PRSet: Pathway-based polygenic risk score analyses and software
Choi, Shing Wan, García-González, Judit, Ruan, Yunfeng, Wu, Hei Man, Porras, Christian, Johnson, Jessica, Hoggart, Clive J, O'Reilly, Paul F
Published in PLoS genetics (07.02.2023)
Published in PLoS genetics (07.02.2023)
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Portability of 245 polygenic scores when derived from the UK Biobank and applied to 9 ancestry groups from the same cohort
Privé, Florian, Aschard, Hugues, Carmi, Shai, Folkersen, Lasse, Hoggart, Clive, O’Reilly, Paul F., Vilhjálmsson, Bjarni J.
Published in American journal of human genetics (06.01.2022)
Published in American journal of human genetics (06.01.2022)
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MultiPhen: joint model of multiple phenotypes can increase discovery in GWAS
O'Reilly, Paul F, Hoggart, Clive J, Pomyen, Yotsawat, Calboli, Federico C F, Elliott, Paul, Jarvelin, Marjo-Riitta, Coin, Lachlan J M
Published in PloS one (02.05.2012)
Published in PloS one (02.05.2012)
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Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies
Hoggart, Clive J, Whittaker, John C, De Iorio, Maria, Balding, David J
Published in PLoS genetics (01.07.2008)
Published in PLoS genetics (01.07.2008)
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Massively parallel reporter assays of melanoma risk variants identify MX2 as a gene promoting melanoma
Choi, Jiyeon, Zhang, Tongwu, Vu, Andrew, Ablain, Julien, Makowski, Matthew M., Colli, Leandro M., Xu, Mai, Hennessey, Rebecca C., Yin, Jinhu, Rothschild, Harriet, Gräwe, Cathrin, Kovacs, Michael A., Funderburk, Karen M., Brossard, Myriam, Taylor, John, Pasaniuc, Bogdan, Chari, Raj, Chanock, Stephen J., Hoggart, Clive J., Demenais, Florence, Barrett, Jennifer H., Law, Matthew H., Iles, Mark M., Yu, Kai, Vermeulen, Michiel, Zon, Leonard I., Brown, Kevin M.
Published in Nature communications (01.06.2020)
Published in Nature communications (01.06.2020)
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Predicting IVIG resistance in UK Kawasaki disease
Davies, Sarah, Sutton, Natalina, Blackstock, Sarah, Gormley, Stuart, Hoggart, Clive J, Levin, Michael, Herberg, Jethro A
Published in Archives of disease in childhood (01.04.2015)
Published in Archives of disease in childhood (01.04.2015)
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Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children
Herberg, Jethro A, Kaforou, Myrsini, Wright, Victoria J, Shailes, Hannah, Eleftherohorinou, Hariklia, Hoggart, Clive J, Cebey-López, Miriam, Carter, Michael J, Janes, Victoria A, Gormley, Stuart, Shimizu, Chisato, Tremoulet, Adriana H, Barendregt, Anouk M, Salas, Antonio, Kanegaye, John, Pollard, Andrew J, Faust, Saul N, Patel, Sanjay, Kuijpers, Taco, Martinón-Torres, Federico, Burns, Jane C, Coin, Lachlan J. M, Levin, Michael
Published in JAMA : the journal of the American Medical Association (23.08.2016)
Published in JAMA : the journal of the American Medical Association (23.08.2016)
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Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature
Wright, Victoria J, Herberg, Jethro A, Kaforou, Myrsini, Shimizu, Chisato, Eleftherohorinou, Hariklia, Shailes, Hannah, Barendregt, Anouk M, Menikou, Stephanie, Gormley, Stuart, Berk, Maurice, Hoang, Long Truong, Tremoulet, Adriana H, Kanegaye, John T, Coin, Lachlan J M, Glodé, Mary P, Hibberd, Martin, Kuijpers, Taco W, Hoggart, Clive J, Burns, Jane C, Levin, Michael
Published in JAMA pediatrics (01.10.2018)
Published in JAMA pediatrics (01.10.2018)
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npInv: accurate detection and genotyping of inversions using long read sub-alignment
Shao, Haojing, Ganesamoorthy, Devika, Duarte, Tania, Cao, Minh Duc, Hoggart, Clive J, Coin, Lachlan J M
Published in BMC bioinformatics (13.07.2018)
Published in BMC bioinformatics (13.07.2018)
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Journal Article
Effects of saline or albumin fluid bolus in resuscitation: evidence from re-analysis of the FEAST trial
Levin, Michael, Cunnington, Aubrey J, Wilson, Clare, Nadel, Simon, Lang, Hans Joerg, Ninis, Nelly, McCulloch, Mignon, Argent, Andrew, Buys, Heloise, Moxon, Christopher A, Best, Abigail, Nijman, Ruud G, Hoggart, Clive J
Published in The lancet respiratory medicine (01.07.2019)
Published in The lancet respiratory medicine (01.07.2019)
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EraSOR: a software tool to eliminate inflation caused by sample overlap in polygenic score analyses
Choi, Shing Wan, Mak, Timothy Shin Heng, Hoggart, Clive J, O'Reilly, Paul F
Published in Gigascience (28.12.2022)
Published in Gigascience (28.12.2022)
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Journal Article
Portability of 245 polygenic scores when derived from the UK Biobank and applied to 9 ancestry groups from the same cohort
Privé, Florian, Aschard, Hugues, Carmi, Shai, Folkersen, Lasse, Hoggart, Clive, O’Reilly, Paul F., Vilhjálmsson, Bjarni J.
