Block-Diagonal Covariance Selection for High-Dimensional Gaussian Graphical Models
Devijver, Emilie, Gallopin, Mélina
Published in Journal of the American Statistical Association (02.01.2018)
Published in Journal of the American Statistical Association (02.01.2018)
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Journal Article
A Phylogenetic Framework to Simulate Synthetic Interspecies RNA-Seq Data
Bastide, Paul, Soneson, Charlotte, Stern, David B, Lespinet, Olivier, Gallopin, Mélina
Published in Molecular biology and evolution (04.01.2023)
Published in Molecular biology and evolution (04.01.2023)
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Journal Article
DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition
Audoux, Jérôme, Philippe, Nicolas, Chikhi, Rayan, Salson, Mikaël, Gallopin, Mélina, Gabriel, Marc, Le Coz, Jérémy, Drouineau, Emilie, Commes, Thérèse, Gautheret, Daniel
Published in Genome Biology (28.12.2017)
Published in Genome Biology (28.12.2017)
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Journal Article
Additional insights into the organization of transcriptional regulatory modules based on a 3D model of the Saccharomyces cerevisiae genome
Poinsignon, Thibault, Gallopin, Mélina, Camadro, Jean-Michel, Poulain, Pierre, Lelandais, Gaëlle
Published in BMC research notes (19.02.2022)
Published in BMC research notes (19.02.2022)
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Journal Article
Data-based filtering for replicated high-throughput transcriptome sequencing experiments
Rau, Andrea, Gallopin, Mélina, Celeux, Gilles, Jaffrézic, Florence
Published in Bioinformatics (01.09.2013)
Published in Bioinformatics (01.09.2013)
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Journal Article
Reference-free transcriptome signatures for prostate cancer prognosis
Nguyen, Ha T N, Xue, Haoliang, Firlej, Virginie, Ponty, Yann, Gallopin, Melina, Gautheret, Daniel
Published in BMC cancer (12.04.2021)
Published in BMC cancer (12.04.2021)
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Journal Article
The contribution of uncharted RNA sequences to tumor identity in lung adenocarcinoma
Wang, Yunfeng, Xue, Haoliang, Aglave, Marine, Lainé, Antoine, Gallopin, Mélina, Gautheret, Daniel
Published in NAR cancer (01.03.2022)
Published in NAR cancer (01.03.2022)
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Journal Article
KaMRaT: a C++ toolkit for k-mer count matrix dimension reduction
Xue, Haoliang, Gallopin, Mélina, Marchet, Camille, Nguyen, Ha N, Wang, Yunfeng, Lainé, Antoine, Bessiere, Chloé, Gautheret, Daniel
Published in Bioinformatics (Oxford, England) (04.03.2024)
Published in Bioinformatics (Oxford, England) (04.03.2024)
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Journal Article
Reference-free transcriptome exploration reveals novel RNAs for prostate cancer diagnosis
Pinskaya, Marina, Saci, Zohra, Gallopin, Mélina, Gabriel, Marc, Nguyen, Ha Tn, Firlej, Virginie, Descrimes, Marc, Rapinat, Audrey, Gentien, David, Taille, Alexandre de la, Londoño-Vallejo, Arturo, Allory, Yves, Gautheret, Daniel, Morillon, Antonin
Published in Life science alliance (01.12.2019)
Published in Life science alliance (01.12.2019)
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Journal Article
Reference-free transcriptome signatures for prostate cancer prognosis
Nguyen, Ha T.N., Xue, Haoliang, Firlej, Virginie, Ponty, Yann, Gallopin, Melina, Gautheret, Daniel
Published in BMC cancer (01.12.2021)
Published in BMC cancer (01.12.2021)
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Journal Article