A reproducible evaluation of ANTs similarity metric performance in brain image registration
Avants, Brian B., Tustison, Nicholas J., Song, Gang, Cook, Philip A., Klein, Arno, Gee, James C.
Published in NeuroImage (Orlando, Fla.) (01.02.2011)
Published in NeuroImage (Orlando, Fla.) (01.02.2011)
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Journal Article
Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements
Tustison, Nicholas J., Cook, Philip A., Klein, Arno, Song, Gang, Das, Sandhitsu R., Duda, Jeffrey T., Kandel, Benjamin M., van Strien, Niels, Stone, James R., Gee, James C., Avants, Brian B.
Published in NeuroImage (Orlando, Fla.) (01.10.2014)
Published in NeuroImage (Orlando, Fla.) (01.10.2014)
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Journal Article
N4ITK: Improved N3 Bias Correction
Tustison, Nicholas J, Avants, Brian B, Cook, Philip A, Yuanjie Zheng, Egan, Alexander, Yushkevich, Paul A, Gee, James C
Published in IEEE transactions on medical imaging (01.06.2010)
Published in IEEE transactions on medical imaging (01.06.2010)
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Journal Article
Childhood socioeconomic status and childhood maltreatment: Distinct associations with brain structure
Lawson, Gwendolyn M, Camins, Joshua S, Wisse, Laura, Wu, Jue, Duda, Jeffrey T, Cook, Philip A, Gee, James C, Farah, Martha J
Published in PloS one (17.04.2017)
Published in PloS one (17.04.2017)
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Journal Article
The ANTsX ecosystem for quantitative biological and medical imaging
Tustison, Nicholas J., Cook, Philip A., Holbrook, Andrew J., Johnson, Hans J., Muschelli, John, Devenyi, Gabriel A., Duda, Jeffrey T., Das, Sandhitsu R., Cullen, Nicholas C., Gillen, Daniel L., Yassa, Michael A., Stone, James R., Gee, James C., Avants, Brian B.
Published in Scientific reports (27.04.2021)
Published in Scientific reports (27.04.2021)
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Journal Article
The Insight ToolKit image registration framework
Avants, Brian B, Tustison, Nicholas J, Stauffer, Michael, Song, Gang, Wu, Baohua, Gee, James C
Published in Frontiers in neuroinformatics (28.04.2014)
Published in Frontiers in neuroinformatics (28.04.2014)
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Journal Article
The optimal template effect in hippocampus studies of diseased populations
Avants, Brian B., Yushkevich, Paul, Pluta, John, Minkoff, David, Korczykowski, Marc, Detre, John, Gee, James C.
Published in NeuroImage (Orlando, Fla.) (01.02.2010)
Published in NeuroImage (Orlando, Fla.) (01.02.2010)
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Journal Article
Artificial Intelligence System Approaching Neuroradiologist-level Differential Diagnosis Accuracy at Brain MRI
Rauschecker, Andreas M, Rudie, Jeffrey D, Xie, Long, Wang, Jiancong, Duong, Michael Tran, Botzolakis, Emmanuel J, Kovalovich, Asha M, Egan, John, Cook, Tessa C, Bryan, R Nick, Nasrallah, Ilya M, Mohan, Suyash, Gee, James C
Published in Radiology (01.06.2020)
Published in Radiology (01.06.2020)
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Journal Article
User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability
Yushkevich, Paul A., Piven, Joseph, Hazlett, Heather Cody, Smith, Rachel Gimpel, Ho, Sean, Gee, James C., Gerig, Guido
Published in NeuroImage (Orlando, Fla.) (01.07.2006)
Published in NeuroImage (Orlando, Fla.) (01.07.2006)
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Journal Article
Parenchymal texture analysis in digital mammography: A fully automated pipeline for breast cancer risk assessment
Zheng, Yuanjie, Keller, Brad M, Ray, Shonket, Wang, Yan, Conant, Emily F, Gee, James C, Kontos, Despina
Published in Medical physics (Lancaster) (01.07.2015)
Published in Medical physics (Lancaster) (01.07.2015)
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Journal Article
Learning image-based spatial transformations via convolutional neural networks: A review
Tustison, Nicholas J., Avants, Brian B., Gee, James C.
