qFit 3: Protein and ligand multiconformer modeling for X‐ray crystallographic and single‐particle cryo‐EM density maps
Riley, Blake T., Wankowicz, Stephanie A., Oliveira, Saulo H. P., Zundert, Gydo C. P., Hogan, Daniel W., Fraser, James S., Keedy, Daniel A., Bedem, Henry
Published in Protein science (01.01.2021)
Published in Protein science (01.01.2021)
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Journal Article
Scattering of compactlike structures
Bazeia, D., Mendonça, T. S., Menezes, R., de Oliveira, H. P.
Published in The European physical journal. C, Particles and fields (01.12.2019)
Published in The European physical journal. C, Particles and fields (01.12.2019)
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Journal Article
Inflammatory profile of apical periodontitis associated with liver fibrosis in rats: histological and immunohistochemical analysis
Cantiga‐Silva, C., Estrela, C., Segura‐Egea, J. J., Azevedo, J. P., Oliveira, P. H. C., Cardoso, C. B. M., Pinheiro, T. N., Ervolino, E., Sivieri‐Araújo, G., Cintra, L. T. A.
Published in International endodontic journal (01.08.2021)
Published in International endodontic journal (01.08.2021)
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Journal Article
Large polarons in two-dimensional fullerene networks: the crucial role of anisotropy in charge transport
Cassiano, T. S. A, Pereira, M. L, e Silva, G. M, de Oliveira Neto, P. H, Ribeiro, L. A
Published in Nanoscale (01.02.2024)
Published in Nanoscale (01.02.2024)
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On the mechanical, electronic, and optical properties of the boron nitride analog for the recently synthesized biphenylene network: a DFT study
Monteiro, F. F., Giozza, W. F., Júnior, R. T. de Sousa, de Oliveira Neto, P. H., Júnior, L. A. Ribeiro, Júnior, M. L. Pereira
Published in Journal of molecular modeling (01.07.2023)
Published in Journal of molecular modeling (01.07.2023)
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Inflammatory biomarkers in infective endocarditis: machine learning to predict mortality
Ris, T., Teixeira‐Carvalho, A., Coelho, R. Matos Pinto, Brandao‐de‐Resende, C., Gomes, M. Souza, Amaral, L. Rodrigues, Pinto, P. H. Oliveira Murta, Santos, L. J. Souza, Salles, J. Teixeira, Roos‐Hesselink, Jolien, Verkaik, N., Ferrari, T. Cristina Abreu, Nunes, M. C. Pereira
Published in Clinical and experimental immunology (01.06.2019)
Published in Clinical and experimental immunology (01.06.2019)
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Journal Article
Relationship between apical periodontitis and atherosclerosis in rats: lipid profile and histological study
Conti, L. C., Segura‐Egea, J. J., Cardoso, C. B. M., Benetti, F., Azuma, M. M., Oliveira, P. H. C., Bomfim, S. R. M., Cintra, L. T. A.
Published in International endodontic journal (01.10.2020)
Published in International endodontic journal (01.10.2020)
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Journal Article
Contrasting Disease Progression, Microglia Reactivity, Tolerance, and Resistance to Toxoplasma gondii Infection in Two Mouse Strains
Diniz, Daniel G, de Oliveira, Jhonnathan H P, Guerreiro, Luma C F, de Menezes, Gabriel C, de Assis, Alexa C L, Duarte, Tainá Q, Dos Santos, Izabelly B D, Maciel, Flávia D, Soares, Gabrielly L da S, Araújo, Sanderson C, Franco, Felipe T de C, do Carmo, Ediclei L, Morais, Rafaela Dos A B, de Lima, Camila M, Brites, Dora, Anthony, Daniel C, Diniz, José A P, Diniz, Cristovam W P
Published in Biomedicines (26.06.2024)
Published in Biomedicines (26.06.2024)
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Journal Article
STCRDab: the structural T-cell receptor database
Leem, Jinwoo, de Oliveira, Saulo H P, Krawczyk, Konrad, Deane, Charlotte M
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
Fish Oil Supplementation Improves Neutrophil Function During Cancer Chemotherapy
Bonatto, Sandro J. R., Oliveira, Heloisa H. P., Nunes, Everson A., Pequito, Daniele, Iagher, Fabiola, Coelho, Isabela, Naliwaiko, Katya, Kryczyk, Marcelo, Brito, Gleisson A. P., Repka, João, Sabóia, Luciano V., Fukujima, George, Calder, Philip C., Fernandes, Luiz C.
Published in Lipids (01.04.2012)
Published in Lipids (01.04.2012)
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Journal Article
AT1 receptor antagonism promotes bone loss attenuation in experimental periodontitis, blocks inflammatory mediators, and upregulates antioxidant enzymes and bone formation markers
Dionísio, Thiago J, Souza, Gabriela P, Colombini-Ishikiriama, Bella L, Garbieri, Thais F, Parisi, Viviane A, Oliveira, Gabriela M, Cano, Isadora P, Rodini, Camila O, Oliveira, Sandra H P, Greene, Andrew S, Santos, Carlos F
Published in Journal of periodontology (1970) (01.04.2020)
Published in Journal of periodontology (1970) (01.04.2020)
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Journal Article
qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X‑Ray Electron Density Maps
van Zundert, Gydo C. P, Hudson, Brandi M, de Oliveira, Saulo H. P, Keedy, Daniel A, Fonseca, Rasmus, Heliou, Amelie, Suresh, Pooja, Borrelli, Kenneth, Day, Tyler, Fraser, James S, van den Bedem, Henry
Published in Journal of medicinal chemistry (27.12.2018)
Published in Journal of medicinal chemistry (27.12.2018)
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Journal Article
Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis
Dasgupta, Medhanjali, Budday, Dominik, de Oliveira, Saulo H. P., Madzelan, Peter, Marchany-Rivera, Darya, Seravalli, Javier, Hayes, Brandon, Sierra, Raymond G., Boutet, Sébastien, Hunter, Mark S., Alonso-Mori, Roberto, Batyuk, Alexander, Wierman, Jennifer, Lyubimov, Artem, Brewster, Aaron S., Sauter, Nicholas K., Applegate, Gregory A., Tiwari, Virendra K., Berkowitz, David B., Thompson, Michael C., Cohen, Aina E., Fraser, James S., Wall, Michael E., van den Bedem, Henry, Wilson, Mark A.
Published in Proceedings of the National Academy of Sciences - PNAS (17.12.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (17.12.2019)
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