Single-Cell Genomics Unveils Critical Regulators of Th17 Cell Pathogenicity
Gaublomme, Jellert T., Yosef, Nir, Lee, Youjin, Gertner, Rona S., Yang, Li V., Wu, Chuan, Pandolfi, Pier Paolo, Mak, Tak, Satija, Rahul, Shalek, Alex K., Kuchroo, Vijay K., Park, Hongkun, Regev, Aviv
Published in Cell (03.12.2015)
Published in Cell (03.12.2015)
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Journal Article
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
Shalek, Alex K., Satija, Rahul, Adiconis, Xian, Gertner, Rona S., Gaublomme, Jellert T., Raychowdhury, Raktima, Schwartz, Schraga, Yosef, Nir, Malboeuf, Christine, Lu, Diana, Trombetta, John J., Gennert, Dave, Gnirke, Andreas, Goren, Alon, Hacohen, Nir, Levin, Joshua Z., Park, Hongkun, Regev, Aviv
Published in Nature (London) (13.06.2013)
Published in Nature (London) (13.06.2013)
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Journal Article
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
Gaublomme, Jellert T., Li, Bo, McCabe, Cristin, Knecht, Abigail, Yang, Yiming, Drokhlyansky, Eugene, Van Wittenberghe, Nicholas, Waldman, Julia, Dionne, Danielle, Nguyen, Lan, De Jager, Philip L., Yeung, Bertrand, Zhao, Xinfang, Habib, Naomi, Rozenblatt-Rosen, Orit, Regev, Aviv
Published in Nature communications (02.07.2019)
Published in Nature communications (02.07.2019)
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Nanowire-Mediated Delivery Enables Functional Interrogation of Primary Immune Cells: Application to the Analysis of Chronic Lymphocytic Leukemia
Shalek, Alex K, Gaublomme, Jellert T, Wang, Lili, Yosef, Nir, Chevrier, Nicolas, Andersen, Mette S, Robinson, Jacob T, Pochet, Nathalie, Neuberg, Donna, Gertner, Rona S, Amit, Ido, Brown, Jennifer R, Hacohen, Nir, Regev, Aviv, Wu, Catherine J, Park, Hongkun
Published in Nano letters (12.12.2012)
Published in Nano letters (12.12.2012)
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Journal Article
Probing Enzymatic Activity inside Living Cells Using a Nanowire–Cell “Sandwich” Assay
Na, Yu-Ran, Kim, So Yeon, Gaublomme, Jellert T, Shalek, Alex K, Jorgolli, Marsela, Park, Hongkun, Yang, Eun Gyeong
Published in Nano letters (09.01.2013)
Published in Nano letters (09.01.2013)
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Journal Article
Author Correction: Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
Gaublomme, Jellert T., Li, Bo, McCabe, Cristin, Knecht, Abigail, Yang, Yiming, Drokhlyansky, Eugene, Van Wittenberghe, Nicholas, Waldman, Julia, Dionne, Danielle, Nguyen, Lan, De Jager, Philip L., Yeung, Bertrand, Zhao, Xinfang, Habib, Naomi, Rozenblatt-Rosen, Orit, Regev, Aviv
Published in Nature communications (02.11.2020)
Published in Nature communications (02.11.2020)
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Journal Article
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
