Accurate estimation of cell composition in bulk expression through robust integration of single-cell information
Jew, Brandon, Alvarez, Marcus, Rahmani, Elior, Miao, Zong, Ko, Arthur, Garske, Kristina M., Sul, Jae Hoon, Pietiläinen, Kirsi H., Pajukanta, Päivi, Halperin, Eran
Published in Nature communications (24.04.2020)
Published in Nature communications (24.04.2020)
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Characterizing the landscape of gene expression variance in humans
Wolf, Scott, Melo, Diogo, Garske, Kristina M, Pallares, Luisa F, Lea, Amanda J, Ayroles, Julien F
Published in PLoS genetics (06.07.2023)
Published in PLoS genetics (06.07.2023)
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Phenotype-Specific Enrichment of Mendelian Disorder Genes near GWAS Regions across 62 Complex Traits
Freund, Malika Kumar, Burch, Kathryn S., Shi, Huwenbo, Mancuso, Nicholas, Kichaev, Gleb, Garske, Kristina M., Pan, David Z., Miao, Zong, Mohlke, Karen L., Laakso, Markku, Pajukanta, Päivi, Pasaniuc, Bogdan, Arboleda, Valerie A.
Published in American journal of human genetics (04.10.2018)
Published in American journal of human genetics (04.10.2018)
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Integration of human adipocyte chromosomal interactions with adipose gene expression prioritizes obesity-related genes from GWAS
Pan, David Z., Garske, Kristina M., Alvarez, Marcus, Bhagat, Yash V., Boocock, James, Nikkola, Elina, Miao, Zong, Raulerson, Chelsea K., Cantor, Rita M., Civelek, Mete, Glastonbury, Craig A., Small, Kerrin S., Boehnke, Michael, Lusis, Aldons J., Sinsheimer, Janet S., Mohlke, Karen L., Laakso, Markku, Pajukanta, Päivi, Ko, Arthur
Published in Nature communications (17.04.2018)
Published in Nature communications (17.04.2018)
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Increased body mass index is linked to systemic inflammation through altered chromatin co-accessibility in human preadipocytes
Garske, Kristina M., Kar, Asha, Comenho, Caroline, Balliu, Brunilda, Pan, David Z., Bhagat, Yash V., Rosenberg, Gregory, Koka, Amogha, Das, Sankha Subhra, Miao, Zong, Sinsheimer, Janet S., Kaprio, Jaakko, Pietiläinen, Kirsi H., Pajukanta, Päivi
Published in Nature communications (14.07.2023)
Published in Nature communications (14.07.2023)
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Long-range chromosomal interactions increase and mark repressed gene expression during adipogenesis
Garske, Kristina M, Comenho, Caroline, Pan, David Z, Alvarez, Marcus, Mohlke, Karen, Laakso, Markku, Pietiläinen, Kirsi H, Pajukanta, Päivi
Published in Epigenetics (01.12.2022)
Published in Epigenetics (01.12.2022)
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Publisher Correction: Accurate estimation of cell composition in bulk expression through robust integration of single-cell information
Jew, Brandon, Alvarez, Marcus, Rahmani, Elior, Miao, Zong, Ko, Arthur, Garske, Kristina M., Sul, Jae Hoon, Pietiläinen, Kirsi H., Pajukanta, Päivi, Halperin, Eran
Published in Nature communications (03.06.2020)
Published in Nature communications (03.06.2020)
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Identification of TBX15 as an adipose master trans regulator of abdominal obesity genes
Pan, David Z, Miao, Zong, Comenho, Caroline, Rajkumar, Sandhya, Koka, Amogha, Lee, Seung Hyuk T, Alvarez, Marcus, Kaminska, Dorota, Ko, Arthur, Sinsheimer, Janet S, Mohlke, Karen L, Mancuso, Nicholas, Muñoz-Hernandez, Linda Liliana, Herrera-Hernandez, Miguel, Tusié-Luna, Maria Teresa, Aguilar-Salinas, Carlos, Pietiläinen, Kirsi H, Pihlajamäki, Jussi, Laakso, Markku, Garske, Kristina M, Pajukanta, Päivi
Published in Genome medicine (02.08.2021)
Published in Genome medicine (02.08.2021)
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Age-dependent genes in adipose stem and precursor cells affect regulation of fat cell differentiation and link aging to obesity via cellular and genetic interactions
Kar, Asha, Alvarez, Marcus, Garske, Kristina M, Huang, Huiling, Lee, Seung Hyuk T, Deal, Milena, Das, Sankha Subhra, Koka, Amogha, Jamal, Zoeb, Mohlke, Karen L, Laakso, Markku, Heinonen, Sini, Pietiläinen, Kirsi H, Pajukanta, Päivi
Published in Genome medicine (31.01.2024)
Published in Genome medicine (31.01.2024)
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Identification of 90 NAFLD GWAS loci and establishment of NAFLD PRS and causal role of NAFLD in coronary artery disease
Miao, Zong, Garske, Kristina M., Pan, David Z., Koka, Amogha, Kaminska, Dorota, Männistö, Ville, Sinsheimer, Janet S., Pihlajamäki, Jussi, Pajukanta, Päivi
Published in HGG advances (13.01.2022)
Published in HGG advances (13.01.2022)
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Novel Lipid Long Intervening Noncoding RNA, Oligodendrocyte Maturation‐Associated Long Intergenic Noncoding RNA, Regulates the Liver Steatosis Gene Stearoyl‐Coenzyme A Desaturase As an Enhancer RNA
