Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data
Ficetola, Gentile F., Pansu, Johan, Bonin, Aurélie, Coissac, Eric, Giguet-Covex, Charline, De Barba, Marta, Gielly, Ludovic, Lopes, Carla M., Boyer, Frédéric, Pompanon, François, Rayé, Gilles, Taberlet, Pierre
Published in Molecular ecology resources (01.05.2015)
Published in Molecular ecology resources (01.05.2015)
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Journal Article
Long livestock farming history and human landscape shaping revealed by lake sediment DNA
Giguet-Covex, Charline, Pansu, Johan, Arnaud, Fabien, Rey, Pierre-Jérôme, Griggo, Christophe, Gielly, Ludovic, Domaizon, Isabelle, Coissac, Eric, David, Fernand, Choler, Philippe, Poulenard, Jérôme, Taberlet, Pierre
Published in Nature communications (03.02.2014)
Published in Nature communications (03.02.2014)
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Journal Article
6-kyr record of flood frequency and intensity in the western Mediterranean Alps – Interplay of solar and temperature forcing
Sabatier, Pierre, Wilhelm, Bruno, Ficetola, Gentile Francesco, Moiroux, Fanny, Poulenard, Jérôme, Develle, Anne-Lise, Bichet, Adeline, Chen, Wentao, Pignol, Cécile, Reyss, Jean-Louis, Gielly, Ludovic, Bajard, Manon, Perrette, Yves, Malet, Emmanuel, Taberlet, Pierre, Arnaud, Fabien
Published in Quaternary science reviews (15.08.2017)
Published in Quaternary science reviews (15.08.2017)
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Journal Article
Cascading effects of moth outbreaks on subarctic soil food webs
Calderón-Sanou, Irene, Münkemüller, Tamara, Zinger, Lucie, Schimann, Heidy, Yoccoz, Nigel Gilles, Gielly, Ludovic, Foulquier, Arnaud, Hedde, Mickael, Ohlmann, Marc, Roy, Mélanie, Si-Moussi, Sara, Thuiller, Wilfried
Published in Scientific reports (23.07.2021)
Published in Scientific reports (23.07.2021)
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Journal Article
Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA
Pansu, Johan, Giguet-Covex, Charline, Ficetola, Gentile Francesco, Gielly, Ludovic, Boyer, Frédéric, Zinger, Lucie, Arnaud, Fabien, Poulenard, Jérôme, Taberlet, Pierre, Choler, Philippe
Published in Molecular ecology (01.04.2015)
Published in Molecular ecology (01.04.2015)
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Journal Article
Mapping the imprint of biotic interactions on β‐diversity
Ohlmann, Marc, Mazel, Florent, Chalmandrier, Loïc, Bec, Stéphane, Coissac, Eric, Gielly, Ludovic, Pansu, Johan, Schilling, Vincent, Taberlet, Pierre, Zinger, Lucie, Chave, Jérome, Thuiller, Wilfried, Chase, Jonathan
Published in Ecology letters (01.11.2018)
Published in Ecology letters (01.11.2018)
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Journal Article
Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies
TABERLET, PIERRE, PRUD'HOMME, SOPHIE M., CAMPIONE, ETIENNE, ROY, JULIEN, MIQUEL, CHRISTIAN, SHEHZAD, WASIM, GIELLY, LUDOVIC, RIOUX, DELPHINE, CHOLER, PHILIPPE, CLÉMENT, JEAN-CHRISTOPHE, MELODELIMA, CHRISTELLE, POMPANON, FRANÇOIS, COISSAC, ERIC
Published in Molecular ecology (01.04.2012)
Published in Molecular ecology (01.04.2012)
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Journal Article
Persistence of environmental DNA in cultivated soils: implication of this memory effect for reconstructing the dynamics of land use and cover changes
Foucher, Anthony, Evrard, Olivier, Ficetola, G Francesco, Gielly, Ludovic, Poulain, Julie, Giguet-Covex, Charline, Laceby, J Patrick, Salvador-Blanes, Sébastien, Cerdan, Olivier, Poulenard, Jérôme
Published in Scientific reports (29.06.2020)
Published in Scientific reports (29.06.2020)
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Journal Article
Lake sedimentary DNA accurately records 20th Century introductions of exotic conifers in Scotland
Sjögren, Per, Edwards, Mary E., Gielly, Ludovic, Langdon, Catherine T., Croudace, Ian W., Merkel, Marie Kristine Føreid, Fonville, Thierry, Alsos, Inger Greve
Published in The New phytologist (01.01.2017)
Published in The New phytologist (01.01.2017)
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Journal Article
Metabarcoding of modern soil DNA gives a highly local vegetation signal in Svalbard tundra
Edwards, Mary E, Alsos, Inger Greve, Yoccoz, Nigel, Coissac, Eric, Goslar, Tomasz, Gielly, Ludovic, Haile, James, Langdon, Catherine T, Tribsch, Andreas, Binney, Heather A, von Stedingk, Henrik, Taberlet, Pierre