Shalek, Alex K., Satija, Rahul, Shuga, Joe, Trombetta, John J., Gennert, Dave, Lu, Diana, Chen, Peilin, Gertner, Rona S., Gaublomme, Jellert T., Yosef, Nir, Schwartz, Schraga, Fowler, Brian, Weaver, Suzanne, Wang, Jing, Wang, Xiaohui, Ding, Ruihua, Raychowdhury, Raktima, Friedman, Nir, Hacohen, Nir, Park, Hongkun, May, Andrew P., Regev, Aviv
Published in Nature (London) (19.06.2014)
Published in Nature (London) (19.06.2014)
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Journal Article
Mapping multimodal phenotypes to perturbations in cells and tissue with CRISPRmap
Gu, Jiacheng, Iyer, Abhishek, Wesley, Ben, Taglialatela, Angelo, Leuzzi, Giuseppe, Hangai, Sho, Decker, Aubrianna, Gu, Ruoyu, Klickstein, Naomi, Shuai, Yuanlong, Jankovic, Kristina, Parker-Burns, Lucy, Jin, Yinuo, Zhang, Jia Yi, Hong, Justin, Niu, Xiang, Costa, Jonathon A, Pezet, Mikael G, Chou, Jacqueline, Snoeck, Hans-Willem, Landau, Dan A, Azizi, Elham, Chan, Edmond M, Ciccia, Alberto, Gaublomme, Jellert T
Published in Nature biotechnology (07.10.2024)
Published in Nature biotechnology (07.10.2024)
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Journal Article
A Roadmap for the Human Gut Cell Atlas
Zilbauer, Matthias, James, Kylie R., Kaur, Mandeep, Pott, Sebastian, Li, Zhixin, Burger, Albert, Thiagarajah, Jay R., Burclaff, Joseph, Jahnsen, Frode L., Perrone, Francesca, Ross, Alexander D., Matteoli, Gianluca, Stakenborg, Nathalie, Sujino, Tomohisa, Moor, Andreas, Bartolome-Casado, Raquel, Bækkevold, Espen S., Zhou, Ran, Xie, Bingqing, Lau, Ken S., Din, Shahida, Magness, Scott T., Yao, Qiuming, Beyaz, Semir, Arends, Mark, Denadai-Souza, Alexandre, Coburn, Lori A., Gaublomme, Jellert T., Baldock, Richard, Papatheodorou, Irene, Ordovas-Montanes, Jose, Boeckxstaens, Guy, Hupalowska, Anna, Teichmann, Sarah A., Regev, Aviv, Xavier, Ramnik J., Simmons, Alison, Snyder, Michael P., Wilson, Keith T.
Published in Nature reviews. Gastroenterology & hepatology (01.09.2023)
Published in Nature reviews. Gastroenterology & hepatology (01.09.2023)
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Journal Article
Somatic mutation as a mechanism of Wnt/β-catenin pathway activation in CLL
Wang, Lili, Shalek, Alex K., Lawrence, Mike, Ding, Ruihua, Gaublomme, Jellert T., Pochet, Nathalie, Stojanov, Petar, Sougnez, Carrie, Shukla, Sachet A., Stevenson, Kristen E., Zhang, Wandi, Wong, Jessica, Sievers, Quinlan L., MacDonald, Bryan T., Vartanov, Alexander R., Goldstein, Natalie R., Neuberg, Donna, He, Xi, Lander, Eric, Hacohen, Nir, Regev, Aviv, Getz, Gad, Brown, Jennifer R., Park, Hongkun, Wu, Catherine J.
Published in Blood (14.08.2014)
Published in Blood (14.08.2014)
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Journal Article
Identification and characterization of latency-associated peptide-expressing γδ T cells
Rezende, Rafael M., da Cunha, Andre P., Kuhn, Chantal, Rubino, Stephen, M’Hamdi, Hanane, Gabriely, Galina, Vandeventer, Tyler, Liu, Shirong, Cialic, Ron, Pinheiro-Rosa, Natalia, Oliveira, Rafael P., Gaublomme, Jellert T., Obholzer, Nikolaus, Kozubek, James, Pochet, Nathalie, Faria, Ana M. C., Weiner, Howard L.
