Scalable metagenomic taxonomy classification using a reference genome database
Ames, Sasha K, Hysom, David A, Gardner, Shea N, Lloyd, G Scott, Gokhale, Maya B, Allen, Jonathan E
Published in Bioinformatics (15.09.2013)
Published in Bioinformatics (15.09.2013)
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Journal Article
Using populations of human and microbial genomes for organism detection in metagenomes
Ames, Sasha K, Gardner, Shea N, Marti, Jose Manuel, Slezak, Tom R, Gokhale, Maya B, Allen, Jonathan E
Published in Genome research (01.07.2015)
Published in Genome research (01.07.2015)
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Journal Article
Enabling Scalable and Extensible Memory-mapped Datastores in Userspace
Peng, Ivy B., Gokhale, Maya B., Youssef, Karim, Iwabuchi, Keita, Pearce, Roger
Published in IEEE transactions on parallel and distributed systems (03.06.2021)
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Published in IEEE transactions on parallel and distributed systems (03.06.2021)
Journal Article
A Container-Based Approach to OS Specialization for Exascale Computing
Zounmevo, Judicael A., Perarnau, Swann, Iskra, Kamil, Yoshii, Kazutomo, Gioiosa, Roberto, Van Essen, Brian C., Gokhale, Maya B., Leon, Edgar A.
Published in 2015 IEEE International Conference on Cloud Engineering (01.03.2015)
Published in 2015 IEEE International Conference on Cloud Engineering (01.03.2015)
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Conference Proceeding
Perspectives on AI Architectures and Codesign for Earth System Predictability
Mudunuru, Maruti K., Ang, James, Halappanavar, Mahantesh, Hammond, Simon D., Gokhale, Maya B., Hoe, James C., Krishna, Tushar, Sreepathi, Sarat, Norman, Matthew R., Peng, Ivy B., Jones, Philip W.
Published in Artificial intelligence for the earth systems (01.01.2024)
Published in Artificial intelligence for the earth systems (01.01.2024)
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Journal Article
Accelerating Molecular Dynamics Simulations with Reconfigurable Computers
Scrofano, R., Gokhale, M.B., Trouw, F., Prasanna, V.K.
Published in IEEE transactions on parallel and distributed systems (01.06.2008)
Published in IEEE transactions on parallel and distributed systems (01.06.2008)
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Journal Article
Trident: From high-level language to hardware circuitry: Reconfigurable
TRIPP, Justin L, GOKHALE, Maya B, PETERSON, Kristopher D
Published in Computer (Long Beach, Calif.) (2007)
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Published in Computer (Long Beach, Calif.) (2007)
Journal Article
A Case Study of Hardware/Software Partitioning of Traffic Simulation on the Cray XD1 : CONFIGURABLE DESIGN-I: HIGH-LEVEL RECONFIGURATION
TRIPP, Justin L, GOKHALE, Maya B, HANSSON, Anders A
Published in IEEE transactions on very large scale integration (VLSI) systems (2008)
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Published in IEEE transactions on very large scale integration (VLSI) systems (2008)
Journal Article
Message from the Workshop Chairs
Published in 2021 IEEE/ACM Workshop on Memory Centric High Performance Computing (MCHPC)
(01.11.2021)
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Conference Proceeding
Message from the Workshop Chairs
Published in 2019 IEEE/ACM Workshop on Memory Centric High Performance Computing (MCHPC)
(01.11.2019)
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Conference Proceeding
UMap: Enabling Application-driven Optimizations for Page Management
Peng, Ivy, McFadden, Marty, Green, Eric, Iwabuchi, Keita, Wu, Kai, Li, Dong, Pearce, Roger, Gokhale, Maya
Published in 2019 IEEE/ACM Workshop on Memory Centric High Performance Computing (MCHPC) (01.11.2019)
Published in 2019 IEEE/ACM Workshop on Memory Centric High Performance Computing (MCHPC) (01.11.2019)
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Conference Proceeding
Perspectives on AI Architectures and Co-design for Earth System Predictability
Mudunuru, Maruti K, Ang, James A, Halappanavar, Mahantesh, Hammond, Simon D, Gokhale, Maya B, Hoe, James C, Krishna, Tushar, Sreepathi, Sarat S, Norman, Matthew R, Peng, Ivy B, Jones, Philip W
Year of Publication 07.04.2023
Year of Publication 07.04.2023
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Journal Article
Argo NodeOS: Toward Unified Resource Management for Exascale
Perarnau, Swann, Zounmevo, Judicael A., Dreher, Matthieu, Van Essen, Brian C., Gioiosa, Roberto, Iskra, Kamil, Gokhale, Maya B., Yoshii, Kazutomo, Beckman, Pete
Published in 2017 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2017)
Published in 2017 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2017)
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Conference Proceeding
Design and Optimization of a Metagenomics Analysis Workflow for NVRAM
Ames, Sasha, Allen, Jonathan E., Hysom, David A., Lloyd, G. Scott, Gokhale, Maya B.
Published in 2014 IEEE International Parallel & Distributed Processing Symposium Workshops (01.05.2014)
Published in 2014 IEEE International Parallel & Distributed Processing Symposium Workshops (01.05.2014)
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Conference Proceeding
Matched Filter Computation on FPGA, Cell and GPU
Baker, Z.K., Gokhale, M.B., Tripp, J.L.
Published in 15th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM 2007) (01.04.2007)
Published in 15th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (FCCM 2007) (01.04.2007)
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Conference Proceeding