Published in American journal of human genetics (03.02.2022)
Published in American journal of human genetics (03.02.2022)
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Journal Article
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population
Jones, Chris G, Peltonen, Leena, Ripatti, Samuli, Sovio, Ulla, Gabriel, Stacey, Kaakinen, Marika, Varilo, Teppo, Pouta, Anneli, Freimer, Nelson B, Brodsky, Jae, Turunen, Hannu, Hartikainen, Anna-Liisa, Hoggart, Clive, Ruokonen, Aimo, Coin, Lachlan, Service, Susan K, Elliot, Paul, Collins, Andrew, McCarthy, Mark I, Daly, Mark J, Zaitlen, Noah A, Jakkula, Eveliina, Sabatti, Chiara, Järvelin, Marjo-Riitta, Laitinen, Jaana
Published in Nature genetics (01.01.2009)
Published in Nature genetics (01.01.2009)
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Journal Article
Evaluation of Host Serum Protein Biomarkers of Tuberculosis in sub-Saharan Africa
Morris, Thomas C, Hoggart, Clive J, Chegou, Novel N, Kidd, Martin, Oni, Tolu, Goliath, Rene, Wilkinson, Katalin A, Dockrell, Hazel M, Sichali, Lifted, Banda, Louis, Crampin, Amelia C, French, Neil, Walzl, Gerhard, Levin, Michael, Wilkinson, Robert J, Hamilton, Melissa S
Published in Frontiers in immunology (25.02.2021)
Published in Frontiers in immunology (25.02.2021)
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Bridging a diagnostic Kawasaki disease classifier from a microarray platform to a qRT-PCR assay
Kuiper, Rowan, Wright, Victoria J., Habgood-Coote, Dominic, Shimizu, Chisato, Huigh, Daphne, Tremoulet, Adriana H., van Keulen, Danielle, Hoggart, Clive J., Rodriguez-Manzano, Jesus, Herberg, Jethro A., Kaforou, Myrsini, Tempel, Dennie, Burns, Jane C., Levin, Michael
Published in Pediatric research (01.02.2023)
Published in Pediatric research (01.02.2023)
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Journal Article
Secondary re-analysis of the FEAST trial - Authors' reply
Levin, Michael, Cunnington, Aubrey J, Hoggart, Clive J
Published in The lancet respiratory medicine (01.10.2019)
Published in The lancet respiratory medicine (01.10.2019)
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Journal Article
Identification of novel locus associated with coronary artery aneurysms and validation of loci for susceptibility to Kawasaki disease
Hoggart, Clive, Shimizu, Chisato, Galassini, Rachel, Wright, Victoria J, Shailes, Hannah, Bellos, Evan, Herberg, Jethro A, Pollard, Andrew J, O'Connor, Daniel, Choi, Shing Wan, Seaby, Eleanor G, Menikou, Stephanie, Hibberd, Martin, Sallah, Neneh, Burgner, David, Brogan, Paul, Patel, Harsita, Kim, Jihoon, Tremoulet, Adriana H, Salo, Eeva, van Stijn, Diana, Kuijpers, Taco, Burns, Jane C, Levin, Michael
Published in European journal of human genetics : EJHG (01.12.2021)
Published in European journal of human genetics : EJHG (01.12.2021)
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Journal Article
Genome-wide significance for dense SNP and resequencing data
Hoggart, Clive J., Clark, Taane G., De Iorio, Maria, Whittaker, John C., Balding, David J.
Published in Genetic epidemiology (01.02.2008)
Published in Genetic epidemiology (01.02.2008)
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