Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline
Pauvert, Charlie, Buée, Marc, Laval, Valérie, Edel-Hermann, Véronique, Fauchery, Laure, Gautier, Angélique, Lesur, Isabelle, Vallance, Jessica, Vacher, Corinne
Published in Fungal ecology (01.10.2019)
Published in Fungal ecology (01.10.2019)
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Origin, migration routes and worldwide population genetic structure of the wheat yellow rust pathogen Puccinia striiformis f.sp. tritici
Ali, Sajid, Gladieux, Pierre, Leconte, Marc, Gautier, Angélique, Justesen, Annemarie F, Hovmøller, Mogens S, Enjalbert, Jérôme, de Vallavieille-Pope, Claude
Published in PLoS pathogens (01.01.2014)
Published in PLoS pathogens (01.01.2014)
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Major changes in grapevine wood microbiota are associated with the onset of esca, a devastating trunk disease
Bruez, Emilie, Vallance, Jessica, Gautier, Angélique, Laval, Valérie, Compant, Stéphane, Maurer, Wolfgang, Sessitsch, Angela, Lebrun, Marc‐Henri, Rey, Patrice
Published in Environmental microbiology (01.12.2020)
Published in Environmental microbiology (01.12.2020)
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Journal Article
Metabarcoding targeting the EF1 alpha region to assess Fusarium diversity on cereals
Boutigny, Anne-Laure, Gautier, Angélique, Basler, Ryan, Dauthieux, Florian, Leite, Stephen, Valade, Romain, Aguayo, Jaime, Ioos, Renaud, Laval, Valérie
Published in PloS one (11.01.2019)
Published in PloS one (11.01.2019)
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Polymorphism of avirulence genes and adaptation to Brassica resistance genes is gene-dependent in the phytopathogenic fungus Leptosphaeria maculans
Gautier, Angélique, Laval, Valérie, Faure, Sébastien, Rouxel, Thierry, Balesdent, Marie-Helene
Published in Phytopathology (01.07.2023)
Published in Phytopathology (01.07.2023)
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Twenty Years of Leptosphaeria maculans Population Survey in France Suggests Pyramiding Rlm3 and Rlm7 in Rapeseed Is a Risky Resistance Management Strategy
Balesdent, Marie-Hélène, Gautier, Angélique, Plissonneau, Clémence, Le Meur, Loïc, Loiseau, Alizée, Leflon, Martine, Carpezat, Julien, Pinochet, Xavier, Rouxel, Thierry
Published in Phytopathology (01.10.2022)
Published in Phytopathology (01.10.2022)
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Inferring the contribution of sexual reproduction, migration and off‐season survival to the temporal maintenance of microbial populations: a case study on the wheat fungal pathogen Puccinia striiformis f.sp. tritici
Ali, Sajid, Gladieux, Pierre, Rahman, Hidayatur, Saqib, Muhammad S, Fiaz, Muhammad, Ahmad, Habib, Leconte, Marc, Gautier, Angélique, Justesen, Annemarie F, Hovmøller, Mogens S, Enjalbert, Jérôme, Vallavieille‐Pope, Claude
Published in Molecular ecology (01.02.2014)
Published in Molecular ecology (01.02.2014)
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A functional bikaverin biosynthesis gene cluster in rare strains of Botrytis cinerea is positively controlled by VELVET
Schumacher, Julia, Gautier, Angélique, Morgant, Guillaume, Studt, Lena, Ducrot, Paul-Henri, Le Pêcheur, Pascal, Azeddine, Saad, Fillinger, Sabine, Leroux, Pierre, Tudzynski, Bettina, Viaud, Muriel
Published in PloS one (07.01.2013)
Published in PloS one (07.01.2013)
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Botrytis pseudocinerea, a New Cryptic Species Causing Gray Mold in French Vineyards in Sympatry with Botrytis cinerea
WALKER, Anne-Sophie, GAUTIER, Angélique, CONFAIS, Johann, MARTINHO, Daniel, VIAUD, Muriel, PECHEUR, Pascal Le, DUPONT, Joelle, FOURNIER, Elisabeth
Published in Phytopathology (01.12.2011)
Published in Phytopathology (01.12.2011)
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A Specific Resistance Gene to Leptosphaeria maculans , Rlm11 , Has a Limited Impact on Brassica napus Mycobiota Compared with Plant Compartment or Cropping Season Effects
Gorse, Mathilde, Kerdraon, Lydie, Jacques, Noémie, Gautier, Angélique, Balesdent, Marie-Hélène, Laval, Valérie
Published in Phytobiomes journal (01.07.2024)
