Systematic tissue annotations of genomics samples by modeling unstructured metadata
Hawkins, Nathaniel T., Maldaver, Marc, Yannakopoulos, Anna, Guare, Lindsay A., Krishnan, Arjun
Published in Nature communications (08.11.2022)
Published in Nature communications (08.11.2022)
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Journal Article
Genotype-First Approach Identifies an Association between rs28374544/FOG2S657G and Liver Disease through Alterations in mTORC1 Signaling
Conlon, Donna M, Kanakala, Siri, Cherlin, Tess, Yi-An, Ko, Vitali, Cecilia, Sharavana Gurunathan, Venkatesh, Rasika, Woerner, Jakob, Guare, Lindsay A, Penn Medicine Biobank, Verma, Anurag, Verma, Shefali S, Guerraty, Marie A
Published in Genes (21.08.2024)
Published in Genes (21.08.2024)
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Journal Article
Enhancing genetic association power in endometriosis through unsupervised clustering of clinical subtypes identified from electronic health records
Guare, Lindsay A, Humphrey, Leigh Ann, Rush, Margaret, Pollie, Meredith, Jaworski, James, Akerele, Alexis T, Luo, Yuan, Weng, Chunhua, We, Wei-Qi, Kottyan, Leah, Jarvik, Gail, Elhadad, Noemie, Zondervan, Krina, Missmer, Stacey, Vujkovic, Marijana, Velez-Edwards, Digna, Senapati, Suneeta, Setia-Verma, Shefali
Published in Research square (09.09.2024)
Published in Research square (09.09.2024)
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GENOTYPE-PHENOTYPE ASSOCIATIONS IN ENDOMETRIOSIS AND ADENOMYOSIS: USING WHOLE-EXOME SEQUENCING TO CHARACTERIZE GENETIC BURDEN IN CANDIDATE GENES ASSOCIATED WITH ENDOMETRIOSIS
Humphries, Leigh A., Guare, Lindsay A., Rush, Margaret A., Pollie, Meridith, Verma, Shefali Setia, Senapati, Suneeta
Published in Fertility and sterility (01.10.2024)
Published in Fertility and sterility (01.10.2024)
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BEYOND RACE AND ETHNICITY: UTILIZING GENETIC ANCESTRY AND MEASURES OF SOCIAL VULNERABILITY IN A DIVERSE POPULATION TO CHARACTERIZE DISPARITIES IN THE DIAGNOSIS OF ENDOMETRIOSIS
Humphries, Leigh A., Rush, Margaret, Guare, Lindsay, Verma, Shefali Setia, Senapati, Suneeta
Published in Fertility and sterility (01.10.2023)
Published in Fertility and sterility (01.10.2023)
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Journal Article
Abstract 15103: Stratifying Coronary Artery Disease (CAD) GWAS Loci Using Cardiac Perfusion Positron Emission Tomography to Identify Loci for Coronary Microvascular Disease
Verma, Shefali, Guare, Lindsay, Irving, Brett, Levin, Michael, Guerraty, Marie A
Published in Circulation (New York, N.Y.) (08.11.2022)
Published in Circulation (New York, N.Y.) (08.11.2022)
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Abstract 15054: Genome Wide Association Study of Coronary Microvascular Disease Assessed by Cardiac Perfusion Positron Emission Tomography
Verma, Shefali, Guare, Lindsay, Irving, Brett, Levin, Michael, Guerraty, Marie A
Published in Circulation (New York, N.Y.) (08.11.2022)
Published in Circulation (New York, N.Y.) (08.11.2022)
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Journal Article
Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program
Verma, Anurag, Huffman, Jennifer E, Rodriguez, Alex, Conery, Mitchell, Liu, Molei, Ho, Yuk-Lam, Kim, Youngdae, Heise, David A, Guare, Lindsay, Panickan, Vidul Ayakulangara, Garcon, Helene, Linares, Franciel, Costa, Lauren, Goethert, Ian, Tipton, Ryan, Honerlaw, Jacqueline, Davies, Laura, Whitbourne, Stacey, Cohen, Jeremy, Posner, Daniel C, Sangar, Rahul, Murray, Michael, Wang, Xuan, Dochtermann, Daniel R, Devineni, Poornima, Shi, Yunling, Nandi, Tarak Nath, Assimes, Themistocles L, Brunette, Charles A, Carroll, Robert J, Clifford, Royce, Duvall, Scott, Gelernter, Joel, Hung, Adriana, Iyengar, Sudha K, Joseph, Jacob, Kember, Rachel, Kranzler, Henry, Kripke, Colleen M, Levey, Daniel, Luoh, Shiuh-Wen, Merritt, Victoria C, Overstreet, Cassie, Deak, Joseph D, Grant, Struan F A, Polimanti, Renato, Roussos, Panos, Shakt, Gabrielle, Sun, Yan V, Tsao, Noah, Venkatesh, Sanan, Voloudakis, Georgios, Justice, Amy, Begoli, Edmon, Ramoni, Rachel, Tourassi, Georgia, Pyarajan, Saiju, Tsao, Philip, O'Donnell, Christopher J, Muralidhar, Sumitra, Moser, Jennifer, Casas, Juan P, Bick, Alexander G, Zhou, Wei, Cai, Tianxi, Voight, Benjamin F, Cho, Kelly, Gaziano, J Michael, Madduri, Ravi K, Damrauer, Scott, Liao, Katherine P
