Saturated Reconstruction of a Volume of Neocortex
Kasthuri, Narayanan, Hayworth, Kenneth Jeffrey, Berger, Daniel Raimund, Schalek, Richard Lee, Conchello, José Angel, Knowles-Barley, Seymour, Lee, Dongil, Vázquez-Reina, Amelio, Kaynig, Verena, Jones, Thouis Raymond, Roberts, Mike, Morgan, Josh Lyskowski, Tapia, Juan Carlos, Seung, H. Sebastian, Roncal, William Gray, Vogelstein, Joshua Tzvi, Burns, Randal, Sussman, Daniel Lewis, Priebe, Carey Eldin, Pfister, Hanspeter, Lichtman, Jeff William
Published in Cell (30.07.2015)
Published in Cell (30.07.2015)
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Vogelstein, Joshua T., Perlman, Eric, Falk, Benjamin, Baden, Alex, Gray Roncal, William, Chandrashekhar, Vikram, Collman, Forrest, Seshamani, Sharmishtaa, Patsolic, Jesse L., Lillaney, Kunal, Kazhdan, Michael, Hider, Robert, Pryor, Derek, Matelsky, Jordan, Gion, Timothy, Manavalan, Priya, Wester, Brock, Chevillet, Mark, Trautman, Eric T., Khairy, Khaled, Bridgeford, Eric, Kleissas, Dean M., Tward, Daniel J., Crow, Ailey K., Hsueh, Brian, Wright, Matthew A., Miller, Michael I., Smith, Stephen J., Vogelstein, R. Jacob, Deisseroth, Karl, Burns, Randal
Published in Nature methods (01.11.2018)
Published in Nature methods (01.11.2018)
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Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis
Carass, Aaron, Roy, Snehashis, Gherman, Adrian, Reinhold, Jacob C., Jesson, Andrew, Arbel, Tal, Maier, Oskar, Handels, Heinz, Ghafoorian, Mohsen, Platel, Bram, Birenbaum, Ariel, Greenspan, Hayit, Pham, Dzung L., Crainiceanu, Ciprian M., Calabresi, Peter A., Prince, Jerry L., Roncal, William R. Gray, Shinohara, Russell T., Oguz, Ipek
Published in Scientific reports (19.05.2020)
Published in Scientific reports (19.05.2020)
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A three-dimensional thalamocortical dataset for characterizing brain heterogeneity
Prasad, Judy A., Balwani, Aishwarya H., Johnson, Erik C., Miano, Joseph D., Sampathkumar, Vandana, De Andrade, Vincent, Fezzaa, Kamel, Du, Ming, Vescovi, Rafael, Jacobsen, Chris, Kording, Konrad P., Gürsoy, Doga, Gray Roncal, William, Kasthuri, Narayanan, Dyer, Eva L.
Published in Scientific data (20.10.2020)
Published in Scientific data (20.10.2020)
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Neural Reconstruction Integrity: A Metric for Assessing the Connectivity Accuracy of Reconstructed Neural Networks
Reilly, Elizabeth P, Garretson, Jeffrey S, Gray Roncal, William R, Kleissas, Dean M, Wester, Brock A, Chevillet, Mark A, Roos, Matthew J
Published in Frontiers in neuroinformatics (05.11.2018)
Published in Frontiers in neuroinformatics (05.11.2018)
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Toward a scalable framework for reproducible processing of volumetric, nanoscale neuroimaging datasets
Johnson, Erik C, Wilt, Miller, Rodriguez, Luis M, Norman-Tenazas, Raphael, Rivera, Corban, Drenkow, Nathan, Kleissas, Dean, LaGrow, Theodore J, Cowley, Hannah P, Downs, Joseph, K. Matelsky, Jordan, J. Hughes, Marisa, P. Reilly, Elizabeth, A. Wester, Brock, L. Dyer, Eva, P. Kording, Konrad, R. Gray-Roncal, William
Published in Gigascience (21.12.2020)
Published in Gigascience (21.12.2020)
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An automated images-to-graphs framework for high resolution connectomics
Gray Roncal, William R, Kleissas, Dean M, Vogelstein, Joshua T, Manavalan, Priya, Lillaney, Kunal, Pekala, Michael, Burns, Randal, Vogelstein, R Jacob, Priebe, Carey E, Chevillet, Mark A, Hager, Gregory D
Published in Frontiers in neuroinformatics (13.08.2015)
Published in Frontiers in neuroinformatics (13.08.2015)
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DotMotif: an open-source tool for connectome subgraph isomorphism search and graph queries
Matelsky, Jordan K., Reilly, Elizabeth P., Johnson, Erik C., Stiso, Jennifer, Bassett, Danielle S., Wester, Brock A., Gray-Roncal, William
Published in Scientific reports (22.06.2021)
Published in Scientific reports (22.06.2021)
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Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics
