Long-read metagenomics using PromethION uncovers oral bacteriophages and their interaction with host bacteria
Yahara, Koji, Suzuki, Masato, Hirabayashi, Aki, Suda, Wataru, Hattori, Masahira, Suzuki, Yutaka, Okazaki, Yusuke
Published in Nature communications (04.01.2021)
Published in Nature communications (04.01.2021)
Get full text
Journal Article
The gut microbiome of healthy Japanese and its microbial and functional uniqueness
Nishijima, Suguru, Suda, Wataru, Oshima, Kenshiro, Kim, Seok-Won, Hirose, Yuu, Morita, Hidetoshi, Hattori, Masahira
Published in DNA research (01.04.2016)
Published in DNA research (01.04.2016)
Get full text
Journal Article
Gut microorganisms act together to exacerbate inflammation in spinal cords
Miyauchi, Eiji, Kim, Seok-Won, Suda, Wataru, Kawasumi, Masami, Onawa, Satoshi, Taguchi-Atarashi, Naoko, Morita, Hidetoshi, Taylor, Todd D., Hattori, Masahira, Ohno, Hiroshi
Published in Nature (London) (03.09.2020)
Published in Nature (London) (03.09.2020)
Get full text
Journal Article
Dysbiosis in the Gut Microbiota of Patients with Multiple Sclerosis, with a Striking Depletion of Species Belonging to Clostridia XIVa and IV Clusters
Miyake, Sachiko, Kim, Sangwan, Suda, Wataru, Oshima, Kenshiro, Nakamura, Masakazu, Matsuoka, Takako, Chihara, Norio, Tomita, Atsuko, Sato, Wakiro, Kim, Seok-Won, Morita, Hidetoshi, Hattori, Masahira, Yamamura, Takashi
Published in PloS one (14.09.2015)
Published in PloS one (14.09.2015)
Get full text
Journal Article
Obesity-induced gut microbial metabolite promotes liver cancer through senescence secretome
Yoshimoto, Shin, Loo, Tze Mun, Atarashi, Koji, Kanda, Hiroaki, Sato, Seidai, Oyadomari, Seiichi, Iwakura, Yoichiro, Oshima, Kenshiro, Morita, Hidetoshi, Hattori, Masahira, Honda, Kenya, Ishikawa, Yuichi, Hara, Eiji, Ohtani, Naoko
Published in Nature (London) (04.07.2013)
Published in Nature (London) (04.07.2013)
Get full text
Journal Article
Optimization of Data-Independent Acquisition Mass Spectrometry for Deep and Highly Sensitive Proteomic Analysis
Kawashima, Yusuke, Watanabe, Eiichiro, Umeyama, Taichi, Nakajima, Daisuke, Hattori, Masahira, Honda, Kenya, Ohara, Osamu
Published in International journal of molecular sciences (26.11.2019)
Published in International journal of molecular sciences (26.11.2019)
Get full text
Journal Article
Alterations of the gut ecological and functional microenvironment in different stages of multiple sclerosis
Takewaki, Daiki, Suda, Wataru, Sato, Wakiro, Takayasu, Lena, Kumar, Naveen, Kimura, Kimitoshi, Kaga, Naoko, Mizuno, Toshiki, Miyake, Sachiko, Hattori, Masahira, Yamamura, Takashi
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (08.09.2020)
Get full text
Journal Article
Small genome symbiont underlies cuticle hardness in beetles
Anbutsu, Hisashi, Moriyama, Minoru, Nikoh, Naruo, Hosokawa, Takahiro, Futahashi, Ryo, Tanahashi, Masahiko, Meng, Xian-Ying, Kuriwada, Takashi, Mori, Naoki, Oshima, Kenshiro, Hattori, Masahira, Fujie, Manabu, Satoh, Noriyuki, Maeda, Taro, Shigenobu, Shuji, Koga, Ryuichi, Fukatsu, Takema
Published in Proceedings of the National Academy of Sciences - PNAS (03.10.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (03.10.2017)
Get full text
Journal Article
Novel bile acid biosynthetic pathways are enriched in the microbiome of centenarians
Sato, Yuko, Atarashi, Koji, Plichta, Damian R., Arai, Yasumichi, Sasajima, Satoshi, Kearney, Sean M., Suda, Wataru, Takeshita, Kozue, Sasaki, Takahiro, Okamoto, Shoki, Skelly, Ashwin N., Okamura, Yuki, Vlamakis, Hera, Li, Youxian, Tanoue, Takeshi, Takei, Hajime, Nittono, Hiroshi, Narushima, Seiko, Irie, Junichiro, Itoh, Hiroshi, Moriya, Kyoji, Sugiura, Yuki, Suematsu, Makoto, Moritoki, Nobuko, Shibata, Shinsuke, Littman, Dan R., Fischbach, Michael A., Uwamino, Yoshifumi, Inoue, Takashi, Honda, Akira, Hattori, Masahira, Murai, Tsuyoshi, Xavier, Ramnik J., Hirose, Nobuyoshi, Honda, Kenya
