, Juan F., Zhou, Huaijun, Ross, Pablo J.
Published in Frontiers in genetics (20.05.2021)
Published in Frontiers in genetics (20.05.2021)
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Journal Article
Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing
Guan, Dailu, Halstead, Michelle M., Islas-Trejo, Alma D., Goszczynski, Daniel E., Cheng, Hans H., Ross, Pablo J., Zhou, Huaijun
Published in Frontiers in genetics (03.10.2022)
Published in Frontiers in genetics (03.10.2022)
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Journal Article
Histone remodeling reflects conserved mechanisms of bovine and human preimplantation development
Zhou, Chuan, Halstead, Michelle M, Bonnet‐Garnier, Amélie, Schultz, Richard M, Ross, Pablo J
Published in EMBO reports (06.03.2023)
Published in EMBO reports (06.03.2023)
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Journal Article
Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage
Goszczynski, Daniel E, Halstead, Michelle M, Islas-Trejo, Alma D, Zhou, Huaijun, Ross, Pablo J
Published in Genome research (01.04.2021)
Published in Genome research (01.04.2021)
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Journal Article
Transcriptome annotation of 17 porcine tissues using nanopore sequencing technology
Li, Jinghui, Guan, Dailu, Halstead, Michelle M., Islas‐Trejo, Alma D., Goszczynski, Daniel E., Ernst, Catherine W., Cheng, Hao, Ross, Pablo, Zhou, Huaijun
Published in Animal genetics (01.02.2023)
Published in Animal genetics (01.02.2023)
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Journal Article
Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions
Salavati, Mazdak, Woolley, Shernae A, Cortés Araya, Yennifer, Halstead, Michelle M, Stenhouse, Claire, Johnsson, Martin, Ashworth, Cheryl J, Archibald, Alan L, Donadeu, Francesc X, Hassan, Musa A, Clark, Emily L
Published in G3 : genes - genomes - genetics (04.02.2022)
Published in G3 : genes - genomes - genetics (04.02.2022)
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Journal Article
Salmonella enterica Serovars Enteritidis Infection Alters the Indigenous Microbiota Diversity in Young Layer Chicks
Mon, Khin K Z, Saelao, Perot, Halstead, Michelle M, Chanthavixay, Ganrea, Chang, Huai-Chen, Garas, Lydia, Maga, Elizabeth A, Zhou, Huaijun
Published in Frontiers in veterinary science (23.11.2015)
Published in Frontiers in veterinary science (23.11.2015)
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Journal Article
An atlas of regulatory elements in chicken: A resource for chicken genetics and genomics
Pan, Zhangyuan, Wang, Ying, Wang, Mingshan, Wang, Yuzhe, Zhu, Xiaoning, Gu, Shenwen, Zhong, Conghao, An, Liqi, Shan, Mingzhu, Damas, Joana, Halstead, Michelle M, Guan, Dailu, Trakooljul, Nares, Wimmers, Klaus, Bi, Ye, Wu, Shang, Delany, Mary E, Bai, Xuechen, Cheng, Hans H, Sun, Congjiao, Yang, Ning, Hu, Xiaoxiang, Lewin, Harris A, Fang, Lingzhao, Zhou, Huaijun
Published in Science advances (03.05.2023)
Published in Science advances (03.05.2023)
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Journal Article
Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions
Salavati, Mazdak, Woolley, Shernae A, Yennifer Cortes Araya, Halstead, Michelle M, Stenhouse, Claire, Johnsson, Martin, Ashworth, Cheryl J, Archibald, Alan L, Donadeu, Francesc X, Hassan, Musa A, Clark, Emily Louise
Published in bioRxiv (18.08.2021)
Published in bioRxiv (18.08.2021)
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Paper
A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues
Halstead, Michelle M, Kern, Colin, Perot Saelao, Wang, Ying, Chanthavixay, Ganrea, Medrano, Juan F, Van Eenennaam, Alison L, Korf, Ian, Tuggle, Christopher K, Ernst, Catherine W, Zhou, Huaijun, Ross, Pablo J
Published in bioRxiv (14.08.2020)
Published in bioRxiv (14.08.2020)
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