Benhammou, Jihane N., Ko, Arthur, Alvarez, Marcus, Kaikkonen, Minna U., Rankin, Carl, Garske, Kristina M., Padua, David, Bhagat, Yash, Kaminska, Dorota, Kärjä, Vesa, Pihlajamäki, Jussi, Pisegna, Joseph R., Pajukanta, Päivi
Published in Hepatology communications (01.10.2019)
Published in Hepatology communications (01.10.2019)
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Correction to: Identification of TBX15 as an adipose master trans regulator of abdominal obesity genes
Pan, David Z, Miao, Zong, Comenho, Caroline, Rajkumar, Sandhya, Koka, Amogha, Lee, Seung Hyuk T, Alvarez, Marcus, Kaminska, Dorota, Ko, Arthur, Sinsheimer, Janet S, Mohlke, Karen L, Mancuso, Nicholas, Muéoz-Hernandez, Linda Liliana, Herrera-Hernandez, Miguel, Tusié-Luna, Maria Teresa, Aguilar-Salinas, Carlos, Pietiläinen, Kirsi H, Pihlajamäki, Jussi, Laakso, Markku, Garske, Kristina M, Pajukanta, Päivi
Published in Genome medicine (30.08.2021)
Published in Genome medicine (30.08.2021)
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Journal Article
Author Correction: Integration of human adipocyte chromosomal interactions with adipose gene expression prioritizes obesity-related genes from GWAS
Pan, David Z., Garske, Kristina M., Alvarez, Marcus, Bhagat, Yash V., Boocock, James, Nikkola, Elina, Miao, Zong, Raulerson, Chelsea K., Cantor, Rita M., Civelek, Mete, Glastonbury, Craig A., Small, Kerrin S., Boehnke, Michael, Lusis, Aldons J., Sinsheimer, Janet S., Mohlke, Karen L., Laakso, Markku, Pajukanta, Päivi, Ko, Arthur
Published in Nature communications (22.08.2018)
Published in Nature communications (22.08.2018)
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Infrared Observations of the Candidate LBV 1806-20 and Nearby Cluster Stars
Eikenberry, S. S, Matthews, K, LaVine, J. L, Garske, M. A, Hu, D, Jackson, M. A, Patel, S. G, Barry, D. J, Colonno, M. R, Houck, J. R, Wilson, J. C, Corbel, S, Smith, J. D
Published in The Astrophysical journal (20.11.2004)
Published in The Astrophysical journal (20.11.2004)
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Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
Alvarez, Marcus, Rahmani, Elior, Jew, Brandon, Garske, Kristina M., Miao, Zong, Benhammou, Jihane N., Ye, Chun Jimmie, Pisegna, Joseph R., Pietiläinen, Kirsi H., Halperin, Eran, Pajukanta, Päivi
Published in Scientific reports (03.07.2020)
Published in Scientific reports (03.07.2020)
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Integrative analysis of liver-specific non-coding regulatory SNPs associated with the risk of coronary artery disease
Selvarajan, Ilakya, Toropainen, Anu, Garske, Kristina M., López Rodríguez, Maykel, Ko, Arthur, Miao, Zong, Kaminska, Dorota, Õunap, Kadri, Örd, Tiit, Ravindran, Aarthi, Liu, Oscar H., Moreau, Pierre R., Jawahar Deen, Ashik, Männistö, Ville, Pan, Calvin, Levonen, Anna-Liisa, Lusis, Aldons J., Heikkinen, Sami, Romanoski, Casey E., Pihlajamäki, Jussi, Pajukanta, Päivi, Kaikkonen, Minna U.
Published in American journal of human genetics (04.03.2021)
Published in American journal of human genetics (04.03.2021)
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Further evidence supporting a potential role for ADH1B in obesity
Morales, Liza D., Cromack, Douglas T., Tripathy, Devjit, Fourcaudot, Marcel, Kumar, Satish, Curran, Joanne E., Carless, Melanie, Göring, Harald H. H., Hu, Shirley L., Lopez-Alvarenga, Juan Carlos, Garske, Kristina M., Pajukanta, Päivi, Small, Kerrin S., Glastonbury, Craig A., Das, Swapan K., Langefeld, Carl, Hanson, Robert L., Hsueh, Wen-Chi, Norton, Luke, Arya, Rector, Mummidi, Srinivas, Blangero, John, DeFronzo, Ralph A., Duggirala, Ravindranath, Jenkinson, Christopher P.
Published in Scientific reports (21.01.2021)
Published in Scientific reports (21.01.2021)
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Single nucleus RNA-sequencing integrated into risk variant colocalization discovers 17 cell-type-specific abdominal obesity genes for metabolic dysfunction-associated steatotic liver disease
Lee, Seung Hyuk T., Garske, Kristina M., Arasu, Uma Thanigai, Kar, Asha, Miao, Zong, Alvarez, Marcus, Koka, Amogha, Darci-Maher, Nicholas, Benhammou, Jihane N., Pan, David Z., Örd, Tiit, Kaminska, Dorota, Männistö, Ville, Heinonen, Sini, Wabitsch, Martin, Laakso, Markku, Agopian, Vatche G., Pisegna, Joseph R., Pietiläinen, Kirsi H., Pihlajamäki, Jussi, Kaikkonen, Minna U., Pajukanta, Päivi
Published in EBioMedicine (01.08.2024)
Published in EBioMedicine (01.08.2024)
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Possible Infrared Counterparts to the Soft Gamma-Ray Repeater SGR 1806–20
Eikenberry, S. S, Garske, M. A, Hu, D, Jackson, M. A, Patel, S. G, Barry, D. J, Colonno, M. R, Houck, J. R
Published in The Astrophysical journal (20.12.2001)
Published in The Astrophysical journal (20.12.2001)
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