Aquaculture production of hatchling Hawaiian Bobtail Squid (Euprymna scolopes) is negatively impacted by decreasing environmental microbiome diversity
Murphy, Trevor R., Xiao, Rui, Brooks, Marjorie L., Rader, Bethany A., Hamilton‐Brehm, Scott D.
Published in Journal of applied microbiology (01.03.2022)
Published in Journal of applied microbiology (01.03.2022)
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Journal Article
Species-resolved, single-cell respiration rates reveal dominance of sulfate reduction in a deep continental subsurface ecosystem
Lindsay, Melody R, D'Angelo, Timothy, Munson-McGee, Jacob H, Saidi-Mehrabad, Alireza, Devlin, Molly, McGonigle, Julia, Goodell, Elizabeth, Herring, Melissa, Lubelczyk, Laura C, Mascena, Corianna, Brown, Julia M, Gavelis, Greg, Liu, Jiarui, Yousavich, D J, Hamilton-Brehm, Scott D, Hedlund, Brian P, Lang, Susan, Treude, Tina, Poulton, Nicole J, Stepanauskas, Ramunas, Moser, Duane P, Emerson, David, Orcutt, Beth N
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2024)
Published in Proceedings of the National Academy of Sciences - PNAS (09.04.2024)
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Journal Article
Efficient Degradation of Lignocellulosic Plant Biomass, without Pretreatment, by the Thermophilic Anaerobe “Anaerocellum thermophilum” DSM 6725
YANG, Sung-Jae, KATAEVA, Irina, HAMILTON-BREHM, Scott D, ENGLE, Nancy L, TSCHAPLINSKI, Timothy J, DOEPPKE, Crissa, DAVIS, Mark, WESTPHELING, Janet, ADAMS, Michael W. W
Published in Applied and Environmental Microbiology (01.07.2009)
Published in Applied and Environmental Microbiology (01.07.2009)
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Journal Article
Patterns of in situ Mineral Colonization by Microorganisms in a ~60°C Deep Continental Subsurface Aquifer
Mullin, Sean W, Wanger, Greg, Kruger, Brittany R, Sackett, Joshua D, Hamilton-Brehm, Scott D, Bhartia, Rohit, Amend, Jan P, Moser, Duane P, Orphan, Victoria J
Published in Frontiers in microbiology (19.11.2020)
Published in Frontiers in microbiology (19.11.2020)
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Journal Article
A comparative study of prokaryotic diversity and physicochemical characteristics of Devils Hole and the Ash Meadows Fish Conservation Facility, a constructed analog
Sackett, Joshua D, Huerta, Desiree C, Kruger, Brittany R, Hamilton-Brehm, Scott D, Moser, Duane P
Published in PloS one (15.03.2018)
Published in PloS one (15.03.2018)
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Journal Article
Caldicellulosiruptor Core and Pangenomes Reveal Determinants for Noncellulosomal Thermophilic Deconstruction of Plant Biomass
Blumer-Schuette, Sara E, Giannone, Richard J, Zurawski, Jeffrey V, Ozdemir, Inci, Ma, Qin, Yin, Yanbin, Xu, Ying, Kataeva, Irina, Poole, Farris L, Adams, Michael W. W, Hamilton-Brehm, Scott D, Elkins, James G, Larimer, Frank W, Land, Miriam L, Hauser, Loren J, Cottingham, Robert W, Hettich, Robert L, Kelly, Robert M
Published in Journal of Bacteriology (01.08.2012)
Published in Journal of Bacteriology (01.08.2012)
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Journal Article
Caldicellulosiruptor obsidiansis sp. nov., an Anaerobic, Extremely Thermophilic, Cellulolytic Bacterium Isolated from Obsidian Pool, Yellowstone National Park
Hamilton-Brehm, Scott D, Mosher, Jennifer J, Vishnivetskaya, Tatiana, Podar, Mircea, Carroll, Sue, Allman, Steve, Phelps, Tommy J, Keller, Martin, Elkins, James G
Published in Applied and Environmental Microbiology (01.02.2010)
Published in Applied and Environmental Microbiology (01.02.2010)
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Journal Article
Ancient human mitochondrial DNA and radiocarbon analysis of archived quids from the Mule Spring Rockshelter, Nevada, USA
Hamilton-Brehm, Scott D, Hristova, Lidia T, Edwards, Susan R, Wedding, Jeffrey R, Snow, Meradeth, Kruger, Brittany R, Moser, Duane P
Published in PloS one (09.03.2018)
Published in PloS one (09.03.2018)
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Journal Article
Thermoanaerosceptrum fracticalcis gen. nov. sp. nov., a Novel Fumarate-Fermenting Microorganism From a Deep Fractured Carbonate Aquifer of the US Great Basin
Hamilton-Brehm, Scott D., Stewart, Laura E., Zavarin, Mavrik, Caldwell, Matt, Lawson, Paul A., Onstott, Tullis C., Grzymski, Joseph, Neveux, Iva, Lollar, Barbara Sherwood, Russell, Charles E., Moser, Duane P.