Published in Science (American Association for the Advancement of Science) (19.07.2024)
Published in Science (American Association for the Advancement of Science) (19.07.2024)
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A multi-cohort genome-wide association study in African ancestry individuals reveals risk loci for primary open-angle glaucoma
Verma, Shefali S., Gudiseva, Harini V., Chavali, Venkata R.M., Salowe, Rebecca J., Bradford, Yuki, Guare, Lindsay, Lucas, Anastasia, Collins, David W., Vrathasha, Vrathasha, Nair, Rohini M., Rathi, Sonika, Zhao, Bingxin, He, Jie, Lee, Roy, Zenebe-Gete, Selam, Bowman, Anita S., McHugh, Caitlin P., Zody, Michael C., Pistilli, Maxwell, Khachatryan, Naira, Daniel, Ebenezer, Murphy, Windell, Henderer, Jeffrey, Kinzy, Tyler G., Iyengar, Sudha K., Peachey, Neal S., Taylor, Kent D., Guo, Xiuqing, Chen, Yii-Der Ida, Zangwill, Linda, Girkin, Christopher, Ayyagari, Radha, Liebmann, Jeffrey, Chuka-Okosa, Chimd M., Williams, Susan E., Akafo, Stephen, Budenz, Donald L., Olawoye, Olusola O., Ramsay, Michele, Ashaye, Adeyinka, Akpa, Onoja M., Aung, Tin, Wiggs, Janey L., Ross, Ahmara G., Cui, Qi N., Addis, Victoria, Lehman, Amanda, Miller-Ellis, Eydie, Sankar, Prithvi S., Williams, Scott M., Ying, Gui-shuang, Cooke Bailey, Jessica, Rotter, Jerome I., Weinreb, Robert, Khor, Chiea Chuen, Hauser, Michael A., Ritchie, Marylyn D., O’Brien, Joan M.
Published in Cell (18.01.2024)
Published in Cell (18.01.2024)
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Journal Article
Genotype-First Approach Identifies an Association between rs28374544/FOG2[sup.S657G] and Liver Disease through Alterations in mTORC1 Signaling
Conlon, Donna M, Kanakala, Siri, Cherlin, Tess, Ko, Yi-An, Vitali, Cecilia, Gurunathan, Sharavana, Venkatesh, Rasika, Woerner, Jakob, Guare, Lindsay A, Biobank, Penn Medicine, Verma, Anurag, Verma, Shefali S, Guerraty, Marie A
Published in Genes (01.08.2024)
Published in Genes (01.08.2024)
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Journal Article
Genome-Wide Association Study of Breast Density among Women of African Ancestry
Verma, Shefali Setia, Guare, Lindsay, Ehsan, Sarah, Gastounioti, Aimilia, Scales, Gabrielle, Ritchie, Marylyn D, Kontos, Despina, McCarthy, Anne Marie, Penn Medicine Biobank
Published in Cancers (16.05.2023)
Published in Cancers (16.05.2023)
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Journal Article
The Penn Medicine BioBank: Towards a Genomics-Enabled Learning Healthcare System to Accelerate Precision Medicine in a Diverse Population
Verma, Anurag, Damrauer, Scott M, Naseer, Nawar, Weaver, JoEllen, Kripke, Colleen M, Guare, Lindsay, Sirugo, Giorgio, Kember, Rachel L, Drivas, Theodore G, Dudek, Scott M, Bradford, Yuki, Lucas, Anastasia, Judy, Renae, Verma, Shefali S, Meagher, Emma, Nathanson, Katherine L, Feldman, Michael, Ritchie, Marylyn D, Rader, Daniel J, For The Penn Medicine BioBank
Published in Journal of personalized medicine (29.11.2022)
Published in Journal of personalized medicine (29.11.2022)
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Abstract 5871: Genome wide association study of breast density among women of African ancestry
Verma, Shefali, Guare, Lindsay, Gastounioti, Aimilia, Ehsan, Sarah, Conant, Emily F., Ritchie, Marylyn, Kontos, Despina, McCarthy, Anne Marie
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
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Journal Article
