Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome
Kim, Tae Hoon, Abdullaev, Ziedulla K., Smith, Andrew D., Ching, Keith A., Loukinov, Dmitri I., Green, Roland D., Zhang, Michael Q., Lobanenkov, Victor V., Ren, Bing
Published in Cell (23.03.2007)
Published in Cell (23.03.2007)
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Histone modifications at human enhancers reflect global cell-type-specific gene expression
Ren, Bing, Heintzman, Nathaniel D, Hon, Gary C, Hawkins, R. David, Kheradpour, Pouya, Stark, Alexander, Harp, Lindsey F, Ye, Zhen, Lee, Leonard K, Stuart, Rhona K, Ching, Christina W, Ching, Keith A, Antosiewicz-Bourget, Jessica E, Liu, Hui, Zhang, Xinmin, Green, Roland D, Lobanenkov, Victor V, Stewart, Ron, Thomson, James A, Crawford, Gregory E, Kellis, Manolis
Published in Nature (07.05.2009)
Published in Nature (07.05.2009)
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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
Ren, Bing, Heintzman, Nathaniel D, Stuart, Rhona K, Hon, Gary, Fu, Yutao, Ching, Christina W, Hawkins, R David, Barrera, Leah O, Van Calcar, Sara, Qu, Chunxu, Ching, Keith A, Wang, Wei, Weng, Zhiping, Green, Roland D, Crawford, Gregory E
Published in Nature genetics (01.03.2007)
Published in Nature genetics (01.03.2007)
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Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements
Dostie, Josée, Richmond, Todd A, Arnaout, Ramy A, Selzer, Rebecca R, Lee, William L, Honan, Tracey A, Rubio, Eric D, Krumm, Anton, Lamb, Justin, Nusbaum, Chad, Green, Roland D, Dekker, Job
Published in Genome Research (01.10.2006)
Published in Genome Research (01.10.2006)
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Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation
KIRMIZIS, Antonis, SANTOS-ROSA, Helena, PENKETT, Christopher J, SINGER, Michael A, VERMEULEN, Michiel, MANN, Matthias, BÄHLER, Jürg, GREEN, Roland D, KOUZARIDES, Tony
Published in Nature (18.10.2007)
Published in Nature (18.10.2007)
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A high-resolution map of active promoters in the human genome
Ren, Bing, Kim, Tae Hoon, Barrera, Leah O, Zheng, Ming, Qu, Chunxu, Singer, Michael A, Richmond, Todd A, Wu, Yingnian, Green, Roland D
Published in Nature (11.08.2005)
Published in Nature (11.08.2005)
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Comparative isoschizomer profiling of cytosine methylation: the HELP assay
Khulan, Batbayar, Thompson, Reid F, Ye, Kenny, Fazzari, Melissa J, Suzuki, Masako, Stasiek, Edyta, Figueroa, Maria E, Glass, Jacob L, Chen, Quan, Montagna, Cristina, Hatchwell, Eli, Selzer, Rebecca R, Richmond, Todd A, Green, Roland D, Melnick, Ari, Greally, John M
Published in Genome Research (01.08.2006)
Published in Genome Research (01.08.2006)
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Dynamic histone H3 epigenome marking during the intraerythrocytic cycle of Plasmodium falciparum
Salcedo-Amaya, Adriana M, van Driel, Marc A, Alako, Blaise T, Trelle, Morten B, van den Elzen, Antonia M.G, Cohen, Adrian M, Janssen-Megens, Eva M, van de Vegte-Bolmer, Marga, Selzer, Rebecca R, Iniguez, A. Leonardo, Green, Roland D, Sauerwein, Robert W, Jensen, Ole N, Stunnenberg, Hendrik G
Published in Proceedings of the National Academy of Sciences - PNAS (16.06.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (16.06.2009)
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Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays
