Dynamic Gene Regulatory Networks Drive Hematopoietic Specification and Differentiation
Goode, Debbie K., Obier, Nadine, Vijayabaskar, M.S., Lie-A-Ling, Michael, Lilly, Andrew J., Hannah, Rebecca, Lichtinger, Monika, Batta, Kiran, Florkowska, Magdalena, Patel, Rahima, Challinor, Mairi, Wallace, Kirstie, Gilmour, Jane, Assi, Salam A., Cauchy, Pierre, Hoogenkamp, Maarten, Westhead, David R., Lacaud, Georges, Kouskoff, Valerie, Göttgens, Berthold, Bonifer, Constanze
Published in Developmental cell (07.03.2016)
Published in Developmental cell (07.03.2016)
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Journal Article
Integrated genome-scale analysis of the transcriptional regulatory landscape in a blood stem/progenitor cell model
Wilson, Nicola K., Schoenfelder, Stefan, Hannah, Rebecca, Sánchez Castillo, Manuel, Schütte, Judith, Ladopoulos, Vasileios, Mitchelmore, Joanna, Goode, Debbie K., Calero-Nieto, Fernando J., Moignard, Victoria, Wilkinson, Adam C., Jimenez-Madrid, Isabel, Kinston, Sarah, Spivakov, Mikhail, Fraser, Peter, Göttgens, Berthold
Published in Blood (31.03.2016)
Published in Blood (31.03.2016)
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Journal Article
Highly conserved non-coding sequences are associated with vertebrate development
Woolfe, Adam, Goodson, Martin, Goode, Debbie K, Snell, Phil, McEwen, Gayle K, Vavouri, Tanya, Smith, Sarah F, North, Phil, Callaway, Heather, Kelly, Krys, Walter, Klaudia, Abnizova, Irina, Gilks, Walter, Edwards, Yvonne J K, Cooke, Julie E, Elgar, Greg
Published in PLoS biology (01.01.2005)
Published in PLoS biology (01.01.2005)
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Journal Article
Identification of gene specific cis-regulatory elements during differentiation of mouse embryonic stem cells: An integrative approach using high-throughput datasets
Vijayabaskar, M S, Goode, Debbie K, Obier, Nadine, Lichtinger, Monika, Emmett, Amber M L, Abidin, Fatin N Zainul, Shar, Nisar, Hannah, Rebecca, Assi, Salam A, Lie-A-Ling, Michael, Gottgens, Berthold, Lacaud, Georges, Kouskoff, Valerie, Bonifer, Constanze, Westhead, David R
Published in PLoS computational biology (01.11.2019)
Published in PLoS computational biology (01.11.2019)
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Journal Article
Early evolution of conserved regulatory sequences associated with development in vertebrates
McEwen, Gayle K, Goode, Debbie K, Parker, Hugo J, Woolfe, Adam, Callaway, Heather, Elgar, Greg
Published in PLoS genetics (01.12.2009)
Published in PLoS genetics (01.12.2009)
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Journal Article
Minor change, major difference: divergent functions of highly conserved cis-regulatory elements subsequent to whole genome duplication events
Goode, Debbie K, Callaway, Heather A, Cerda, Gustavo A, Lewis, Katharine E, Elgar, Greg
Published in Development (Cambridge) (01.03.2011)
Published in Development (Cambridge) (01.03.2011)
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Journal Article
Parallel evolution of chordate cis-regulatory code for development
Doglio, Laura, Goode, Debbie K, Pelleri, Maria C, Pauls, Stefan, Frabetti, Flavia, Shimeld, Sebastian M, Vavouri, Tanya, Elgar, Greg
Published in PLoS genetics (01.11.2013)
Published in PLoS genetics (01.11.2013)
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Journal Article
Evolution of lineage-specific functions in ancient cis-regulatory modules
Pauls, Stefan, Goode, Debbie K., Petrone, Libero, Oliveri, Paola, Elgar, Greg
Published in Open biology (01.11.2015)
Published in Open biology (01.11.2015)
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Journal Article
Human GLI3 intragenic conserved non-coding sequences are tissue-specific enhancers
Abbasi, Amir Ali, Paparidis, Zissis, Malik, Sajid, Goode, Debbie K, Callaway, Heather, Elgar, Greg, Grzeschik, Karl-Heinz
Published in PloS one (11.04.2007)
Published in PloS one (11.04.2007)
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Journal Article
CONDOR: a database resource of developmentally associated conserved non-coding elements
Woolfe, Adam, Goode, Debbie K, Cooke, Julie, Callaway, Heather, Smith, Sarah, Snell, Phil, McEwen, Gayle K, Elgar, Greg
Published in BMC developmental biology (30.08.2007)
Published in BMC developmental biology (30.08.2007)
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Journal Article
Ultraconserved non-coding sequence element controls a subset of spatiotemporal GLI3 expression
Paparidis, Zissis, Abbasi, Amir Ali, Malik, Sajid, Goode, Debbie K, Callaway, Heather, Elgar, Greg, deGraaff, Esther, Lopez-Rios, Javier, Zeller, Rolf, Grzeschik, Karl-Heinz
Published in Development, growth & differentiation (01.08.2007)
Published in Development, growth & differentiation (01.08.2007)
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Journal Article
Single site-specific integration targeting coupled with embryonic stem cell differentiation provides a high-throughput alternative to in vivo enhancer analyses
Wilkinson, Adam C, Goode, Debbie K, Cheng, Yi-Han, Dickel, Diane E, Foster, Sam, Sendall, Tim, Tijssen, Marloes R, Sanchez, Maria-Jose, Pennacchio, Len A, Kirkpatrick, Aileen M, Göttgens, Berthold
Published in Biology open (15.11.2013)
Published in Biology open (15.11.2013)
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Journal Article
Highly conserved regulatory elements around the SHH gene may contribute to the maintenance of conserved synteny across human chromosome 7q36.3
Goode, Debbie K., Snell, Philip, Smith, Sarah F., Cooke, Julie E., Elgar, Greg
Published in Genomics (San Diego, Calif.) (01.08.2005)
Published in Genomics (San Diego, Calif.) (01.08.2005)
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Journal Article
Characterisation of conserved non-coding sequences in vertebrate genomes using bioinformatics, statistics and functional studies
Edwards, Yvonne J.K., Walter, Klaudia, McEwen, Gayle, Vavouri, Tanya, Kelly, Krystyna A., Abnizova, Irina, Woolfe, Adam, Goode, Debbie K., Goodson, Martin, North, Phil, Snell, Phil, Callaway, Heather, Smith, Sarah F., Gilks, Walter R., Cooke, Julie E., Elgar, Greg
Published in Comparative biochemistry and physiology. Part D, Genomics & proteomics (01.03.2006)
Published in Comparative biochemistry and physiology. Part D, Genomics & proteomics (01.03.2006)
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Journal Article
Correction: Parallel Evolution of Chordate Cis-Regulatory Code for Development
Doglio, Laura, Goode, Debbie K., Pelleri, Maria C., Pauls, Stefan, Frabetti, Flavia, Shimeld, Sebastian M., Vavouri, Tanya, Elgar, Greg
Published in PLoS genetics (28.11.2013)
Published in PLoS genetics (28.11.2013)
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Journal Article