Insights Into the Pathophysiology of Esophageal Adenocarcinoma
Quante, Michael, Graham, Trevor A., Jansen, Marnix
Published in Gastroenterology (New York, N.Y. 1943) (01.01.2018)
Published in Gastroenterology (New York, N.Y. 1943) (01.01.2018)
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Journal Article
Identification of neutral tumor evolution across cancer types
Williams, Marc J, Werner, Benjamin, Barnes, Chris P, Graham, Trevor A, Sottoriva, Andrea
Published in Nature genetics (01.03.2016)
Published in Nature genetics (01.03.2016)
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Journal Article
Pan-cancer analysis of the extent and consequences of intratumor heterogeneity
Andor, Noemi, Graham, Trevor A, Jansen, Marnix, Xia, Li C, Aktipis, C Athena, Petritsch, Claudia, Ji, Hanlee P, Maley, Carlo C
Published in Nature medicine (01.01.2016)
Published in Nature medicine (01.01.2016)
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Journal Article
Detecting repeated cancer evolution from multi-region tumor sequencing data
Caravagna, Giulio, Giarratano, Ylenia, Ramazzotti, Daniele, Tomlinson, Ian, Graham, Trevor A, Sanguinetti, Guido, Sottoriva, Andrea
Published in Nature methods (01.09.2018)
Published in Nature methods (01.09.2018)
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Journal Article
Quantification of subclonal selection in cancer from bulk sequencing data
Williams, Marc J, Werner, Benjamin, Heide, Timon, Curtis, Christina, Barnes, Chris P, Sottoriva, Andrea, Graham, Trevor A
Published in Nature genetics (01.06.2018)
Published in Nature genetics (01.06.2018)
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Journal Article
A Big Bang model of human colorectal tumor growth
Sottoriva, Andrea, Kang, Haeyoun, Ma, Zhicheng, Graham, Trevor A, Salomon, Matthew P, Zhao, Junsong, Marjoram, Paul, Siegmund, Kimberly, Press, Michael F, Shibata, Darryl, Curtis, Christina
Published in Nature genetics (01.03.2015)
Published in Nature genetics (01.03.2015)
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Journal Article
Krt19+/Lgr5− Cells Are Radioresistant Cancer-Initiating Stem Cells in the Colon and Intestine
Asfaha, Samuel, Hayakawa, Yoku, Muley, Ashlesha, Stokes, Sarah, Graham, Trevor A., Ericksen, Russell E., Westphalen, Christoph B., von Burstin, Johannes, Mastracci, Teresa L., Worthley, Daniel L., Guha, Chandhan, Quante, Michael, Rustgi, Anil K., Wang, Timothy C.
Published in Cell stem cell (04.06.2015)
Published in Cell stem cell (04.06.2015)
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Journal Article
Spatially constrained tumour growth affects the patterns of clonal selection and neutral drift in cancer genomic data
Chkhaidze, Ketevan, Heide, Timon, Werner, Benjamin, Williams, Marc J, Huang, Weini, Caravagna, Giulio, Graham, Trevor A, Sottoriva, Andrea
Published in PLoS computational biology (01.07.2019)
Published in PLoS computational biology (01.07.2019)
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Journal Article
Genomic profiling reveals spatial intra-tumor heterogeneity in follicular lymphoma
Araf, Shamzah, Wang, Jun, Korfi, Koorosh, Pangault, Celine, Kotsiou, Eleni, Rio-Machin, Ana, Rahim, Tahrima, Heward, James, Clear, Andrew, Iqbal, Sameena, Davies, Jeff K, Johnson, Peter, Calaminici, Maria, Montoto, Silvia, Auer, Rebecca, Chelala, Claude, Gribben, John G, Graham, Trevor A, Fest, Thierry, Fitzgibbon, Jude, Okosun, Jessica
Published in Leukemia (01.05.2018)
Published in Leukemia (01.05.2018)
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Journal Article
Measuring Clonal Evolution in Cancer with Genomics
Williams, Marc J, Sottoriva, Andrea, Graham, Trevor A
Published in Annual review of genomics and human genetics (31.08.2019)
Published in Annual review of genomics and human genetics (31.08.2019)
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Journal Article
The mutational signatures of formalin fixation on the human genome
Guo, Qingli, Lakatos, Eszter, Bakir, Ibrahim Al, Curtius, Kit, Graham, Trevor A, Mustonen, Ville
Published in Nature communications (06.09.2022)
Published in Nature communications (06.09.2022)
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Journal Article
Between-region genetic divergence reflects the mode and tempo of tumor evolution
Sun, Ruping, Hu, Zheng, Sottoriva, Andrea, Graham, Trevor A, Harpak, Arbel, Ma, Zhicheng, Fischer, Jared M, Shibata, Darryl, Curtis, Christina
Published in Nature genetics (01.07.2017)
Published in Nature genetics (01.07.2017)
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Journal Article
Classifying the evolutionary and ecological features of neoplasms
Maley, Carlo C, Aktipis, Athena, Graham, Trevor A, Sottoriva, Andrea, Boddy, Amy M, Janiszewska, Michalina, Silva, Ariosto S, Gerlinger, Marco, Yuan, Yinyin, Pienta, Kenneth J, Anderson, Karen S, Gatenby, Robert, Swanton, Charles, Posada, David, Wu, Chung-I, Schiffman, Joshua D, Hwang, E Shelley, Polyak, Kornelia, Anderson, Alexander R A, Brown, Joel S, Greaves, Mel, Shibata, Darryl
Published in Nature reviews. Cancer (01.10.2017)
Published in Nature reviews. Cancer (01.10.2017)
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Journal Article
Forty-Year Analysis of Colonoscopic Surveillance Program for Neoplasia in Ulcerative Colitis: An Updated Overview
Choi, Chang-Ho Ryan, Rutter, Matthew D, Askari, Alan, Lee, Gui Han, Warusavitarne, Janindra, Moorghen, Morgan, Thomas-Gibson, Siwan, Saunders, Brian P, Graham, Trevor A, Hart, Ailsa L
Published in The American journal of gastroenterology (01.07.2015)
Published in The American journal of gastroenterology (01.07.2015)
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Journal Article
Subclonal reconstruction of tumors by using machine learning and population genetics
Caravagna, Giulio, Heide, Timon, Williams, Marc J, Zapata, Luis, Nichol, Daniel, Chkhaidze, Ketevan, Cross, William, Cresswell, George D, Werner, Benjamin, Acar, Ahmet, Chesler, Louis, Barnes, Chris P, Sanguinetti, Guido, Graham, Trevor A, Sottoriva, Andrea
Published in Nature genetics (01.09.2020)
Published in Nature genetics (01.09.2020)
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Journal Article
NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline
Schenck, Ryan O, Lakatos, Eszter, Gatenbee, Chandler, Graham, Trevor A, Anderson, Alexander R A
Published in BMC bioinformatics (22.05.2019)
Published in BMC bioinformatics (22.05.2019)
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Journal Article