Promises and pitfalls of using high‐throughput sequencing for diet analysis
Alberdi, Antton, Aizpurua, Ostaizka, Bohmann, Kristine, Gopalakrishnan, Shyam, Lynggaard, Christina, Nielsen, Martin, Gilbert, Marcus Thomas Pius
Published in Molecular ecology resources (01.03.2019)
Published in Molecular ecology resources (01.03.2019)
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Journal Article
An Anthropocene map of genetic diversity
Miraldo, Andreia, Li, Sen, Borregaard, Michael K., Flórez-Rodríguez, Alexander, Gopalakrishnan, Shyam, Rizvanovic, Mirnesa, Wang, Zhiheng, Rahbek, Carsten, Marske, Katharine A., Nogués-Bravo, David
Published in Science (American Association for the Advancement of Science) (30.09.2016)
Published in Science (American Association for the Advancement of Science) (30.09.2016)
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Journal Article
Single‐tube library preparation for degraded DNA
Carøe, Christian, Gopalakrishnan, Shyam, Vinner, Lasse, Mak, Sarah S. T., Sinding, Mikkel Holger S., Samaniego, José A., Wales, Nathan, Sicheritz‐Pontén, Thomas, Gilbert, M. Thomas P., Johnston, Susan
Published in Methods in ecology and evolution (01.02.2018)
Published in Methods in ecology and evolution (01.02.2018)
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Journal Article
Genome-wide association study of behavioral, physiological and gene expression traits in outbred CFW mice
Parker, Clarissa C, Gopalakrishnan, Shyam, Carbonetto, Peter, Gonzales, Natalia M, Leung, Emily, Park, Yeonhee J, Aryee, Emmanuel, Davis, Joe, Blizard, David A, Ackert-Bicknell, Cheryl L, Lionikas, Arimantas, Pritchard, Jonathan K, Palmer, Abraham A
Published in Nature genetics (01.08.2016)
Published in Nature genetics (01.08.2016)
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Journal Article
Holo-Omics: Integrated Host-Microbiota Multi-omics for Basic and Applied Biological Research
Nyholm, Lasse, Koziol, Adam, Marcos, Sofia, Botnen, Amanda Bolt, Aizpurua, Ostaizka, Gopalakrishnan, Shyam, Limborg, Morten T., Gilbert, M.Thomas P., Alberdi, Antton
Published in iScience (21.08.2020)
Published in iScience (21.08.2020)
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Journal Article
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, Madeleine, Hansen, Martin, Forberg, Torunn, Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten, Limborg, Morten Tønsberg
Published in Microbiome (30.01.2022)
Published in Microbiome (30.01.2022)
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Journal Article
Mapping of Craniofacial Traits in Outbred Mice Identifies Major Developmental Genes Involved in Shape Determination
Pallares, Luisa F, Carbonetto, Peter, Gopalakrishnan, Shyam, Parker, Clarissa C, Ackert-Bicknell, Cheryl L, Palmer, Abraham A, Tautz, Diethard
Published in PLoS genetics (01.11.2015)
Published in PLoS genetics (01.11.2015)
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Journal Article
The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics
Gopalakrishnan, Shyam, Samaniego Castruita, Jose A, Sinding, Mikkel-Holger S, Kuderna, Lukas F K, Räikkönen, Jannikke, Petersen, Bent, Sicheritz-Ponten, Thomas, Larson, Greger, Orlando, Ludovic, Marques-Bonet, Tomas, Hansen, Anders J, Dalén, Love, Gilbert, M Thomas P
Published in BMC genomics (29.06.2017)
Published in BMC genomics (29.06.2017)
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Journal Article
Global stability analysis of flow through a fusiform aneurysm: steady flows
Gopalakrishnan, Shyam Sunder, Pier, Benoît, Biesheuvel, Arie
Published in Journal of fluid mechanics (10.08.2014)
Published in Journal of fluid mechanics (10.08.2014)
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Journal Article
Hybridization between two high Arctic cetaceans confirmed by genomic analysis
Skovrind, Mikkel, Castruita, Jose Alfredo Samaniego, Haile, James, Treadaway, Eve C, Gopalakrishnan, Shyam, Westbury, Michael V, Heide-Jørgensen, Mads Peter, Szpak, Paul, Lorenzen, Eline D
Published in Scientific reports (20.06.2019)
Published in Scientific reports (20.06.2019)
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Journal Article
Pervasive Phylogenomic Incongruence Underlies Evolutionary Relationships in Eyebrights (Euphrasia, Orobanchaceae)
Garrett, Phen, Becher, Hannes, Gussarova, Galina, dePamphilis, Claude W., Ness, Rob W., Gopalakrishnan, Shyam, Twyford, Alex D.
