A Children's Oncology Group and TARGET initiative exploring the genetic landscape of Wilms tumor
Gadd, Samantha, Huff, Vicki, Walz, Amy L, Ooms, Ariadne H A G, Armstrong, Amy E, Gerhard, Daniela S, Smith, Malcolm A, Auvil, Jaime M Guidry, Meerzaman, Daoud, Chen, Qing-Rong, Hsu, Chih Hao, Yan, Chunhua, Nguyen, Cu, Hu, Ying, Hermida, Leandro C, Davidsen, Tanja, Gesuwan, Patee, Ma, Yussanne, Zong, Zusheng, Mungall, Andrew J, Moore, Richard A, Marra, Marco A, Dome, Jeffrey S, Mullighan, Charles G, Ma, Jing, Wheeler, David A, Hampton, Oliver A, Ross, Nicole, Gastier-Foster, Julie M, Arold, Stefan T, Perlman, Elizabeth J
Published in Nature genetics (01.10.2017)
Published in Nature genetics (01.10.2017)
Get full text
Journal Article
Genetic predisposition to neuroblastoma mediated by a LMO1 super-enhancer polymorphism
Oldridge, Derek A., Wood, Andrew C., Weichert-Leahey, Nina, Crimmins, Ian, Sussman, Robyn, Winter, Cynthia, McDaniel, Lee D., Diamond, Maura, Hart, Lori S., Zhu, Shizhen, Durbin, Adam D., Abraham, Brian J., Anders, Lars, Tian, Lifeng, Zhang, Shile, Wei, Jun S., Khan, Javed, Bramlett, Kelli, Rahman, Nazneen, Capasso, Mario, Iolascon, Achille, Gerhard, Daniela S., Guidry Auvil, Jaime M., Young, Richard A., Hakonarson, Hakon, Diskin, Sharon J., Thomas Look, A., Maris, John M.
Published in Nature (London) (17.12.2015)
Published in Nature (London) (17.12.2015)
Get full text
Journal Article
Genomic Profiling of Pediatric Acute Myeloid Leukemia Reveals a Changing Mutational Landscape from Disease Diagnosis to Relapse
Farrar, Jason E, Schuback, Heather L, Ries, Rhonda E, Wai, Daniel, Hampton, Oliver A, Trevino, Lisa R, Alonzo, Todd A, Guidry Auvil, Jaime M, Davidsen, Tanja M, Gesuwan, Patee, Hermida, Leandro, Muzny, Donna M, Dewal, Ninad, Rustagi, Navin, Lewis, Lora R, Gamis, Alan S, Wheeler, David A, Smith, Malcolm A, Gerhard, Daniela S, Meshinchi, Soheil
Published in Cancer research (Chicago, Ill.) (15.04.2016)
Published in Cancer research (Chicago, Ill.) (15.04.2016)
Get full text
Journal Article
Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours
Ma, Xiaotu, Liu, Yu, Liu, Yanling, Alexandrov, Ludmil B., Edmonson, Michael N., Gawad, Charles, Zhou, Xin, Li, Yongjin, Rusch, Michael C., Easton, John, Huether, Robert, Gonzalez-Pena, Veronica, Wilkinson, Mark R., Hermida, Leandro C., Davis, Sean, Sioson, Edgar, Pounds, Stanley, Cao, Xueyuan, Ries, Rhonda E., Wang, Zhaoming, Chen, Xiang, Dong, Li, Diskin, Sharon J., Smith, Malcolm A., Guidry Auvil, Jaime M., Meltzer, Paul S., Lau, Ching C., Perlman, Elizabeth J., Maris, John M., Meshinchi, Soheil, Hunger, Stephen P., Gerhard, Daniela S., Zhang, Jinghui
Published in Nature (London) (15.03.2018)
Published in Nature (London) (15.03.2018)
Get full text
Journal Article
Genetic mechanisms of primary chemotherapy resistance in pediatric acute myeloid leukemia
McNeer, Nicole A., Philip, John, Geiger, Heather, Ries, Rhonda E., Lavallée, Vincent-Philippe, Walsh, Michael, Shah, Minita, Arora, Kanika, Emde, Anne-Katrin, Robine, Nicolas, Alonzo, Todd A., Kolb, E. Anders, Gamis, Alan S., Smith, Malcolm, Gerhard, Daniela Se, Guidry-Auvil, Jaime, Meshinchi, Soheil, Kentsis, Alex
Published in Leukemia (01.08.2019)
Published in Leukemia (01.08.2019)
Get full text
Journal Article
The Role of FAS Receptor Methylation in Osteosarcoma Metastasis