Published in Nature communications (08.12.2015)
Published in Nature communications (08.12.2015)
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Journal Article
Dynamic regulatory network controlling TH17 cell differentiation
Yosef, Nir, Shalek, Alex K., Gaublomme, Jellert T., Jin, Hulin, Lee, Youjin, Awasthi, Amit, Wu, Chuan, Karwacz, Katarzyna, Xiao, Sheng, Jorgolli, Marsela, Gennert, David, Satija, Rahul, Shakya, Arvind, Lu, Diana Y., Trombetta, John J., Pillai, Meenu R., Ratcliffe, Peter J., Coleman, Mathew L., Bix, Mark, Tantin, Dean, Park, Hongkun, Kuchroo, Vijay K., Regev, Aviv
Published in Nature (London) (25.04.2013)
Published in Nature (London) (25.04.2013)
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Journal Article
CRISPRmap: Sequencing-free optical pooled screens mapping multi-omic phenotypes in cells and tissue
Gu, Jiacheng, Iyer, Abhishek, Wesley, Ben, Taglialatela, Angelo, Leuzzi, Giuseppe, Hangai, Sho, Decker, Aubrianna, Gu, Ruoyu, Klickstein, Naomi, Shuai, Yuanlong, Jankovic, Kristina, Parker-Burns, Lucy, Jin, Yinuo, Zhang, Jia Yi, Hong, Justin, Niu, Steve, Chou, Jacqueline, Landau, Dan A, Azizi, Elham, Chan, Edmond M, Ciccia, Alberto, Gaublomme, Jellert T
Published in bioRxiv (26.12.2023)
Published in bioRxiv (26.12.2023)
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Dynamic regulatory network controlling T^sub H^17 cell differentiation
Yosef, Nir, Shalek, Alex K, Gaublomme, Jellert T, Jin, Hulin, Lee, Youjin, Awasthi, Amit, Wu, Chuan, Karwacz, Katarzyna, Xiao, Sheng, Jorgolli, Marsela, Gennert, David, Satija, Rahul, Shakya, Arvind, Lu, Diana Y, Trombetta, John J, Pillai, Meenu R, Ratcliffe, Peter J, Coleman, Mathew L, Bix, Mark, Tantin, Dean, Park, Hongkun, Kuchroo, Vijay K, Regev, Aviv
Published in Nature (London) (25.04.2013)
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Published in Nature (London) (25.04.2013)
Journal Article
Dynamic regulatory network controlling [T.sub.H]17 cell differentiation
Yosef, Nir, Shalek, Alex K, Gaublomme, Jellert T, Jin, Hulin, Lee, Youjin, Awasthi, Amit, Wu, Chuan, Karwacz, Katarzyna, Xiao, Sheng, Jorgolli, Marsela, Gennert, David, Satija, Rahul, Shakya, Arvind, Lu, Diana Y, Trombetta, John J, Pillai, Meenu R, Ratcliffe, Peter J, Coleman, Mathew L, Bix, Mark, Tantin, Dean, Park, Hongkun, Kuchroo, Vijay K, Regev, Aviv
Published in Nature (London) (25.04.2013)
Published in Nature (London) (25.04.2013)
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Journal Article
Identification and characterization of latency-associated peptide-expressing [gamma][delta] T cells
Rezende, Rafael M, Da Cunha, Andre P, Kuhn, Chantal, Rubino, Stephen, M'hamdi, Hanane, Gabriely, Galina, Vandeventer, Tyler, Liu, Shirong, Cialic, Ron, Pinheiro-rosa, Natalia, Oliveira, Rafael P, Gaublomme, Jellert T, Obholzer, Nikolaus, Kozubek, James, Pochet, Nathalie, Faria, Ana M C, Weiner, Howard L
Published in Nature communications (01.12.2015)
Published in Nature communications (01.12.2015)
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Journal Article
Most axonal mitochondria in cortical pyramidal neurons lack mitochondrial DNA and consume ATP
Hirabayashi, Yusuke, Lewis, Jr, Tommy L, Du, Yudan, Virga, Daniel M, Decker, Aubrianna M, Coceano, Giovanna, Alvelid, Jonatan, Paul, Maëla A, Hamilton, Stevie, Kneis, Parker, Takahashi, Yasufumi, Gaublomme, Jellert T, Testa, Ilaria, Polleux, Franck
Published in bioRxiv : the preprint server for biology (13.02.2024)
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Published in bioRxiv : the preprint server for biology (13.02.2024)
Journal Article
Most axonal mitochondria in cortical pyramidal neurons lack mitochondrial DNA and consume ATP
Hirabayashi, Yusuke, Lewis, Tommy L, Du, Yudan, Virga, Daniel M, Decker, Aubrianna, Coceano, Giovanna, Alvelid, Jonatan, Maela, Paul, Hamilton, Stevie, Parker Kneis, Takahashi, Yasufumi, Gaublomme, Jellert, Testa, Ilaria, Polleux, Franck
Published in bioRxiv (13.02.2024)
Published in bioRxiv (13.02.2024)
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