Genotype-First Approach Identifies an Association between rs28374544/FOG2 S657G and Liver Disease through Alterations in mTORC1 Signaling
Conlon, Donna M, Kanakala, Siri, Cherlin, Tess, Ko, Yi-An, Vitali, Cecilia, Gurunathan, Sharavana, Venkatesh, Rasika, Woerner, Jakob, Guare, Lindsay A, Biobank, Penn Medicine, Verma, Anurag, Verma, Shefali S, Guerraty, Marie A
Published in Genes (21.08.2024)
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Published in Genes (21.08.2024)
Journal Article
DETECT: Feature extraction method for disease trajectory modeling in electronic health records
Singhal, Pankhuri, Guare, Lindsay, Morse, Colleen, Lucas, Anastasia, Byrska-Bishop, Marta, Guerraty, Marie A, Kim, Dokyoon, Ritchie, Marylyn D, Verma, Anurag
Published in AMIA Summits on Translational Science proceedings (2023)
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Published in AMIA Summits on Translational Science proceedings (2023)
Journal Article
Novel ancestry-specific primary open-angle glaucoma loci and shared biology with vascular mechanisms and cell proliferation
Lo Faro, Valeria, Bhattacharya, Arjun, Zhou, Wei, Zhou, Dan, Wang, Ying, Läll, Kristi, Kanai, Masahiro, Lopera-Maya, Esteban, Straub, Peter, Pawar, Priyanka, Tao, Ran, Zhong, Xue, Namba, Shinichi, Sanna, Serena, Nolte, Ilja M., Okada, Yukinori, Ingold, Nathan, MacGregor, Stuart, Snieder, Harold, Surakka, Ida, Shortt, Jonathan, Gignoux, Chris, Rafaels, Nicholas, Crooks, Kristy, Verma, Anurag, Verma, Shefali S., Guare, Lindsay, Rader, Daniel J., Willer, Cristen, Martin, Alicia R., Brantley, Milam A., Gamazon, Eric R., Jansonius, Nomdo M., Joos, Karen, Cox, Nancy J., Hirbo, Jibril
Published in Cell reports. Medicine (20.02.2024)
Published in Cell reports. Medicine (20.02.2024)
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Journal Article
Enhancing Genetic Association Power in Endometriosis through Unsupervised Clustering of Clinical Subtypes Identified from Electronic Health Records
Guare, Lindsay, Humphrey, Leigh Ann, Rush, Margaret, Pollie, Meredith, Luo, Yuan, Weng, Chunhua, Wei, Wei-Qi, Kottyan, Leah, Jarvik, Gail, Elhadad, Noemie, Zondervan, Krina, Missmer, Stacey, Vujkovic, Marijana, Velez-Edwards, Digna, Senapati, Suneeta, Setia-Verma, Shefali
Published in medRxiv : the preprint server for health sciences (22.04.2024)
Published in medRxiv : the preprint server for health sciences (22.04.2024)
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Journal Article
Diversity and Scale: Genetic Architecture of 2,068 Traits in the VA Million Veteran Program
Verma, Anurag, Huffman, Jennifer E, Rodriguez, Alex, Conery, Mitchell, Liu, Molei, Ho, Yuk-Lam, Kim, Youngdae, Heise, David A, Guare, Lindsay, Panickan, Vidul Ayakulangara, Garcon, Helene, Linares, Franciel, Costa, Lauren, Goethert, Ian, Tipton, Ryan, Honerlaw, Jacqueline, Davies, Laura, Whitbourne, Stacey, Cohen, Jeremy, Posner, Daniel C, Sangar, Rahul, Murray, Michael, Wang, Xuan, Dochtermann, Daniel R, Devineni, Poornima, Shi, Yunling, Nandi, Tarak Nath, Assimes, Themistocles L, Brunette, Charles A, Carroll, Robert J, Clifford, Royce, Duvall, Scott, Gelernter, Joel, Hung, Adriana, Iyengar, Sudha K, Joseph, Jacob, Kember, Rachel, Kranzler, Henry, Levey, Daniel, Luoh, Shiuh-Wen, Merritt, Victoria C, Overstreet, Cassie, Deak, Joseph D, Grant, Struan F A, Polimanti, Renato, Roussos, Panos, Sun, Yan V, Venkatesh, Sanan, Voloudakis, Georgios, Justice, Amy, Begoli, Edmon, Ramoni, Rachel, Tourassi, Georgia, Pyarajan, Saiju, Tsao, Philip S, O'Donnell, Christopher J, Muralidhar, Sumitra, Moser, Jennifer, Casas, Juan P, Bick, Alexander G, Zhou, Wei, Cai, Tianxi, Voight, Benjamin F, Cho, Kelly, Gaziano, Michael J, Madduri, Ravi K, Damrauer, Scott M, Liao, Katherine P
Published in medRxiv : the preprint server for health sciences (29.06.2023)
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Published in medRxiv : the preprint server for health sciences (29.06.2023)
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