Evolution of virulence in Enterococcus faecium, a hospital-adapted opportunistic pathogen
Gao, Wei, Howden, Benjamin P, Stinear, Timothy P
Published in Current opinion in microbiology (01.02.2018)
Published in Current opinion in microbiology (01.02.2018)
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Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenes
Kwong, Jason C, Mercoulia, Karolina, Tomita, Takehiro, Easton, Marion, Li, Hua Y, Bulach, Dieter M, Stinear, Timothy P, Seemann, Torsten, Howden, Benjamin P
Published in Journal of clinical microbiology (01.02.2016)
Published in Journal of clinical microbiology (01.02.2016)
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Tracking the COVID-19 pandemic in Australia using genomics
Seemann, Torsten, Lane, Courtney R, Sherry, Norelle L, Duchene, Sebastian, Gonçalves da Silva, Anders, Caly, Leon, Sait, Michelle, Ballard, Susan A, Horan, Kristy, Schultz, Mark B, Hoang, Tuyet, Easton, Marion, Dougall, Sally, Stinear, Timothy P, Druce, Julian, Catton, Mike, Sutton, Brett, van Diemen, Annaliese, Alpren, Charles, Williamson, Deborah A, Howden, Benjamin P
Published in Nature communications (01.09.2020)
Published in Nature communications (01.09.2020)
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Reduced Vancomycin Susceptibility in Staphylococcus aureus, Including Vancomycin-Intermediate and Heterogeneous Vancomycin-Intermediate Strains: Resistance Mechanisms, Laboratory Detection, and Clinical Implications
HOWDEN, Benjamin P, DAVIES, John K, JOHNSON, Paul D. R, STINEAR, Timothy P, LINDSAY GRAYSON, M
Published in Clinical Microbiology Reviews (01.01.2010)
Published in Clinical Microbiology Reviews (01.01.2010)
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Evaluation of Serological Tests for SARS-CoV-2: Implications for Serology Testing in a Low-Prevalence Setting
Bond, Katherine, Nicholson, Suellen, Lim, Seok Ming, Karapanagiotidis, Theo, Williams, Eloise, Johnson, Douglas, Hoang, Tuyet, Sia, Cheryll, Purcell, Damian, Mordant, Francesca, Lewin, Sharon R, Catton, Mike, Subbarao, Kanta, Howden, Benjamin P, Williamson, Deborah A
Published in The Journal of Infectious Diseases (15.10.2020)
Published in The Journal of Infectious Diseases (15.10.2020)
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New rules for genomics-informed COVID-19 responses–Lessons learned from the first waves of the Omicron variant in Australia
Porter, Ashleigh F, Sherry, Norelle, Andersson, Patiyan, Johnson, Sandra A, Duchene, Sebastian, Howden, Benjamin P
Published in PLoS genetics (13.10.2022)
Published in PLoS genetics (13.10.2022)
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An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance
Sherry, Norelle L, Horan, Kristy A, Ballard, Susan A, Gonҫalves da Silva, Anders, Gorrie, Claire L, Schultz, Mark B, Stevens, Kerrie, Valcanis, Mary, Sait, Michelle L, Stinear, Timothy P, Howden, Benjamin P, Seemann, Torsten
Published in Nature communications (04.01.2023)
Published in Nature communications (04.01.2023)
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Evolution of multidrug resistance during Staphylococcus aureus infection involves mutation of the essential two component regulator WalKR
Howden, Benjamin P, McEvoy, Christopher R E, Allen, David L, Chua, Kyra, Gao, Wei, Harrison, Paul F, Bell, Jan, Coombs, Geoffrey, Bennett-Wood, Vicki, Porter, Jessica L, Robins-Browne, Roy, Davies, John K, Seemann, Torsten, Stinear, Timothy P
Published in PLoS pathogens (01.11.2011)
Published in PLoS pathogens (01.11.2011)
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Complete Bypass of Restriction Systems for Major Staphylococcus aureus Lineages
Monk, Ian R, Tree, Jai J, Howden, Benjamin P, Stinear, Timothy P, Foster, Timothy J
Published in mBio (26.05.2015)
Published in mBio (26.05.2015)
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The evolution of vancomycin intermediate Staphylococcus aureus (VISA) and heterogenous-VISA
Howden, Benjamin P., Peleg, Anton Y., Stinear, Timothy P.
