Integrating protein structural dynamics and evolutionary analysis with Bio3D
Skjærven, Lars, Yao, Xin-Qiu, Scarabelli, Guido, Grant, Barry J
Published in BMC bioinformatics (10.12.2014)
Published in BMC bioinformatics (10.12.2014)
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Journal Article
Novel allosteric sites on Ras for lead generation
Grant, Barry J, Lukman, Suryani, Hocker, Harrison J, Sayyah, Jaqueline, Brown, Joan Heller, McCammon, J Andrew, Gorfe, Alemayehu A
Published in PloS one (25.10.2011)
Published in PloS one (25.10.2011)
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Journal Article
Large conformational changes in proteins: signaling and other functions
Grant, Barry J, Gorfe, Alemayehu A, McCammon, J Andrew
Published in Current opinion in structural biology (01.04.2010)
Published in Current opinion in structural biology (01.04.2010)
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Journal Article
Rapid Characterization of Allosteric Networks with Ensemble Normal Mode Analysis
Yao, Xin-Qiu, Skjærven, Lars, Grant, Barry J
Published in The journal of physical chemistry. B (25.08.2016)
Published in The journal of physical chemistry. B (25.08.2016)
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Journal Article
Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire
Ostrov, David A, Grant, Barry J, Pompeu, Yuri A, Sidney, John, Harndahl, Mikkel, Southwood, Scott, Oseroff, Carla, Lu, Shun, Jakoncic, Jean, de Oliveira, Cesar Augusto F, Yang, Lun, Mei, Hu, Shi, Leming, Shabanowitz, Jeffrey, English, A. Michelle, Wriston, Amanda, Lucas, Andrew, Phillips, Elizabeth, Mallal, Simon, Grey, Howard M, Sette, Alessandro, Hunt, Donald F, Buus, Soren, Peters, Bjoern
Published in Proceedings of the National Academy of Sciences - PNAS (19.06.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (19.06.2012)
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Journal Article
Bio3d: an R package for the comparative analysis of protein structures
Grant, Barry J., Rodrigues, Ana P. C., ElSawy, Karim M., McCammon, J. Andrew, Caves, Leo S. D.
Published in Bioinformatics (01.11.2006)
Published in Bioinformatics (01.11.2006)
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Journal Article
Computational and biochemical characterization of two partially overlapping interfaces and multiple weak-affinity K-Ras dimers
Prakash, Priyanka, Sayyed-Ahmad, Abdallah, Cho, Kwang-Jin, Dolino, Drew M, Chen, Wei, Li, Hongyang, Grant, Barry J, Hancock, John F, Gorfe, Alemayehu A
Published in Scientific reports (09.01.2017)
Published in Scientific reports (09.01.2017)
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Journal Article
Online interactive analysis of protein structure ensembles with Bio3D-web
Skjærven, Lars, Jariwala, Shashank, Yao, Xin-Qiu, Grant, Barry J
Published in Bioinformatics (Oxford, England) (15.11.2016)
Published in Bioinformatics (Oxford, England) (15.11.2016)
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Journal Article
Mapping the Nucleotide and Isoform-Dependent Structural and Dynamical Features of Ras Proteins
Gorfe, Alemayehu A., Grant, Barry J., McCammon, J. Andrew
Published in Structure (London) (01.06.2008)
Published in Structure (London) (01.06.2008)
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Journal Article
Structural and Molecular Mechanisms of Cytokine-Mediated Endocrine Resistance in Human Breast Cancer Cells
Stender, Joshua D., Nwachukwu, Jerome C., Kastrati, Irida, Kim, Yohan, Strid, Tobias, Yakir, Maayan, Srinivasan, Sathish, Nowak, Jason, Izard, Tina, Rangarajan, Erumbi S., Carlson, Kathryn E., Katzenellenbogen, John A., Yao, Xin-Qiu, Grant, Barry J., Leong, Hon S., Lin, Chin-Yo, Frasor, Jonna, Nettles, Kendall W., Glass, Christopher K.
Published in Molecular cell (16.03.2017)
Published in Molecular cell (16.03.2017)
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Journal Article
The distinct conformational dynamics of K-Ras and H-Ras A59G
Lukman, Suryani, Grant, Barry J, Gorfe, Alemayehu A, Grant, Guy H, McCammon, J Andrew
Published in PLoS computational biology (09.09.2010)
Published in PLoS computational biology (09.09.2010)
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Journal Article
Comparative Protein Structure Analysis with Bio3D-Web
Grant, Barry J, Skjærven, Lars, Yao, Xin-Qiu
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2020)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2020)
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Journal Article
Dynamic Coupling and Allosteric Networks in the α Subunit of Heterotrimeric G Proteins
Yao, Xin-Qiu, Malik, Rabia U., Griggs, Nicholas W., Skjærven, Lars, Traynor, John R., Sivaramakrishnan, Sivaraj, Grant, Barry J.
Published in The Journal of biological chemistry (26.02.2016)
Published in The Journal of biological chemistry (26.02.2016)
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