Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation
Bazin, Jérémie, Baerenfaller, Katja, Gosai, Sager J., Gregory, Brian D., Crespi, Martin, Bailey-Serres, Julia
Published in Proceedings of the National Academy of Sciences - PNAS (14.11.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (14.11.2017)
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Journal Article
Loss of NAD Homeostasis Leads to Progressive and Reversible Degeneration of Skeletal Muscle
Frederick, David W., Loro, Emanuele, Liu, Ling, Davila, Antonio, Chellappa, Karthikeyani, Silverman, Ian M., Quinn, William J., Gosai, Sager J., Tichy, Elisia D., Davis, James G., Mourkioti, Foteini, Gregory, Brian D., Dellinger, Ryan W., Redpath, Philip, Migaud, Marie E., Nakamaru-Ogiso, Eiko, Rabinowitz, Joshua D., Khurana, Tejvir S., Baur, Joseph A.
Published in Cell metabolism (09.08.2016)
Published in Cell metabolism (09.08.2016)
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A MicroRNA Precursor Surveillance System in Quality Control of MicroRNA Synthesis
Liu, Xuhang, Zheng, Qi, Vrettos, Nicholas, Maragkakis, Manolis, Alexiou, Panagiotis, Gregory, Brian D., Mourelatos, Zissimos
Published in Molecular cell (18.09.2014)
Published in Molecular cell (18.09.2014)
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Journal Article
Dysregulation of the epigenetic landscape of normal aging in Alzheimer’s disease
Nativio, Raffaella, Donahue, Greg, Berson, Amit, Lan, Yemin, Amlie-Wolf, Alexandre, Tuzer, Ferit, Toledo, Jon B., Gosai, Sager J., Gregory, Brian D., Torres, Claudio, Trojanowski, John Q., Wang, Li-San, Johnson, F. Brad, Bonini, Nancy M., Berger, Shelley L.
Published in Nature neuroscience (01.04.2018)
Published in Nature neuroscience (01.04.2018)
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Journal Article
Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis
Vourekas, Anastassios, Zheng, Qi, Alexiou, Panagiotis, Maragkakis, Manolis, Kirino, Yohei, Gregory, Brian D, Mourelatos, Zissimos
Published in Nature structural & molecular biology (01.08.2012)
Published in Nature structural & molecular biology (01.08.2012)
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Journal Article
Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond
Lister, Ryan, Gregory, Brian D, Ecker, Joseph R
Published in Current opinion in plant biology (01.04.2009)
Published in Current opinion in plant biology (01.04.2009)
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Journal Article
Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
Lister, Ryan, O'Malley, Ronan C., Tonti-Filippini, Julian, Gregory, Brian D., Berry, Charles C., Millar, A. Harvey, Ecker, Joseph R.
Published in Cell (02.05.2008)
Published in Cell (02.05.2008)
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Journal Article
Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape
Shah, Parisha P, Donahue, Greg, Otte, Gabriel L, Capell, Brian C, Nelson, David M, Cao, Kajia, Aggarwala, Varun, Cruickshanks, Hazel A, Rai, Taranjit Singh, McBryan, Tony, Gregory, Brian D, Adams, Peter D, Berger, Shelley L
Published in Genes & development (15.08.2013)
Published in Genes & development (15.08.2013)
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Journal Article
The Conservation and Function of RNA Secondary Structure in Plants
Vandivier, Lee E, Anderson, Stephen J, Foley, Shawn W, Gregory, Brian D
Published in Annual review of plant biology (29.04.2016)
Published in Annual review of plant biology (29.04.2016)
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Journal Article
Detection of Pol IV/RDR2-dependent transcripts at the genomic scale in Arabidopsis reveals features and regulation of siRNA biogenesis
Li, Shaofang, Vandivier, Lee E, Tu, Bin, Gao, Lei, Won, So Youn, Li, Shengben, Zheng, Binglian, Gregory, Brian D, Chen, Xuemei
Published in Genome research (01.02.2015)
Published in Genome research (01.02.2015)
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Journal Article
H3K36 methylation promotes longevity by enhancing transcriptional fidelity
Sen, Payel, Dang, Weiwei, Donahue, Greg, Dai, Junbiao, Dorsey, Jean, Cao, Xiaohua, Liu, Wei, Cao, Kajia, Perry, Rocco, Lee, Jun Yeop, Wasko, Brian M, Carr, Daniel T, He, Chong, Robison, Brett, Wagner, John, Gregory, Brian D, Kaeberlein, Matt, Kennedy, Brian K, Boeke, Jef D, Berger, Shelley L
Published in Genes & development (01.07.2015)
Published in Genes & development (01.07.2015)
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Journal Article
Global Analysis of the RNA-Protein Interaction and RNA Secondary Structure Landscapes of the Arabidopsis Nucleus
Gosai, Sager J., Foley, Shawn W., Wang, Dongxue, Silverman, Ian M., Selamoglu, Nur, Nelson, Andrew D.L., Beilstein, Mark A., Daldal, Fevzi, Deal, Roger B., Gregory, Brian D.