Published in Frontiers in microbiology (27.09.2019)
Published in Frontiers in microbiology (27.09.2019)
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Journal Article
EMS-Induced Mutagenesis of Clostridium carboxidivorans for Increased Atmospheric CO2 Reduction Efficiency and Solvent Production
Lakhssassi, Naoufal, Baharlouei, Azam, Meksem, Jonas, Hamilton-Brehm, Scott D., Lightfoot, David A., Meksem, Khalid, Liang, Yanna
Published in Microorganisms (Basel) (14.08.2020)
Published in Microorganisms (Basel) (14.08.2020)
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Journal Article
Complete Genome Sequence of the Cellulolytic Thermophile Caldicellulosiruptor obsidiansis OB47T
Elkins, James G, Lochner, Adriane, Hamilton-Brehm, Scott D, Davenport, Karen Walston, Podar, Mircea, Brown, Steven D, Land, Miriam L, Hauser, Loren J, Klingeman, Dawn M, Raman, Babu, Goodwin, Lynne A, Tapia, Roxanne, Meincke, Linda J, Detter, J Chris, Bruce, David C, Han, Cliff S, Palumbo, Anthony V, Cottingham, Robert W, Keller, Martin, Graham, David E
Published in Journal of Bacteriology (01.11.2010)
Published in Journal of Bacteriology (01.11.2010)
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Journal Article
Antimicrobial Activity of the Iron-Sulfur Nitroso Compound Roussin's Black Salt [Fe4S3(NO)7] on the Hyperthermophilic Archaeon Pyrococcus furiosus
HAMILTON-BREHM, Scott D, SCHUT, Gerrit J, ADAMS, Michael W. W
Published in Applied and Environmental Microbiology (01.04.2009)
Published in Applied and Environmental Microbiology (01.04.2009)
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Journal Article
Subsurface microbial communities as a tool for characterizing regional-scale groundwater flow
Merino, Nancy, Jackson, Tracie R., Campbell, James H., Kersting, Annie B., Sackett, Joshua, Fisher, Jenny C., Bruckner, James C., Zavarin, Mavrik, Hamilton-Brehm, Scott D., Moser, Duane P.
Published in The Science of the total environment (10.10.2022)
Published in The Science of the total environment (10.10.2022)
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Journal Article
Next-generation 3D-printed nutritious food derived from waste plastic and biomass
Jayakody, Lahiru N., Hamilton-Brehm, Scott D., Anderson, Ken B., McCarroll, Matthew E., Aruma Baduge, Gayan L., Sivakumar, Poopalasingam, Majumder, Kaustav, Jasiuk, Iwona M., Tannenbaum, Rina R.
Published in Trends in biotechnology (Regular ed.) (01.06.2024)
Published in Trends in biotechnology (Regular ed.) (01.06.2024)
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Journal Article
A Set of In Situ Informed Simulated Medium Formats for Culturing Environmentally Acquired Anaerobic Microorganisms
Zimmerman, Tia, Leamon, Garion, Dillenburg, Georgia, Egge, Bethany, Pierce, Jennifer, Elliott, Ben, Murphy, Trevor, Brooks, Marjorie, Hamilton-Brehm, Scott D
Published in Journal of visualized experiments (12.01.2024)
Published in Journal of visualized experiments (12.01.2024)
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Journal Article
Electrically polarized nanoscale surfaces generate reactive oxygenated and chlorinated species for deactivation of microorganisms
Vargas-Lizarazo, Annie Y, Ali, M Aswad, Mazumder, Nehal A, Kohli, Gitanjali M, Zaborska, Miroslava, Sons, Tyler, Garnett, Michelle, Senanayake, Ishani M, Goodson, Boyd M, Vargas-Muñiz, José M, Pond, Amber, Jensik, Philip J, Olson, Michael E, Hamilton-Brehm, Scott D, Kohli, Punit
Published in Science advances (02.08.2024)
Published in Science advances (02.08.2024)
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Journal Article
Community Analysis of Plant Biomass-Degrading Microorganisms from Obsidian Pool, Yellowstone National Park
Vishnivetskaya, Tatiana A, Hamilton-Brehm, Scott D, Podar, Mircea, Mosher, Jennifer J, Palumbo, Anthony V, Phelps, Tommy J, Keller, Martin, Elkins, James G
Published in Microbial ecology (01.02.2015)
Published in Microbial ecology (01.02.2015)
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Journal Article
Evaluation of the bioconversion of genetically modified switchgrass using simultaneous saccharification and fermentation and a consolidated bioprocessing approach
Yee, Kelsey L, Rodriguez Jr, Miguel, Tschaplinski, Timothy J, Engle, Nancy L, Martin, Madhavi Z, Fu, Chunxiang, Wang, Zeng-Yu, Hamilton-Brehm, Scott D, Mielenz, Jonathan R
Published in Biotechnology for biofuels (12.11.2012)
Published in Biotechnology for biofuels (12.11.2012)
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