Published in Nature (London) (18.11.2021)
Published in Nature (London) (18.11.2021)
Get full text
Journal Article
A proliferative probiotic Bifidobacterium strain in the gut ameliorates progression of metabolic disorders via microbiota modulation and acetate elevation
Aoki, Ryo, Kamikado, Kohei, Suda, Wataru, Takii, Hiroshi, Mikami, Yumiko, Suganuma, Natsuki, Hattori, Masahira, Koga, Yasuhiro
Published in Scientific reports (02.03.2017)
Published in Scientific reports (02.03.2017)
Get full text
Journal Article
Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation
Atarashi, Koji, Suda, Wataru, Luo, Chengwei, Kawaguchi, Takaaki, Motoo, Iori, Narushima, Seiko, Kiguchi, Yuya, Yasuma, Keiko, Watanabe, Eiichiro, Tanoue, Takeshi, Thaiss, Christoph A., Sato, Mayuko, Toyooka, Kiminori, Said, Heba S., Yamagami, Hirokazu, Rice, Scott A., Gevers, Dirk, Johnson, Ryan C., Segre, Julia A., Chen, Kong, Kolls, Jay K., Elinav, Eran, Morita, Hidetoshi, Xavier, Ramnik J., Hattori, Masahira, Honda, Kenya
Published in Science (American Association for the Advancement of Science) (20.10.2017)
Published in Science (American Association for the Advancement of Science) (20.10.2017)
Get full text
Journal Article
Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
Atarashi, Koji, Tanoue, Takeshi, Oshima, Kenshiro, Suda, Wataru, Nagano, Yuji, Nishikawa, Hiroyoshi, Fukuda, Shinji, Saito, Takuro, Narushima, Seiko, Hase, Koji, Kim, Sangwan, Fritz, Joëlle V., Wilmes, Paul, Ueha, Satoshi, Matsushima, Kouji, Ohno, Hiroshi, Olle, Bernat, Sakaguchi, Shimon, Taniguchi, Tadatsugu, Morita, Hidetoshi, Hattori, Masahira, Honda, Kenya
Published in Nature (London) (08.08.2013)
Published in Nature (London) (08.08.2013)
Get full text
Journal Article
Effects of bowel preparation on the human gut microbiome and metabolome
Nagata, Naoyoshi, Tohya, Mari, Fukuda, Shinji, Suda, Wataru, Nishijima, Suguru, Takeuchi, Fumihiko, Ohsugi, Mitsuru, Tsujimoto, Tetsuro, Nakamura, Tomoka, Shimomura, Akira, Yanagisawa, Naohiro, Hisada, Yuya, Watanabe, Kazuhiro, Imbe, Koh, Akiyama, Junichi, Mizokami, Masashi, Miyoshi-Akiyama, Tohru, Uemura, Naomi, Hattori, Masahira
Published in Scientific reports (11.03.2019)
Published in Scientific reports (11.03.2019)
Get full text
Journal Article
The liver–brain–gut neural arc maintains the Treg cell niche in the gut
Teratani, Toshiaki, Mikami, Yohei, Nakamoto, Nobuhiro, Suzuki, Takahiro, Harada, Yosuke, Okabayashi, Koji, Hagihara, Yuya, Taniki, Nobuhito, Kohno, Keita, Shibata, Shinsuke, Miyamoto, Kentaro, Ishigame, Harumichi, Chu, Po-Sung, Sujino, Tomohisa, Suda, Wataru, Hattori, Masahira, Matsui, Minoru, Okada, Takaharu, Okano, Hideyuki, Inoue, Masayuki, Yada, Toshihiko, Kitagawa, Yuko, Yoshimura, Akihiko, Tanida, Mamoru, Tsuda, Makoto, Iwasaki, Yusaku, Kanai, Takanori
Published in Nature (London) (24.09.2020)
Published in Nature (London) (24.09.2020)
Get full text
Journal Article
Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells
Atarashi, Koji, Tanoue, Takeshi, Ando, Minoru, Kamada, Nobuhiko, Nagano, Yuji, Narushima, Seiko, Suda, Wataru, Imaoka, Akemi, Setoyama, Hiromi, Nagamori, Takashi, Ishikawa, Eiji, Shima, Tatsuichiro, Hara, Taeko, Kado, Shoichi, Jinnohara, Toshi, Ohno, Hiroshi, Kondo, Takashi, Toyooka, Kiminori, Watanabe, Eiichiro, Yokoyama, Shin-ichiro, Tokoro, Shunji, Mori, Hiroshi, Noguchi, Yurika, Morita, Hidetoshi, Ivanov, Ivaylo I., Sugiyama, Tsuyoshi, Nuñez, Gabriel, Camp, J. Gray, Hattori, Masahira, Umesaki, Yoshinori, Honda, Kenya
Published in Cell (08.10.2015)
Published in Cell (08.10.2015)
Get full text
Journal Article
Ancient DNA analysis of food remains in human dental calculus from the Edo period, Japan
Sawafuji, Rikai, Saso, Aiko, Suda, Wataru, Hattori, Masahira, Ueda, Shintaroh
Published in PloS one (04.03.2020)
Published in PloS one (04.03.2020)
Get full text
Journal Article