Sun, Jiayi M, Chow, Wing-Yuk, Xu, Gufeng, Hicks, M John, Nakka, Manjula, Shen, Jianhe, Ng, Patrick Kwok Shing, Taylor, Aaron M, Yu, Alexander, Farrar, Jason E, Barkauskas, Donald A, Gorlick, Richard, Guidry Auvil, Jaime M, Gerhard, Daniela, Meltzer, Paul, Guerra, Rudy, Man, Tsz-Kwong, Lau, Ching C, On Behalf Of The Target Osteosarcoma Consortium
Published in International journal of molecular sciences (29.07.2023)
Published in International journal of molecular sciences (29.07.2023)
Get full text
Journal Article
The genetic basis and cell of origin of mixed phenotype acute leukaemia
Alexander, Thomas B., Gu, Zhaohui, Iacobucci, Ilaria, Dickerson, Kirsten, Choi, John K., Xu, Beisi, Payne-Turner, Debbie, Yoshihara, Hiroki, Loh, Mignon L., Horan, John, Buldini, Barbara, Basso, Giuseppe, Elitzur, Sarah, de Haas, Valerie, Zwaan, C. Michel, Yeoh, Allen, Reinhardt, Dirk, Tomizawa, Daisuke, Kiyokawa, Nobutaka, Lammens, Tim, De Moerloose, Barbara, Catchpoole, Daniel, Hori, Hiroki, Moorman, Anthony, Moore, Andrew S., Hrusak, Ondrej, Meshinchi, Soheil, Orgel, Etan, Devidas, Meenakshi, Borowitz, Michael, Wood, Brent, Heerema, Nyla A., Carrol, Andrew, Yang, Yung-Li, Smith, Malcolm A., Davidsen, Tanja M., Hermida, Leandro C., Gesuwan, Patee, Marra, Marco A., Ma, Yussanne, Mungall, Andrew J., Moore, Richard A., Jones, Steven J. M., Valentine, Marcus, Janke, Laura J., Rubnitz, Jeffrey E., Pui, Ching-Hon, Ding, Liang, Liu, Yu, Zhang, Jinghui, Nichols, Kim E., Downing, James R., Cao, Xueyuan, Shi, Lei, Pounds, Stanley, Newman, Scott, Pei, Deqing, Guidry Auvil, Jaime M., Gerhard, Daniela S., Hunger, Stephen P., Inaba, Hiroto, Mullighan, Charles G.
Published in Nature (London) (01.10.2018)
Published in Nature (London) (01.10.2018)
Get full text
Journal Article
Relapsed neuroblastomas show frequent RAS-MAPK pathway mutations
Eleveld, Thomas F, Oldridge, Derek A, Bernard, Virginie, Koster, Jan, Daage, Leo Colmet, Diskin, Sharon J, Schild, Linda, Bentahar, Nadia Bessoltane, Bellini, Angela, Chicard, Mathieu, Lapouble, Eve, Combaret, Valérie, Legoix-Né, Patricia, Michon, Jean, Pugh, Trevor J, Hart, Lori S, Rader, JulieAnn, Attiyeh, Edward F, Wei, Jun S, Zhang, Shile, Naranjo, Arlene, Gastier-Foster, Julie M, Hogarty, Michael D, Asgharzadeh, Shahab, Smith, Malcolm A, Guidry Auvil, Jaime M, Watkins, Thomas B K, Zwijnenburg, Danny A, Ebus, Marli E, van Sluis, Peter, Hakkert, Anne, van Wezel, Esther, van der Schoot, C Ellen, Westerhout, Ellen M, Schulte, Johannes H, Tytgat, Godelieve A, Dolman, M Emmy M, Janoueix-Lerosey, Isabelle, Gerhard, Daniela S, Caron, Huib N, Delattre, Olivier, Khan, Javed, Versteeg, Rogier, Schleiermacher, Gudrun, Molenaar, Jan J, Maris, John M
Published in Nature genetics (01.08.2015)
Published in Nature genetics (01.08.2015)
Get full text
Journal Article
Clinically Relevant Cytotoxic Immune Cell Signatures and Clonal Expansion of T-Cell Receptors in High-Risk MYCN -Not-Amplified Human Neuroblastoma
Wei, Jun S, Kuznetsov, Igor B, Zhang, Shile, Song, Young K, Asgharzadeh, Shahab, Sindiri, Sivasish, Wen, Xinyu, Patidar, Rajesh, Najaraj, Sushma, Walton, Ashley, Auvil, Jaime M Guidry, Gerhard, Daniela S, Yuksel, Aysen, Catchpoole, Daniel, Hewitt, Stephen M, Sondel, Paul M, Seeger, Robert, Maris, John M, Khan, Javed
Published in Clinical cancer research (15.11.2018)
Published in Clinical cancer research (15.11.2018)
Get full text
Journal Article
The genetic landscape of high-risk neuroblastoma
