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Published in Gigascience (16.02.2021)
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Published in Gigascience (01.01.2018)
Published in Gigascience (01.01.2018)
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Rosen, Benjamin D, Bickhart, Derek M, Schnabel, Robert D, Koren, Sergey, Elsik, Christine G, Tseng, Elizabeth, Rowan, Troy N, Low, Wai Y, Zimin, Aleksey, Couldrey, Christine, Hall, Richard, Li, Wenli, Rhie, Arang, Ghurye, Jay, McKay, Stephanie D, Thibaud-Nissen, Françoise, Hoffman, Jinna, Murdoch, Brenda M, Snelling, Warren M, McDaneld, Tara G, Hammond, John A, Schwartz, John C, Nandolo, Wilson, Hagen, Darren E, Dreischer, Christian, Schultheiss, Sebastian J, Schroeder, Steven G, Phillippy, Adam M, Cole, John B, Van Tassell, Curtis P, Liu, George, Smith, Timothy P L, Medrano, Juan F
Published in Gigascience (01.03.2020)
Published in Gigascience (01.03.2020)
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rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data
Bushmanova, Elena, Antipov, Dmitry, Lapidus, Alla, Prjibelski, Andrey D
Published in Gigascience (01.09.2019)
Published in Gigascience (01.09.2019)
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Second-generation PLINK: rising to the challenge of larger and richer datasets
Chang, Christopher C, Chow, Carson C, Tellier, Laurent Cam, Vattikuti, Shashaank, Purcell, Shaun M, Lee, James J
Published in Gigascience (25.02.2015)
Published in Gigascience (25.02.2015)
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BLINK: a package for the next level of genome-wide association studies with both individuals and markers in the millions
Huang, Meng, Liu, Xiaolei, Zhou, Yao, Summers, Ryan M, Zhang, Zhiwu
Published in Gigascience (01.02.2019)
Published in Gigascience (01.02.2019)
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EEG dataset and OpenBMI toolbox for three BCI paradigms: an investigation into BCI illiteracy
Lee, Min-Ho, Kwon, O-Yeon, Kim, Yong-Jeong, Kim, Hong-Kyung, Lee, Young-Eun, Williamson, John, Fazli, Siamac, Lee, Seong-Whan
Published in Gigascience (01.05.2019)
Published in Gigascience (01.05.2019)
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Significantly improving the quality of genome assemblies through curation
Howe, Kerstin, Chow, William, Collins, Joanna, Pelan, Sarah, Pointon, Damon-Lee, Sims, Ying, Torrance, James, Tracey, Alan, Wood, Jonathan
Published in Gigascience (09.01.2021)
Published in Gigascience (09.01.2021)
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An improved pig reference genome sequence to enable pig genetics and genomics research
Warr, Amanda, Affara, Nabeel, Aken, Bronwen, Beiki, Hamid, Bickhart, Derek M, Billis, Konstantinos, Chow, William, Eory, Lel, Finlayson, Heather A, Flicek, Paul, Girón, Carlos G, Griffin, Darren K, Hall, Richard, Hannum, Greg, Hourlier, Thibaut, Howe, Kerstin, Hume, David A, Izuogu, Osagie, Kim, Kristi, Koren, Sergey, Liu, Haibou, Manchanda, Nancy, Martin, Fergal J, Nonneman, Dan J, O'Connor, Rebecca E, Phillippy, Adam M, Rohrer, Gary A, Rosen, Benjamin D, Rund, Laurie A, Sargent, Carole A, Schook, Lawrence B, Schroeder, Steven G, Schwartz, Ariel S, Skinner, Ben M, Talbot, Richard, Tseng, Elizabeth, Tuggle, Christopher K, Watson, Mick, Smith, Timothy P L, Archibald, Alan L
Published in Gigascience (01.06.2020)
Published in Gigascience (01.06.2020)
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TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads
Xu, Mengyang, Guo, Lidong, Gu, Shengqiang, Wang, Ou, Zhang, Rui, Peters, Brock A, Fan, Guangyi, Liu, Xin, Xu, Xun, Deng, Li, Zhang, Yongwei
Published in Gigascience (01.09.2020)
Published in Gigascience (01.09.2020)
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Construction of a chromosome-scale long-read reference genome assembly for potato
Pham, Gina M, Hamilton, John P, Wood, Joshua C, Burke, Joseph T, Zhao, Hainan, Vaillancourt, Brieanne, Ou, Shujun, Jiang, Jiming, Buell, C Robin
Published in Gigascience (23.09.2020)
Published in Gigascience (23.09.2020)
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IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
Kalantar, Katrina L, Carvalho, Tiago, de Bourcy, Charles F A, Dimitrov, Boris, Dingle, Greg, Egger, Rebecca, Han, Julie, Holmes, Olivia B, Juan, Yun-Fang, King, Ryan, Kislyuk, Andrey, Lin, Michael F, Mariano, Maria, Morse, Todd, Reynoso, Lucia V, Cruz, David Rissato, Sheu, Jonathan, Tang, Jennifer, Wang, James, Zhang, Mark A, Zhong, Emily, Ahyong, Vida, Lay, Sreyngim, Chea, Sophana, Bohl, Jennifer A, Manning, Jessica E, Tato, Cristina M, DeRisi, Joseph L
Published in GigaScience (15.10.2020)
Published in GigaScience (15.10.2020)
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HTSlib: C library for reading/writing high-throughput sequencing data
Bonfield, James K, Marshall, John, Danecek, Petr, Li, Heng, Ohan, Valeriu, Whitwham, Andrew, Keane, Thomas, Davies, Robert M
Published in Gigascience (16.02.2021)
Published in Gigascience (16.02.2021)
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SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
Luo, Ruibang, Liu, Binghang, Xie, Yinlong, Li, Zhenyu, Huang, Weihua, Yuan, Jianying, He, Guangzhu, Chen, Yanxiang, Pan, Qi, Liu, Yunjie, Tang, Jingbo, Wu, Gengxiong, Zhang, Hao, Shi, Yujian, Liu, Yong, Yu, Chang, Wang, Bo, Lu, Yao, Han, Changlei, Cheung, David W, Yiu, Siu-Ming, Peng, Shaoliang, Xiaoqian, Zhu, Liu, Guangming, Liao, Xiangke, Li, Yingrui, Yang, Huanming, Wang, Jian, Lam, Tak-Wah, Wang, Jun
Published in Gigascience (27.12.2012)
Published in Gigascience (27.12.2012)
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zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs
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Published in Gigascience (01.06.2018)
Published in Gigascience (01.06.2018)
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Deep machine learning provides state-of-the-art performance in image-based plant phenotyping
Pound, Michael P., Atkinson, Jonathan A., Townsend, Alexandra J., Wilson, Michael H., Griffiths, Marcus, Jackson, Aaron S., Bulat, Adrian, Tzimiropoulos, Georgios, Wells, Darren M., Murchie, Erik H., Pridmore, Tony P., French, Andrew P.
Published in Gigascience (01.10.2017)
Published in Gigascience (01.10.2017)
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