Published in Holocene (Sevenoaks) (01.12.2018)
Published in Holocene (Sevenoaks) (01.12.2018)
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Journal Article
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
VALENTINI, ALICE, MIQUEL, CHRISTIAN, NAWAZ, MUHAMMAD ALI, BELLEMAIN, EVA, COISSAC, ERIC, POMPANON, FRANÇOIS, GIELLY, LUDOVIC, CRUAUD, CORINNE, NASCETTI, GIUSEPPE, WINCKER, PATRICK, SWENSON, JON E., TABERLET, PIERRE
Published in Molecular ecology resources (01.01.2009)
Published in Molecular ecology resources (01.01.2009)
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Journal Article
Multi‐taxa colonisation along the foreland of a vanishing equatorial glacier
Rosero, Pedro, Crespo‐Pérez, Verónica, Espinosa, Rodrigo, Andino, Patricio, Barragán, Álvaro, Moret, Pierre, Gobbi, Mauro, Ficetola, Gentile Francesco, Jaramillo, Ricardo, Muriel, Priscilla, Anthelme, Fabien, Jacobsen, Dean, Dangles, Olivier, Condom, Thomas, Gielly, Ludovic, Poulenard, Jérôme, Rabatel, Antoine, Basantes, Rubén, Cáceres Correa, Bolívar, Cauvy‐Fraunié, Sophie
Published in Ecography (Copenhagen) (01.07.2021)
Published in Ecography (Copenhagen) (01.07.2021)
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Journal Article
Sedimentary ancient DNA from Lake Skartjørna, Svalbard: Assessing the resilience of arctic flora to Holocene climate change
Alsos, Inger Greve, Sjögren, Per, Edwards, Mary E, Landvik, Jon Y, Gielly, Ludovic, Forwick, Matthias, Coissac, Eric, Brown, Antony G, Jakobsen, Leif V, Føreid, Marie K, Pedersen, Mikkel W
Published in Holocene (Sevenoaks) (01.04.2016)
Published in Holocene (Sevenoaks) (01.04.2016)
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Journal Article
Environmental and biotic drivers of soil microbial β‐diversity across spatial and phylogenetic scales
Chalmandrier, Loïc, Pansu, Johan, Zinger, Lucie, Boyer, Frederic, Coissac, Eric, Génin, Alexandre, Gielly, Ludovic, Lavergne, Sébastien, Legay, Nicolas, Schilling, Vincent, Taberlet, Pierre, Münkemüller, Tamara, Thuiller, Wilfried
Published in Ecography (Copenhagen) (01.12.2019)
Published in Ecography (Copenhagen) (01.12.2019)
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Journal Article
Ecological specialization and niche overlap of subterranean rodents inferred from DNA metabarcoding diet analysis
Lopes, Carla Martins, De Barba, Marta, Boyer, Frédéric, Mercier, Céline, Galiano, Daniel, Kubiak, Bruno Busnello, Maestri, Renan, Silva Filho, Pedro Joel Silva, Gielly, Ludovic, Coissac, Eric, Freitas, Thales Renato Ochotorena, Taberlet, Pierre
Published in Molecular ecology (01.08.2020)
Published in Molecular ecology (01.08.2020)
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Journal Article
Altitudinal Zonation of Green Algae Biodiversity in the French Alps
Stewart, Adeline, Rioux, Delphine, Boyer, Fréderic, Gielly, Ludovic, Pompanon, François, Saillard, Amélie, Thuiller, Wilfried, Valay, Jean-Gabriel, Maréchal, Eric, Coissac, Eric
Published in Frontiers in plant science (07.06.2021)
Published in Frontiers in plant science (07.06.2021)
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Journal Article
DNA from lake sediments reveals long-term ecosystem changes after a biological invasion
Ficetola, Gentile Francesco, Poulenard, Jérôme, Sabatier, Pierre, Messager, Erwan, Gielly, Ludovic, Leloup, Anouk, Etienne, David, Bakke, Jostein, Malet, Emmanuel, Fanget, Bernard, Støren, Eivind, Reyss, Jean-Louis, Taberlet, Pierre, Arnaud, Fabien
Published in Science advances (09.05.2018)
Published in Science advances (09.05.2018)
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Journal Article
History or ecology? Substrate type as a major driver of patial genetic structure in Alpine plants
Alvarez, Nadir, Thiel-Egenter, Conny, Tribsch, Andreas, Holderegger, Rolf, Manel, Stéphanie, Schönswetter, Peter, Taberlet, Pierre, Brodbeck, Sabine, Gaudeul, Myriam, Gielly, Ludovic, Küpfer, Philippe, Mansion, Guilhem, Negrini, Riccardo, Paun, Ovidiu, Pellecchia, Marco, Rioux, Delphine, Schüpfer, Fanny, Van Loo, Marcela, Winkler, Manuela, Gugerli, Felix
Published in Ecology letters (01.07.2009)
Published in Ecology letters (01.07.2009)
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Journal Article