Pugh, Trevor J, Morozova, Olena, Attiyeh, Edward F, Asgharzadeh, Shahab, Wei, Jun S, Auclair, Daniel, Carter, Scott L, Cibulskis, Kristian, Hanna, Megan, Kiezun, Adam, Kim, Jaegil, Lawrence, Michael S, Lichenstein, Lee, McKenna, Aaron, Pedamallu, Chandra Sekhar, Ramos, Alex H, Shefler, Erica, Sivachenko, Andrey, Sougnez, Carrie, Stewart, Chip, Ally, Adrian, Birol, Inanc, Chiu, Readman, Corbett, Richard D, Hirst, Martin, Jackman, Shaun D, Kamoh, Baljit, Khodabakshi, Alireza Hadj, Krzywinski, Martin, Lo, Allan, Moore, Richard A, Mungall, Karen L, Qian, Jenny, Tam, Angela, Thiessen, Nina, Zhao, Yongjun, Cole, Kristina A, Diamond, Maura, Diskin, Sharon J, Mosse, Yael P, Wood, Andrew C, Ji, Lingyun, Sposto, Richard, Badgett, Thomas, London, Wendy B, Moyer, Yvonne, Gastier-Foster, Julie M, Smith, Malcolm A, Auvil, Jaime M Guidry, Gerhard, Daniela S, Hogarty, Michael D, Jones, Steven J M, Lander, Eric S, Gabriel, Stacey B, Getz, Gad, Seeger, Robert C, Khan, Javed, Marra, Marco A, Meyerson, Matthew, Maris, John M
Published in Nature genetics (01.03.2013)
Published in Nature genetics (01.03.2013)
Get full text
Journal Article
Significance of TP53 Mutation in Wilms Tumors with Diffuse Anaplasia: A Report from the Children's Oncology Group
Ooms, Ariadne H A G, Gadd, Samantha, Gerhard, Daniela S, Smith, Malcolm A, Guidry Auvil, Jaime M, Meerzaman, Daoud, Chen, Qing-Rong, Hsu, Chih Hao, Yan, Chunhua, Nguyen, Cu, Hu, Ying, Ma, Yussanne, Zong, Zusheng, Mungall, Andrew J, Moore, Richard A, Marra, Marco A, Huff, Vicki, Dome, Jeffrey S, Chi, Yueh-Yun, Tian, Jing, Geller, James I, Mullighan, Charles G, Ma, Jing, Wheeler, David A, Hampton, Oliver A, Walz, Amy L, van den Heuvel-Eibrink, Marry M, de Krijger, Ronald R, Ross, Nicole, Gastier-Foster, Julie M, Perlman, Elizabeth J
Published in Clinical cancer research (15.11.2016)
Published in Clinical cancer research (15.11.2016)
Get full text
Journal Article
Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia
Ma, Xiaotu, Edmonson, Michael, Yergeau, Donald, Muzny, Donna M., Hampton, Oliver A., Rusch, Michael, Song, Guangchun, Easton, John, Harvey, Richard C., Wheeler, David A., Ma, Jing, Doddapaneni, HarshaVardhan, Vadodaria, Bhavin, Wu, Gang, Nagahawatte, Panduka, Carroll, William L., Chen, I-Ming, Gastier-Foster, Julie M., Relling, Mary V., Smith, Malcolm A., Devidas, Meenakshi, Auvil, Jaime M. Guidry, Downing, James R., Loh, Mignon L., Willman, Cheryl L., Gerhard, Daniela S., Mullighan, Charles G., Hunger, Stephen P., Zhang, Jinghui
Published in Nature communications (19.03.2015)
Published in Nature communications (19.03.2015)
Get full text
Journal Article
Cadherin-11 in poor prognosis malignancies and rheumatoid arthritis: common target, common therapies
Assefnia, Shahin, Dakshanamurthy, Sivanesan, Guidry Auvil, Jaime M, Hampel, Constanze, Anastasiadis, Panos Z, Kallakury, Bhaskar, Uren, Aykut, Foley, David W, Brown, Milton L, Shapiro, Lawrence, Brenner, Michael, Haigh, David, Byers, Stephen W
Published in Oncotarget (30.03.2014)
Published in Oncotarget (30.03.2014)
Get full text
Journal Article
MLLT1 YEATS domain mutations in clinically distinctive Favourable Histology Wilms tumours
Perlman, Elizabeth J., Gadd, Samantha, Arold, Stefan T., Radhakrishnan, Anand, Gerhard, Daniela S., Jennings, Lawrence, Huff, Vicki, Guidry Auvil, Jaime M., Davidsen, Tanja M., Dome, Jeffrey S., Meerzaman, Daoud, Hsu, Chih Hao, Nguyen, Cu, Anderson, James, Ma, Yussanne, Mungall, Andrew J., Moore, Richard A., Marra, Marco A., Mullighan, Charles G., Ma, Jing, Wheeler, David A., Hampton, Oliver A., Gastier-Foster, Julie M., Ross, Nicole, Smith, Malcolm A.