Published in Phytobiomes journal (01.07.2024)
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Journal Article
cloncase: Estimation of sex frequency and effective population size by clonemate resampling in partially clonal organisms
Ali, Sajid, Soubeyrand, Samuel, Gladieux, Pierre, Giraud, Tatiana, Leconte, Marc, Gautier, Angélique, Mboup, Mamadou, Chen, Wanquan, de Vallavieille-Pope, Claude, Enjalbert, Jérôme
Published in Molecular ecology resources (01.07.2016)
Published in Molecular ecology resources (01.07.2016)
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A Linkage Map for Brown Trout (Salmo trutta): Chromosome Homeologies and Comparative Genome Organization With Other Salmonid Fish
Gharbi, Karim, Gautier, Angelique, Danzmann, Roy G, Gharbi, Sonia, Sakamoto, Takashi, Hoyheim, Bjorn, Taggart, John B, Cairney, Margaret, Powell, Richard, Krieg, Francine, Okamoto, Nobuaki, Ferguson, Moira M, Holm, Lars-Erik, Guyomard, Rene
Published in Genetics (Austin) (01.04.2006)
Published in Genetics (Austin) (01.04.2006)
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A rapid genotyping method for an obligate fungal pathogen, Puccinia striiformis f.sp. tritici, based on DNA extraction from infected leaf and Multiplex PCR genotyping
Ali, Sajid, Gautier, Angélique, Leconte, Marc, Enjalbert, Jérôme, de Vallavieille-Pope, Claude
Published in BMC research notes (20.07.2011)
Published in BMC research notes (20.07.2011)
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Journal Article
Development of a rapid multiplex SSR genotyping method to study populations of the fungal plant pathogen Zymoseptoria tritici
Gautier, Angélique, Marcel, Thierry C, Confais, Johann, Crane, Charles, Kema, Gert, Suffert, Frédéric, Walker, Anne-Sophie
Published in BMC research notes (18.06.2014)
Published in BMC research notes (18.06.2014)
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Journal Article
Origin, Migration Routes and Worldwide Population Genetic Structure of the Wheat Yellow Rust Pathogen Puccinia striiformis f.sp. tritici: e1003903
Ali, Sajid, Gladieux, Pierre, Leconte, Marc, Gautier, Angélique, Justesen, Annemarie F, Hovmøller, Mogens S, Enjalbert, Jérôme, Vallavieille-Pope, Claude de
Published in PLoS pathogens (01.01.2014)
Published in PLoS pathogens (01.01.2014)
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Journal Article
Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea
Amselem, Joelle, Cuomo, Christina A, van Kan, Jan A L, Viaud, Muriel, Benito, Ernesto P, Couloux, Arnaud, Coutinho, Pedro M, de Vries, Ronald P, Dyer, Paul S, Fillinger, Sabine, Fournier, Elisabeth, Gout, Lilian, Hahn, Matthias, Kohn, Linda, Lapalu, Nicolas, Plummer, Kim M, Pradier, Jean-Marc, Quévillon, Emmanuel, Sharon, Amir, Simon, Adeline, ten Have, Arjen, Tudzynski, Bettina, Tudzynski, Paul, Wincker, Patrick, Andrew, Marion, Anthouard, Véronique, Beever, Ross E, Beffa, Rolland, Benoit, Isabelle, Bouzid, Ourdia, Brault, Baptiste, Chen, Zehua, Choquer, Mathias, Collémare, Jérome, Cotton, Pascale, Danchin, Etienne G, Da Silva, Corinne, Gautier, Angélique, Giraud, Corinne, Giraud, Tatiana, Gonzalez, Celedonio, Grossetete, Sandrine, Güldener, Ulrich, Henrissat, Bernard, Howlett, Barbara J, Kodira, Chinnappa, Kretschmer, Matthias, Lappartient, Anne, Leroch, Michaela, Levis, Caroline, Mauceli, Evan, Neuvéglise, Cécile, Oeser, Birgitt, Pearson, Matthew, Poulain, Julie, Poussereau, Nathalie, Quesneville, Hadi, Rascle, Christine, Schumacher, Julia, Ségurens, Béatrice, Sexton, Adrienne, Silva, Evelyn, Sirven, Catherine, Soanes, Darren M, Talbot, Nicholas J, Templeton, Matt, Yandava, Chandri, Yarden, Oded, Zeng, Qiandong, Rollins, Jeffrey A, Lebrun, Marc-Henri, Dickman, Marty
Published in PLoS genetics (01.08.2011)
Published in PLoS genetics (01.08.2011)
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Evidence of genetic recombination in wheat yellow rust populations of a Chinese oversummering area
Mboup, M., Leconte, M., Gautier, A., Wan, A.M., Chen, W., de Vallavieille-Pope, C., Enjalbert, J.
Published in Fungal genetics and biology (01.04.2009)
Published in Fungal genetics and biology (01.04.2009)
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