Published in Frontiers in plant science (27.05.2022)
Published in Frontiers in plant science (27.05.2022)
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Journal Article
When birds of a feather flock together: Severe genomic erosion and the implications for genetic rescue in an endangered island passerine
Cavill, Emily L., Morales, Hernán E., Sun, Xin, Westbury, Michael V., Oosterhout, Cock, Accouche, Wilna, Zora, Anna, Schulze, Melissa J., Shah, Nirmal, Adam, Pierre‐André, Brooke, M. de L., Sweet, Paul, Gopalakrishnan, Shyam, Gilbert, M. Thomas P.
Published in Evolutionary applications (01.07.2024)
Published in Evolutionary applications (01.07.2024)
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Journal Article
Dynamics of pulsatile flow through model abdominal aortic aneurysms
Gopalakrishnan, Shyam Sunder, Pier, Benoît, Biesheuvel, Arie
Published in Journal of fluid mechanics (10.11.2014)
Published in Journal of fluid mechanics (10.11.2014)
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Journal Article
Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats
Gileta, Alexander F, Gao, Jianjun, Chitre, Apurva S, Bimschleger, Hannah V, St Pierre, Celine L, Gopalakrishnan, Shyam, Palmer, Abraham A
Published in G3 : genes - genomes - genetics (01.07.2020)
Published in G3 : genes - genomes - genetics (01.07.2020)
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Journal Article
Analysis of independent cohorts of outbred CFW mice reveals novel loci for behavioral and physiological traits and identifies factors determining reproducibility
Zou, Jennifer, Gopalakrishnan, Shyam, Parker, Clarissa C, Nicod, Jerome, Mott, Richard, Cai, Na, Lionikas, Arimantas, Davies, Robert W, Palmer, Abraham A, Flint, Jonathan
Published in G3 : genes - genomes - genetics (01.01.2022)
Published in G3 : genes - genomes - genetics (01.01.2022)
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Journal Article
Mitochondrial genomes of Danish vertebrate species generated for the national DNA reference database, DNAmark
Margaryan, Ashot, Noer, Christina Lehmkuhl, Richter, Stine Raith, Restrup, Marlene Elise, Bülow‐Hansen, Julie Lee, Leerhøi, Frederik, Langkjær, Emilia Marie Rolander, Gopalakrishnan, Shyam, Carøe, Christian, Gilbert, M. Thomas P., Bohmann, Kristine
Published in Environmental DNA (Hoboken, N.J.) (01.03.2021)
Published in Environmental DNA (Hoboken, N.J.) (01.03.2021)
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Journal Article
eDNA‐based biomonitoring at an experimental German vineyard to characterize how management regimes shape ecosystem diversity
Agerbo Rasmussen, Jacob, Nielsen, Martin, Mak, Sarah S. T., Döring, Johanna, Klincke, Franziska, Gopalakrishnan, Shyam, Dunn, Robert R., Kauer, Randolf, Gilbert, Marcus Thomas Pius
Published in Environmental DNA (Hoboken, N.J.) (01.01.2021)
Published in Environmental DNA (Hoboken, N.J.) (01.01.2021)
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Journal Article