Published in Nature communications (04.12.2015)
Published in Nature communications (04.12.2015)
Get full text
Journal Article
CSF3R mutations have a high degree of overlap with CEBPA mutations in pediatric AML
Maxson, Julia E., Ries, Rhonda E., Wang, Yi-Cheng, Gerbing, Robert B., Kolb, E.Anders, Thompson, Sarah L., Guidry Auvil, Jaime M., Marra, Marco A., Ma, Yussanne, Zong, Zusheng, Mungall, Andrew J., Moore, Richard, Long, William, Gesuwan, Patee, Davidsen, Tanja M., Hermida, Leandro C., Hughes, Seamus B., Farrar, Jason E., Radich, Jerald P., Smith, Malcolm A., Gerhard, Daniela S., Gamis, Alan S., Alonzo, Todd A., Meshinchi, Soheil
Published in Blood (16.06.2016)
Published in Blood (16.06.2016)
Get full text
Journal Article
GA4GH Passport standard for digital identity and access permissions
Voisin, Craig, Linden, Mikael, Dyke, Stephanie O.M., Bowers, Sarion R., Alper, Pinar, Barkley, Maxmillian P., Bernick, David, Chao, Jianpeng, Courtot, Mélanie, Jeanson, Francis, Konopko, Melissa A., Kuba, Martin, Lawson, Jonathan, Leinonen, Jaakko, Li, Stephanie, Ota Wang, Vivian, Philippakis, Anthony A., Reinold, Kathy, Rushton, Gregory A., Spalding, J. Dylan, Törnroos, Juha, Tulchinsky, Ilya, Guidry Auvil, Jaime M., Nyrönen, Tommi H.
Published in Cell genomics (10.11.2021)
Published in Cell genomics (10.11.2021)
Get full text
Journal Article
The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions
Bolouri, Hamid, Farrar, Jason E, Triche, Timothy, Ries, Rhonda E, Lim, Emilia L, Alonzo, Todd A, Ma, Yussanne, Moore, Richard, Mungall, Andrew J, Marra, Marco A, Zhang, Jinghui, Ma, Xiaotu, Liu, Yu, Liu, Yanling, Auvil, Jaime M Guidry, Davidsen, Tanja M, Gesuwan, Patee, Hermida, Leandro C, Salhia, Bodour, Capone, Stephen, Ramsingh, Giridharan, Zwaan, Christian Michel, Noort, Sanne, Piccolo, Stephen R, Kolb, E Anders, Gamis, Alan S, Smith, Malcolm A, Gerhard, Daniela S, Meshinchi, Soheil
Published in Nature medicine (01.01.2018)
Published in Nature medicine (01.01.2018)
Get full text
Journal Article
TCF21 hypermethylation in genetically quiescent clear cell sarcoma of the kidney
Gooskens, Saskia L, Gadd, Samantha, Guidry Auvil, Jaime M, Gerhard, Daniela S, Khan, Javed, Patidar, Rajesh, Meerzaman, Daoud, Chen, Qing-Rong, Hsu, Chih Hao, Yan, Chunhua, Nguyen, Cu, Hu, Ying, Mullighan, Charles G, Ma, Jing, Jennings, Lawrence J, de Krijger, Ronald R, van den Heuvel-Eibrink, Marry M, Smith, Malcolm A, Ross, Nicole, Gastier-Foster, Julie M, Perlman, Elizabeth J
Published in Oncotarget (30.06.2015)
Published in Oncotarget (30.06.2015)
Get full text
Journal Article
Cancer Informatics for Cancer Centers: Scientific Drivers for Informatics, Data Science, and Care in Pediatric, Adolescent, and Young Adult Cancer
Kerlavage, Anthony R, Kirchhoff, Anne C, Guidry Auvil, Jaime M, Sharpless, Norman E, Davis, Kara L, Reilly, Karlyne, Reaman, Gregory, Penberthy, Lynne, Deapen, Dennis, Hwang, Amie, Durbin, Eric B, Gallotto, Sara L, Aplenc, Richard, Volchenboum, Samuel L, Heath, Allison P, Aronow, Bruce J, Zhang, Jinghui, Vaske, Olena, Alonzo, Todd A, Nathan, Paul C, Poynter, Jenny N, Armstrong, Greg, Hahn, Erin E, Wernli, Karen J, Greene, Casey, DiGiovanna, Jack, Resnick, Adam C, Shalley, Eve R, Nadaf, Sorena, Kibbe, Warren A
Published in JCO clinical cancer informatics (01.08.2021)
Published in JCO clinical cancer informatics (01.08.2021)
Get more information
Journal Article