Functional linkage of gene fusions to cancer cell fitness assessed by pharmacological and CRISPR-Cas9 screening
Picco, Gabriele, Chen, Elisabeth D, Alonso, Luz Garcia, Behan, Fiona M, Gonçalves, Emanuel, Bignell, Graham, Matchan, Angela, Fu, Beiyuan, Banerjee, Ruby, Anderson, Elizabeth, Butler, Adam, Benes, Cyril H, McDermott, Ultan, Dow, David, Iorio, Francesco, Stronach, Euan, Yang, Fengtang, Yusa, Kosuke, Saez-Rodriguez, Julio, Garnett, Mathew J
Published in Nature communications (16.05.2019)
Published in Nature communications (16.05.2019)
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Journal Article
Human gonadal development, cell by cell
Lorenzi, Valentina, Vento‐Tormo, Roser, Garcia‐Alonso, Luz
Published in Clinical and translational medicine (01.12.2022)
Published in Clinical and translational medicine (01.12.2022)
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Journal Article
The role of the interactome in the maintenance of deleterious variability in human populations
Garcia‐Alonso, Luz, Jiménez‐Almazán, Jorge, Carbonell‐Caballero, Jose, Vela‐Boza, Alicia, Santoyo‐López, Javier, Antiñolo, Guillermo, Dopazo, Joaquin
Published in Molecular systems biology (01.09.2014)
Published in Molecular systems biology (01.09.2014)
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Journal Article
The functional landscape of the human phosphoproteome
Ochoa, David, Jarnuczak, Andrew F, Viéitez, Cristina, Gehre, Maja, Soucheray, Margaret, Mateus, André, Kleefeldt, Askar A, Hill, Anthony, Garcia-Alonso, Luz, Stein, Frank, Krogan, Nevan J, Savitski, Mikhail M, Swaney, Danielle L, Vizcaíno, Juan A, Noh, Kyung-Min, Beltrao, Pedro
Published in Nature biotechnology (01.03.2020)
Published in Nature biotechnology (01.03.2020)
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Journal Article
A Pan-Cancer Catalogue of Cancer Driver Protein Interaction Interfaces
Porta-Pardo, Eduard, Garcia-Alonso, Luz, Hrabe, Thomas, Dopazo, Joaquin, Godzik, Adam
Published in PLoS computational biology (01.10.2015)
Published in PLoS computational biology (01.10.2015)
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Journal Article
Transcription Factor Activities Enhance Markers of Drug Sensitivity in Cancer
Garcia-Alonso, Luz, Iorio, Francesco, Matchan, Angela, Fonseca, Nuno, Jaaks, Patricia, Peat, Gareth, Pignatelli, Miguel, Falcone, Fiammetta, Benes, Cyril H, Dunham, Ian, Bignell, Graham, McDade, Simon S, Garnett, Mathew J, Saez-Rodriguez, Julio
Published in Cancer research (Chicago, Ill.) (01.02.2018)
Published in Cancer research (Chicago, Ill.) (01.02.2018)
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Journal Article
Single-cell roadmap of human gonadal development
Garcia-Alonso, Luz, Lorenzi, Valentina, Mazzeo, Cecilia Icoresi, Alves-Lopes, João Pedro, Roberts, Kenny, Sancho-Serra, Carmen, Engelbert, Justin, Marečková, Magda, Gruhn, Wolfram H, Botting, Rachel A, Li, Tong, Crespo, Berta, van Dongen, Stijn, Kiselev, Vladimir Yu, Prigmore, Elena, Herbert, Mary, Moffett, Ashley, Chédotal, Alain, Bayraktar, Omer Ali, Surani, Azim, Haniffa, Muzlifah, Vento-Tormo, Roser
Published in Nature (London) (21.07.2022)
Published in Nature (London) (21.07.2022)
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Journal Article
Spatial multiomics map of trophoblast development in early pregnancy
Arutyunyan, Anna, Roberts, Kenny, Troulé, Kevin, Wong, Frederick C K, Sheridan, Megan A, Kats, Ilia, Garcia-Alonso, Luz, Velten, Britta, Hoo, Regina, Ruiz-Morales, Elias R, Sancho-Serra, Carmen, Shilts, Jarrod, Handfield, Louis-Francois, Marconato, Luca, Tuck, Elizabeth, Gardner, Lucy, Mazzeo, Cecilia Icoresi, Li, Qian, Kelava, Iva, Wright, Gavin J, Prigmore, Elena, Teichmann, Sarah A, Bayraktar, Omer Ali, Moffett, Ashley, Stegle, Oliver, Turco, Margherita Y, Vento-Tormo, Roser
Published in Nature (London) (06.04.2023)
Published in Nature (London) (06.04.2023)
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Journal Article
Web-based network analysis and visualization using CellMaps
Salavert, Francisco, García-Alonso, Luz, Sánchez, Rubén, Alonso, Roberto, Bleda, Marta, Medina, Ignacio, Dopazo, Joaquín
Published in Bioinformatics (Oxford, England) (01.10.2016)
Published in Bioinformatics (Oxford, England) (01.10.2016)
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Journal Article
Genome-wide chemical mutagenesis screens allow unbiased saturation of the cancer genome and identification of drug resistance mutations
Brammeld, Jonathan S, Petljak, Mia, Martincorena, Inigo, Williams, Steven P, Alonso, Luz Garcia, Dalmases, Alba, Bellosillo, Beatriz, Robles-Espinoza, Carla Daniela, Price, Stacey, Barthorpe, Syd, Tarpey, Patrick, Alifrangis, Constantine, Bignell, Graham, Vidal, Joana, Young, Jamie, Stebbings, Lucy, Beal, Kathryn, Stratton, Michael R, Saez-Rodriguez, Julio, Garnett, Mathew, Montagut, Clara, Iorio, Francesco, McDermott, Ultan
