Knotted artifacts in predicted 3D RNA structures
Gren, Bartosz A, Antczak, Maciej, Zok, Tomasz, Sulkowska, Joanna I, Szachniuk, Marta
Published in PLoS computational biology (20.06.2024)
Published in PLoS computational biology (20.06.2024)
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Journal Article
Conservation of knotted and slipknotted topology in transmembrane transporters
Zayats, Vasilina, Sikora, Maciej, Perlinska, Agata P, Stasiulewicz, Adam, Gren, Bartosz A, Sulkowska, Joanna I
Published in Biophysical journal (05.12.2023)
Published in Biophysical journal (05.12.2023)
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Journal Article
AlphaFold predicts novel human proteins with knots
Perlinska, Agata P., Niemyska, Wanda H., Gren, Bartosz A., Bukowicki, Marek, Nowakowski, Szymon, Rubach, Pawel, Sulkowska, Joanna I.
Published in Protein science (01.05.2023)
Published in Protein science (01.05.2023)
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Journal Article
AlphaKnot: server to analyze entanglement in structures predicted by AlphaFold methods
Niemyska, Wanda, Rubach, Pawel, Gren, Bartosz A, Nguyen, Mai Lan, Garstka, Wojciech, Bruno da Silva, Fernando, Rawdon, Eric J, Sulkowska, Joanna I
Published in Nucleic acids research (05.07.2022)
Published in Nucleic acids research (05.07.2022)
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Journal Article