Published in Magnetic resonance imaging (01.12.2019)
Published in Magnetic resonance imaging (01.12.2019)
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Journal Article
Linear associations between clinically assessed upper motor neuron disease and diffusion tensor imaging metrics in amyotrophic lateral sclerosis
Woo, John H, Wang, Sumei, Melhem, Elias R, Gee, James C, Cucchiara, Andrew, McCluskey, Leo, Elman, Lauren
Published in PloS one (21.08.2014)
Published in PloS one (21.08.2014)
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Journal Article
Registration based cortical thickness measurement
Das, Sandhitsu R., Avants, Brian B., Grossman, Murray, Gee, James C.
Published in NeuroImage (Orlando, Fla.) (15.04.2009)
Published in NeuroImage (Orlando, Fla.) (15.04.2009)
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Journal Article
Cellular anatomy of the mouse primary motor cortex
Muñoz-Castañeda, Rodrigo, Zingg, Brian, Matho, Katherine S., Chen, Xiaoyin, Wang, Quanxin, Foster, Nicholas N., Li, Anan, Narasimhan, Arun, Hirokawa, Karla E., Huo, Bingxing, Bannerjee, Samik, Korobkova, Laura, Park, Chris Sin, Park, Young-Gyun, Bienkowski, Michael S., Chon, Uree, Wheeler, Diek W., Li, Xiangning, Wang, Yun, Naeemi, Maitham, Xie, Peng, Liu, Lijuan, Kelly, Kathleen, An, Xu, Attili, Sarojini M., Bowman, Ian, Bludova, Anastasiia, Cetin, Ali, Ding, Liya, Drewes, Rhonda, D’Orazi, Florence, Elowsky, Corey, Fischer, Stephan, Galbavy, William, Gao, Lei, Gillis, Jesse, Groblewski, Peter A., Gou, Lin, Hahn, Joel D., Hatfield, Joshua T., Hintiryan, Houri, Huang, Junxiang Jason, Kondo, Hideki, Kuang, Xiuli, Lesnar, Philip, Li, Xu, Li, Yaoyao, Lin, Mengkuan, Lo, Darrick, Mizrachi, Judith, Mok, Stephanie, Nicovich, Philip R., Palaniswamy, Ramesh, Palmer, Jason, Qi, Xiaoli, Shen, Elise, Sun, Yu-Chi, Tao, Huizhong W., Wakemen, Wayne, Wang, Yimin, Yao, Shenqin, Yuan, Jing, Zhan, Huiqing, Zhu, Muye, Ng, Lydia, Zhang, Li I., Lim, Byung Kook, Hawrylycz, Michael, Gong, Hui, Gee, James C., Kim, Yongsoo, Chung, Kwanghun, Yang, X. William, Peng, Hanchuan, Luo, Qingming, Mitra, Partha P., Zador, Anthony M., Zeng, Hongkui, Ascoli, Giorgio A., Josh Huang, Z., Osten, Pavel, Harris, Julie A., Dong, Hong-Wei
Published in Nature (London) (07.10.2021)
Published in Nature (London) (07.10.2021)
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Journal Article
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration
Klein, Arno, Andersson, Jesper, Ardekani, Babak A., Ashburner, John, Avants, Brian, Chiang, Ming-Chang, Christensen, Gary E., Collins, D. Louis, Gee, James, Hellier, Pierre, Song, Joo Hyun, Jenkinson, Mark, Lepage, Claude, Rueckert, Daniel, Thompson, Paul, Vercauteren, Tom, Woods, Roger P., Mann, J. John, Parsey, Ramin V.
Published in NeuroImage (Orlando, Fla.) (01.07.2009)
Published in NeuroImage (Orlando, Fla.) (01.07.2009)
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Journal Article
Estimation of breast percent density in raw and processed full field digital mammography images via adaptive fuzzy c-means clustering and support vector machine segmentation
Keller, Brad M, Nathan, Diane L, Wang, Yan, Zheng, Yuanjie, Gee, James C, Conant, Emily F, Kontos, Despina
Published in Medical physics (Lancaster) (01.08.2012)
Published in Medical physics (Lancaster) (01.08.2012)
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