Published in Genome research (01.04.2017)
Published in Genome research (01.04.2017)
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Journal Article
The Mutational Landscape of Acute Promyelocytic Leukemia Reveals an Interacting Network of Co-Occurrences and Recurrent Mutations
Ibáñez, Mariam, Carbonell-Caballero, José, García-Alonso, Luz, Such, Esperanza, Jiménez-Almazán, Jorge, Vidal, Enrique, Barragán, Eva, López-Pavía, María, LLop, Marta, Martín, Iván, Gómez-Seguí, Inés, Montesinos, Pau, Sanz, Miguel A, Dopazo, Joaquín, Cervera, José
Published in PloS one (17.02.2016)
Published in PloS one (17.02.2016)
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Journal Article
Pathogenic variants in the human m6A reader YTHDC2 are associated with primary ovarian insufficiency
McGlacken-Byrne, Sinéad M, Del Valle, Ignacio, Quesne Stabej, Polona Le, Bellutti, Laura, Garcia-Alonso, Luz, Ocaka, Louise A, Ishida, Miho, Suntharalingham, Jenifer P, Gagunashvili, Andrey, Ogunbiyi, Olumide K, Mistry, Talisa, Buonocore, Federica, Crespo, Berta, Moreno, Nadjeda, Niola, Paola, Brooks, Tony, Brain, Caroline E, Dattani, Mehul T, Kelberman, Daniel, Vento-Tormo, Roser, Lagos, Carlos F, Livera, Gabriel, Conway, Gerard S, Achermann, John C
Published in JCI insight (08.03.2022)
Published in JCI insight (08.03.2022)
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Journal Article
The modular network structure of the mutational landscape of Acute Myeloid Leukemia
Ibáñez, Mariam, Carbonell-Caballero, José, Such, Esperanza, García-Alonso, Luz, Liquori, Alessandro, López-Pavía, María, Llop, Marta, Alonso, Carmen, Barragán, Eva, Gómez-Seguí, Inés, Neef, Alexander, Hervás, David, Montesinos, Pau, Sanz, Guillermo, Sanz, Miguel Angel, Dopazo, Joaquín, Cervera, José
Published in PloS one (10.10.2018)
Published in PloS one (10.10.2018)
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Journal Article
A novel resource to study endometriosis at the single-cell level
García-Alonso, Luz, Zondervan, Krina T, Vento-Tormo, Roser
Published in Nature reviews. Endocrinology (01.05.2023)
Published in Nature reviews. Endocrinology (01.05.2023)
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Journal Article
Four new loci associations discovered by pathway-based and network analyses of the genome-wide variability profile of Hirschsprung's disease
Fernández, Raquel Ma, Bleda, Marta, Núñez-Torres, Rocío, Medina, Ignacio, Luzón-Toro, Berta, García-Alonso, Luz, Torroglosa, Ana, Marbà, Martina, Enguix-Riego, Ma Valle, Montaner, David, Antiñolo, Guillermo, Dopazo, Joaquín, Borrego, Salud
Published in Orphanet journal of rare diseases (28.12.2012)
Published in Orphanet journal of rare diseases (28.12.2012)
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Journal Article
Deciphering intrafamilial phenotypic variability by exome sequencing in a Bardet–Biedl family
González‐del Pozo, María, Méndez‐Vidal, Cristina, Santoyo‐Lopez, Javier, Vela‐Boza, Alicia, Bravo‐Gil, Nereida, Rueda, Antonio, García‐Alonso, Luz, Vázquez‐Marouschek, Carmen, Dopazo, Joaquín, Borrego, Salud, Antiñolo, Guillermo
Published in Molecular genetics & genomic medicine (01.03.2014)
Published in Molecular genetics & genomic medicine (01.03.2014)
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Journal Article
PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins
Minguez, Pablo, Letunic, Ivica, Parca, Luca, Garcia-Alonso, Luz, Dopazo, Joaquin, Huerta-Cepas, Jaime, Bork, Peer
Published in Nucleic acids research (28.01.2015)
Published in Nucleic acids research (28.01.2015)
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Journal Article
Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro
Garcia-Alonso, Luz, Handfield, Louis-François, Roberts, Kenny, Nikolakopoulou, Konstantina, Fernando, Ridma C, Gardner, Lucy, Woodhams, Benjamin, Arutyunyan, Anna, Polanski, Krzysztof, Hoo, Regina, Sancho-Serra, Carmen, Li, Tong, Kwakwa, Kwasi, Tuck, Elizabeth, Lorenzi, Valentina, Massalha, Hassan, Prete, Martin, Kleshchevnikov, Vitalii, Tarkowska, Aleksandra, Porter, Tarryn, Mazzeo, Cecilia Icoresi, van Dongen, Stijn, Dabrowska, Monika, Vaskivskyi, Vasyl, Mahbubani, Krishnaa T, Park, Jong-Eun, Jimenez-Linan, Mercedes, Campos, Lia, Kiselev, Vladimir Yu, Lindskog, Cecilia, Ayuk, Paul, Prigmore, Elena, Stratton, Michael R, Saeb-Parsy, Kourosh, Moffett, Ashley, Moore, Luiza, Bayraktar, Omer A, Teichmann, Sarah A, Turco, Margherita Y, Vento-Tormo, Roser
Published in Nature genetics (01.12.2021)
Published in Nature genetics (01.12.2021)
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