Published in Infection, genetics and evolution (01.01.2014)
Published in Infection, genetics and evolution (01.01.2014)
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RNase III-CLASH of multi-drug resistant Staphylococcus aureus reveals a regulatory mRNA 3′UTR required for intermediate vancomycin resistance
Mediati, Daniel G., Wong, Julia L., Gao, Wei, McKellar, Stuart, Pang, Chi Nam Ignatius, Wu, Sylvania, Wu, Winton, Sy, Brandon, Monk, Ian R., Biazik, Joanna M., Wilkins, Marc R., Howden, Benjamin P., Stinear, Timothy P., Granneman, Sander, Tree, Jai J.
Published in Nature communications (22.06.2022)
Published in Nature communications (22.06.2022)
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Evolutionary dynamics of multidrug resistant Salmonella enterica serovar 4,[5],12:i:- in Australia
Ingle, Danielle J, Ambrose, Rebecca L, Baines, Sarah L, Duchene, Sebastian, Gonçalves da Silva, Anders, Lee, Darren Y J, Jones, Miriam, Valcanis, Mary, Taiaroa, George, Ballard, Susan A, Kirk, Martyn D, Howden, Benjamin P, Pearson, Jaclyn S, Williamson, Deborah A
Published in Nature communications (09.08.2021)
Published in Nature communications (09.08.2021)
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Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings
Higgs, Charlie, Sherry, Norelle L, Seemann, Torsten, Horan, Kristy, Walpola, Hasini, Kinsella, Paul, Bond, Katherine, Williamson, Deborah A, Marshall, Caroline, Kwong, Jason C, Grayson, M Lindsay, Stinear, Timothy P, Gorrie, Claire L, Howden, Benjamin P
Published in Nature communications (26.01.2022)
Published in Nature communications (26.01.2022)
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Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis
Lee, Jean Y H, Monk, Ian R, Gonçalves da Silva, Anders, Seemann, Torsten, Chua, Kyra Y L, Kearns, Angela, Hill, Robert, Woodford, Neil, Bartels, Mette D, Strommenger, Birgit, Laurent, Frederic, Dodémont, Magali, Deplano, Ariane, Patel, Robin, Larsen, Anders R, Korman, Tony M, Stinear, Timothy P, Howden, Benjamin P
Published in Nature microbiology (01.10.2018)
Published in Nature microbiology (01.10.2018)
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Detection of SARS-CoV-2 in saliva: implications for specimen transport and storage
Williams, Eloise, Isles, Nicole, Chong, Brian, Bond, Katherine, Yoga, Yano, Druce, Julian, Catton, Mike, Ballard, Susan A, Howden, Benjamin P, Williamson, Deborah A
Published in Journal of medical microbiology (01.02.2021)
Published in Journal of medical microbiology (01.02.2021)
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Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19
Stockdale, Jessica E, Susvitasari, Kurnia, Tupper, Paul, Sobkowiak, Benjamin, Mulberry, Nicola, Gonçalves da Silva, Anders, Watt, Anne E, Sherry, Norelle L, Minko, Corinna, Howden, Benjamin P, Lane, Courtney R, Colijn, Caroline
Published in Nature communications (10.08.2023)
Published in Nature communications (10.08.2023)
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Key Challenges for Respiratory Virus Surveillance while Transitioning out of Acute Phase of COVID-19 Pandemic
Eales, Oliver, Plank, Michael J, Cowling, Benjamin J, Howden, Benjamin P, Kucharski, Adam J, Sullivan, Sheena G, Vandemaele, Katelijn, Viboud, Cecile, Riley, Steven, McCaw, James M, Shearer, Freya M
Published in Emerging infectious diseases (01.02.2024)
Published in Emerging infectious diseases (01.02.2024)
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Vancomycin AUC/MIC Ratio and 30-Day Mortality in Patients with Staphylococcus aureus Bacteremia
HOLMES, Natasha E, TURNIDGE, John D, HOWDEN, Benjamin P, JOHNSON, Paul D. R, MUNCKHOF, Wendy J, ROBINSON, J. Owen, KORMAN, Tony M, O'SULLIVAN, Matthew V. N, ANDERSON, Tara L, ROBERTS, Sally A, WARREN, Sanchia J. C, WEI GAO
Published in Antimicrobial Agents and Chemotherapy (01.04.2013)
Published in Antimicrobial Agents and Chemotherapy (01.04.2013)
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