Published in Molecular cell (22.01.2015)
Published in Molecular cell (22.01.2015)
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Journal Article
Impact of poly(A)-tail G-content on Arabidopsis PAB binding and their role in enhancing translational efficiency
Zhao, Taolan, Huan, Qing, Sun, Jing, Liu, Chunyan, Hou, Xiuli, Yu, Xiang, Silverman, Ian M, Zhang, Yi, Gregory, Brian D, Liu, Chun-Ming, Qian, Wenfeng, Cao, Xiaofeng
Published in Genome Biology (03.09.2019)
Published in Genome Biology (03.09.2019)
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Journal Article
Transfer learning enables identification of multiple types of RNA modifications using nanopore direct RNA sequencing
Wu, You, Shao, Wenna, Yan, Mengxiao, Wang, Yuqin, Xu, Pengfei, Huang, Guoqiang, Li, Xiaofei, Gregory, Brian D., Yang, Jun, Wang, Hongxia, Yu, Xiang
Published in Nature communications (14.05.2024)
Published in Nature communications (14.05.2024)
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Journal Article
Transformation of the intestinal epithelium by the MSI2 RNA-binding protein
Wang, Shan, Li, Ning, Yousefi, Maryam, Nakauka-Ddamba, Angela, Li, Fan, Parada, Kimberly, Rao, Shilpa, Minuesa, Gerard, Katz, Yarden, Gregory, Brian D., Kharas, Michael G., Yu, Zhengquan, Lengner, Christopher J.
Published in Nature communications (16.03.2015)
Published in Nature communications (16.03.2015)
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Journal Article
DASHR: database of small human noncoding RNAs
Leung, Yuk Yee, Kuksa, Pavel P, Amlie-Wolf, Alexandre, Valladares, Otto, Ungar, Lyle H, Kannan, Sampath, Gregory, Brian D, Wang, Li-San
Published in Nucleic acids research (04.01.2016)
Published in Nucleic acids research (04.01.2016)
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Journal Article
The Macronuclear Genome of Stentor coeruleus Reveals Tiny Introns in a Giant Cell
Slabodnick, Mark M., Ruby, J. Graham, Reiff, Sarah B., Swart, Estienne C., Gosai, Sager, Prabakaran, Sudhakaran, Witkowska, Ewa, Larue, Graham E., Fisher, Susan, Freeman, Robert M., Gunawardena, Jeremy, Chu, William, Stover, Naomi A., Gregory, Brian D., Nowacki, Mariusz, Derisi, Joseph, Roy, Scott W., Marshall, Wallace F., Sood, Pranidhi
Published in Current biology (20.02.2017)
Published in Current biology (20.02.2017)
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Journal Article
HAMR: high-throughput annotation of modified ribonucleotides
Ryvkin, Paul, Leung, Yuk Yee, Silverman, Ian M, Childress, Micah, Valladares, Otto, Dragomir, Isabelle, Gregory, Brian D, Wang, Li-San
Published in RNA (Cambridge) (01.12.2013)
Published in RNA (Cambridge) (01.12.2013)
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