Bridgeford, Eric W, Wang, Shangsi, Wang, Zeyi, Xu, Ting, Craddock, Cameron, Dey, Jayanta, Kiar, Gregory, Gray-Roncal, William, Colantuoni, Carlo, Douville, Christopher, Noble, Stephanie, Priebe, Carey E, Caffo, Brian, Milham, Michael, Zuo, Xi-Nian, Vogelstein, Joshua T
Published in PLoS computational biology (01.09.2021)
Published in PLoS computational biology (01.09.2021)
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A framework for rigorous evaluation of human performance in human and machine learning comparison studies
Cowley, Hannah P., Natter, Mandy, Gray-Roncal, Karla, Rhodes, Rebecca E., Johnson, Erik C., Drenkow, Nathan, Shead, Timothy M., Chance, Frances S., Wester, Brock, Gray-Roncal, William
Published in Scientific reports (31.03.2022)
Published in Scientific reports (31.03.2022)
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Online learning for orientation estimation during translation in an insect ring attractor network
Robinson, Brian S., Norman-Tenazas, Raphael, Cervantes, Martha, Symonette, Danilo, Johnson, Erik C., Joyce, Justin, Rivlin, Patricia K., Hwang, Grace M., Zhang, Kechen, Gray-Roncal, William
Published in Scientific reports (25.02.2022)
Published in Scientific reports (25.02.2022)
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Using machine learning on clinical data to identify unexpected patterns in groups of COVID-19 patients
Cowley, Hannah Paris, Robinette, Michael S., Matelsky, Jordan K., Xenes, Daniel, Kashyap, Aparajita, Ibrahim, Nabeela F., Robinson, Matthew L., Zeger, Scott, Garibaldi, Brian T., Gray-Roncal, William
Published in Scientific reports (08.02.2023)
Published in Scientific reports (08.02.2023)
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Author Correction: A framework for rigorous evaluation of human performance in human and machine learning comparison studies
Cowley, Hannah P., Natter, Mandy, Gray-Roncal, Karla, Rhodes, Rebecca E., Johnson, Erik C., Drenkow, Nathan, Shead, Timothy M., Chance, Frances S., Wester, Brock, Gray-Roncal, William
Published in Scientific reports (07.07.2022)
Published in Scientific reports (07.07.2022)
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Journal Article
Author Correction: Online learning for orientation estimation during translation in an insect ring attractor network
Robinson, Brian S., Norman-Tenazas, Raphael, Cervantes, Martha, Symonette, Danilo, Johnson, Erik C., Joyce, Justin, Rivlin, Patricia K., Hwang, Grace M., Zhang, Kechen, Gray-Roncal, William
Published in Scientific reports (18.03.2022)
Published in Scientific reports (18.03.2022)
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Quantifying Mesoscale Neuroanatomy Using X-Ray Microtomography
Dyer, Eva L, Gray Roncal, William, Prasad, Judy A, Fernandes, Hugo L, Gürsoy, Doga, De Andrade, Vincent, Fezzaa, Kamel, Xiao, Xianghui, Vogelstein, Joshua T, Jacobsen, Chris, Körding, Konrad P, Kasthuri, Narayanan
Published in eNeuro (01.09.2017)
Published in eNeuro (01.09.2017)
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The Brain Observatory Storage Service and Database (BossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery
Hider, Jr, Robert, Kleissas, Dean, Gion, Timothy, Xenes, Daniel, Matelsky, Jordan, Pryor, Derek, Rodriguez, Luis, Johnson, Erik C, Gray-Roncal, William, Wester, Brock
Published in Frontiers in neuroinformatics (15.02.2022)
Published in Frontiers in neuroinformatics (15.02.2022)
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Benchmarking Human Performance for Visual Search of Aerial Images
Rhodes, Rebecca E, Cowley, Hannah P, Huang, Jay G, Gray-Roncal, William, Wester, Brock A, Drenkow, Nathan
Published in Frontiers in psychology (14.12.2021)
Published in Frontiers in psychology (14.12.2021)
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Transfer Learning Analysis of Image Processing Workflows for Electron Microscopy Datasets
Johnson, Erik C., Rodriguez, Luis M., Norman-Tenazas, Raphael, Xenes, Daniel, Gray-Roncal, William R.
Published in 2019 53rd Asilomar Conference on Signals, Systems, and Computers (01.11.2019)
Published in 2019 53rd Asilomar Conference on Signals, Systems, and Computers (01.11.2019)
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