Stamatoyannopoulos, John A, Sabo, Peter J, Kuehn, Michael S, Thurman, Robert, Johnson, Brett E, Johnson, Ericka M, Cao, Hua, Yu, Man, Rosenzweig, Elizabeth, Goldy, Jeff, Haydock, Andrew, Weaver, Molly, Shafer, Anthony, Lee, Kristin, Neri, Fidencio, Humbert, Richard, Singer, Michael A, Richmond, Todd A, Dorschner, Michael O, McArthur, Michael, Hawrylycz, Michael, Green, Roland D, Navas, Patrick A, Noble, William S
Published in Nature methods (01.07.2006)
Published in Nature methods (01.07.2006)
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Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency
Hawkins, R David, Hon, Gary C, Yang, Chuhu, Antosiewicz-Bourget, Jessica E, Lee, Leonard K, Ngo, Que-Minh, Klugman, Sarit, Ching, Keith A, Edsall, Lee E, Ye, Zhen, Kuan, Samantha, Yu, Pengzhi, Liu, Hui, Zhang, Xinmin, Green, Roland D, Lobanenkov, Victor V, Stewart, Ron, Thomson, James A, Ren, Bing
Published in Cell research (01.10.2011)
Published in Cell research (01.10.2011)
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Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH
Selzer, Rebecca R., Richmond, Todd A., Pofahl, Nathan J., Green, Roland D., Eis, Peggy S., Nair, Prakash, Brothman, Arthur R., Stallings, Raymond L.
Published in Genes chromosomes & cancer (01.11.2005)
Published in Genes chromosomes & cancer (01.11.2005)
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Mutation discovery in bacterial genomes: metronidazole resistance in Helicobacter pylori
Albert, Thomas J, Berg, Douglas E, Dailidiene, Daiva, Dailide, Giedrius, Norton, Jason E, Kalia, Awdhesh, Richmond, Todd A, Molla, Michael, Singh, Jaz, Green, Roland D
Published in Nature methods (01.12.2005)
Published in Nature methods (01.12.2005)
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An integrative genomic and epigenomic approach for the study of transcriptional regulation
Figueroa, Maria E, Reimers, Mark, Thompson, Reid F, Ye, Kenny, Li, Yushan, Selzer, Rebecca R, Fridriksson, Jakob, Paietta, Elisabeth, Wiernik, Peter, Green, Roland D, Greally, John M, Melnick, Ari
Published in PloS one (26.03.2008)
Published in PloS one (26.03.2008)
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Gene expression analysis using oligonucleotide arrays produced by maskless photolithography
Nuwaysir, Emile F, Huang, Wei, Albert, Thomas J, Singh, Jaz, Nuwaysir, Kate, Pitas, Alan, Richmond, Todd, Gorski, Tom, Berg, James P, Ballin, Jeff, McCormick, Mark, Norton, Jason, Pollock, Tim, Sumwalt, Terry, Butcher, Lawrence, Porter, DeAnn, Molla, Michael, Hall, Christine, Blattner, Fred, Sussman, Michael R, Wallace, Rodney L, Cerrina, Franco, Green, Roland D
Published in Genome research (01.11.2002)
Published in Genome research (01.11.2002)
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SNP-specific array-based allele-specific expression analysis
Bjornsson, Hans T, Albert, Thomas J, Ladd-Acosta, Christine M, Green, Roland D, Rongione, Michael A, Middle, Christina M, Irizarry, Rafael A, Broman, Karl W, Feinberg, Andrew P
Published in Genome Research (01.05.2008)
Published in Genome Research (01.05.2008)
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ChIP-chip designs to interrogate the genome of Xenopus embryos for transcription factor binding and epigenetic regulation
Akkers, Robert C, van Heeringen, Simon J, Manak, J Robert, Green, Roland D, Stunnenberg, Hendrik G, Veenstra, Gert Jan C
Published in PloS one (21.01.2010)
Published in PloS one (21.01.2010)
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